Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 0.0e+00 2065.0 1026 100.0
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 0.0e+00 1464.9 1028 70.9
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 0.0e+00 1348.6 1041 66.2
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1276.5 1045 62.0
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1258.8 1045 61.1
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1238.4 1033 60.5
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1236.9 1042 60.1
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1236.1 1040 60.6
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1229.2 1039 60.0
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1222.6 1038 60.4
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 0.0e+00 1215.3 1029 58.7
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 0.0e+00 1200.7 1000 59.4
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1196.4 1036 58.5
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 0.0e+00 1192.6 1041 58.8
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 0.0e+00 1176.8 1041 56.8
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 0.0e+00 1172.9 1042 57.7
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1171.0 1017 58.0
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1170.6 1046 57.3
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1167.9 1034 58.1
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 0.0e+00 1164.8 1036 56.2
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 0.0e+00 1159.8 1041 56.7
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 0.0e+00 1159.1 1042 55.5
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1158.3 1043 55.9
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1157.1 1039 56.1
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1155.2 1043 55.8
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1154.4 1043 55.5
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 0.0e+00 1146.3 993 56.9
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1145.6 1061 56.4
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 0.0e+00 1145.2 1056 54.7
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 0.0e+00 1144.4 1052 54.5
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1139.4 1041 55.3
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1123.6 1060 55.3
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 0.0e+00 1120.1 818 69.8
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 0.0e+00 1117.4 1044 54.4
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 0.0e+00 1116.3 1045 55.6
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 0.0e+00 1115.9 1073 54.4
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 0.0e+00 1113.2 996 56.2
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 0.0e+00 1112.4 1028 54.6
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 0.0e+00 1103.6 1028 53.6
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 0.0e+00 1100.5 1041 54.8
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 0.0e+00 1098.6 1021 55.3
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 0.0e+00 1078.5 1050 53.5
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 5.0e-308 1061.2 1166 48.6
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 4.4e-304 1048.1 1041 52.9
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 1.5e-301 1039.6 919 56.3
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 6.7e-297 1024.2 1034 51.9
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 7.4e-296 1020.8 1020 52.3
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 1.7e-295 1019.6 1050 50.0
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 2.2e-295 1019.2 1027 53.5
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 1.2e-285 986.9 870 56.3
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 2.0e-285 986.1 924 55.8
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 4.7e-282 974.9 1032 50.0
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 1.3e-279 966.8 890 55.7
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 1.3e-279 966.8 841 57.2
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 2.0e-277 959.5 1047 49.5
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 7.7e-277 957.6 1080 47.6
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 3.3e-275 952.2 870 54.9
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 2.4e-270 936.0 870 54.0
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 8.6e-268 927.5 906 52.8
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 6.4e-247 858.2 1055 45.1
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 4.1e-246 855.5 766 56.7
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 1.4e-241 840.5 765 55.7
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 3.0e-236 822.8 766 54.8
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 2.3e-228 796.6 738 55.7
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 3.1e-217 759.6 740 52.8
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 1.1e-206 724.5 1018 39.9
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 9.3e-206 721.5 1111 38.3
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 1.3e-199 701.0 644 55.7
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 1.6e-189 667.5 1108 36.4
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 4.8e-186 656.0 677 51.7
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 3.1e-169 600.1 481 58.8
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 5.9e-160 569.3 460 60.0
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 3.9e-151 540.0 523 54.5
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 6.6e-151 539.3 520 53.8
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 9.2e-129 465.7 460 52.8
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 4.3e-110 403.7 280 68.2
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 5.3e-108 396.7 352 54.8
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.2e-107 395.6 371 55.3
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 5.8e-99 366.7 490 43.5
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 1.4e-97 362.1 284 64.1
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 1.4e-89 335.5 281 56.9
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.3e-87 328.2 355 48.7
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 2.8e-85 321.2 231 65.4
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 2.3e-79 301.6 241 62.2
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 5.7e-78 297.0 307 51.5
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 2.2e-77 295.0 234 61.5
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 7.2e-73 280.0 206 65.0
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.2e-69 268.5 328 46.3
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 1.6e-48 199.1 139 69.1
Cfa016638 Carpinus fangiana HOM05D007235 ORTHO05D008985 8.0e-32 143.7 181 45.9
RcHm_v2.0_Chr3g0474631 Rosa chinensis HOM05D007235 ORTHO05D008985 2.0e-30 139.0 99 69.7
Migut.J01007 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.2e-22 113.2 93 67.7
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 2.9e-21 108.6 908 21.7
AagrBONN_evm.TU.Sc2ySwM_228.1996 Anthoceros agrestis HOM05D007235 ORTHO05D008985 2.7e-19 102.1 108 49.1
Ciclev10013621m.g Citrus clementina HOM05D007235 ORTHO05D008985 2.5e-17 95.5 86 53.5
GSVIVG01033881001 Vitis vinifera HOM05D007235 ORTHO05D008985 7.3e-17 94.0 86 55.8
RcHm_v2.0_Chr3g0474671 Rosa chinensis HOM05D007235 ORTHO05D008985 2.1e-16 92.4 86 54.7
Gorai.002G238400 Gossypium raimondii HOM05D007235 ORTHO05D008985 8.1e-16 90.5 87 52.9
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 5.2e-15 87.8 54 74.1
Thecc.05G094000 Theobroma cacao HOM05D007235 ORTHO05D008985 1.5e-14 86.3 86 51.2
Gohir.A01G204900 Gossypium hirsutum HOM05D007235 ORTHO05D008985 7.6e-14 84.0 87 51.7
ATR0820G010 Amborella trichopoda HOM05D007235 ORTHO05D008985 3.9e-10 71.6 85 43.5
SEGI_13044 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 1.1e-09 70.1 100 37.0


User provided reference genes

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