Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 4.2e-80 301.2 142 100.0
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.4e-72 275.4 142 93.0
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.1e-47 192.6 136 74.3
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.0e-34 149.4 135 58.5
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.8e-33 145.2 132 58.3
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 1.2e-21 107.1 135 44.4
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 6.3e-20 101.3 119 43.7
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.1e-19 100.5 107 48.6
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.5e-18 95.5 116 44.0
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 4.5e-18 95.1 143 41.3
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 4.5e-18 95.1 143 39.2
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 5.9e-18 94.7 141 41.1
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 1.2e-15 87.0 144 38.2
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 2.8e-15 85.9 145 35.9
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 3.6e-15 85.5 114 39.5
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 4.7e-15 85.1 116 40.5
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 4.7e-15 85.1 139 38.1
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 8.0e-15 84.3 134 34.3
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 1.0e-14 84.0 145 37.9
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 1.0e-14 84.0 150 36.7
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 1.8e-14 83.2 139 41.0
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 2.3e-14 82.8 124 40.3
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 2.3e-14 82.8 149 38.3
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 2.3e-14 82.8 123 39.0
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 3.0e-14 82.4 150 36.7
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 4.0e-14 82.0 141 36.9
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 4.0e-14 82.0 123 36.6
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 4.0e-14 82.0 104 43.3
Hund11407 Selenicereus undatus HOM05D002584 ORTHO05D002736 5.2e-14 81.6 106 43.4
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 6.8e-14 81.3 136 36.8
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 8.9e-14 80.9 119 41.2
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.2e-13 80.5 153 36.6
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 1.2e-13 80.5 151 36.4
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 1.2e-13 80.5 152 35.5
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 1.2e-13 80.5 134 38.8
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 1.5e-13 80.1 140 38.6
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 1.5e-13 80.1 144 33.3
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 2.0e-13 79.7 155 34.2
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 2.6e-13 79.3 143 35.0
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 2.6e-13 79.3 147 35.4
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 3.4e-13 79.0 151 34.4
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 4.4e-13 78.6 143 35.7
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 5.7e-13 78.2 147 34.0
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 5.7e-13 78.2 112 41.1
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 5.7e-13 78.2 139 34.5
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 7.5e-13 77.8 135 35.6
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 7.5e-13 77.8 146 35.6
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 7.5e-13 77.8 123 38.2
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 7.5e-13 77.8 146 34.2
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 7.5e-13 77.8 144 33.3
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 9.8e-13 77.4 114 39.5
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 9.8e-13 77.4 139 35.3
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 1.3e-12 77.0 147 35.4
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 1.7e-12 76.6 108 38.9
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 1.7e-12 76.6 118 35.6
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 1.7e-12 76.6 142 33.8
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-12 76.3 147 33.3
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-12 76.3 141 34.8
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 2.8e-12 75.9 141 36.9
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 2.8e-12 75.9 141 36.2
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 2.8e-12 75.9 148 37.8
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 2.8e-12 75.9 144 32.6
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 2.8e-12 75.9 114 38.6
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 3.7e-12 75.5 123 38.2
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 3.7e-12 75.5 123 38.2
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 3.7e-12 75.5 139 35.3
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 3.7e-12 75.5 140 32.1
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 3.7e-12 75.5 156 34.0
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 4.9e-12 75.1 138 35.5
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 4.9e-12 75.1 150 33.3
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 4.9e-12 75.1 150 35.3
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.9e-12 75.1 150 35.3
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.9e-12 75.1 150 35.3
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 6.3e-12 74.7 136 33.1
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 6.3e-12 74.7 140 32.1
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 8.3e-12 74.3 150 33.3
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 8.3e-12 74.3 164 32.9
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 8.3e-12 74.3 164 32.9
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 8.3e-12 74.3 151 33.8
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 8.3e-12 74.3 135 33.3
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 8.3e-12 74.3 113 37.2
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.1e-11 73.9 143 36.4
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 73.9 113 37.2
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 1.4e-11 73.6 154 31.2
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 1.4e-11 73.6 155 34.2
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 1.4e-11 73.6 154 33.1
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 1.4e-11 73.6 120 35.8
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 1.8e-11 73.2 114 37.7
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 1.8e-11 73.2 114 35.1
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 1.8e-11 73.2 141 34.0
Ah.07g206030 Amaranthus hybridus HOM05D002584 ORTHO05D002736 2.4e-11 72.8 132 34.8
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 2.4e-11 72.8 112 40.2
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 2.4e-11 72.8 123 35.0
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 2.4e-11 72.8 118 35.6
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 2.4e-11 72.8 141 34.0
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.1e-11 72.4 137 32.1
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-11 72.4 118 36.4
PSO764G0332 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-11 72.4 135 34.1
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-11 72.4 136 32.4
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 4.1e-11 72.0 139 34.5
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 4.1e-11 72.0 139 34.5
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 4.1e-11 72.0 143 30.8
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 4.1e-11 72.0 143 30.8
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 4.1e-11 72.0 139 35.3
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 5.4e-11 71.6 156 32.1
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 5.4e-11 71.6 141 33.3
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 7.0e-11 71.2 114 36.8
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 7.0e-11 71.2 122 32.8
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 7.0e-11 71.2 144 34.0
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 7.0e-11 71.2 141 32.6
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 7.0e-11 71.2 114 38.6
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 9.2e-11 70.9 118 33.1
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 9.2e-11 70.9 144 32.6
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 9.2e-11 70.9 114 37.7
Aqoxy7G01617 Aquilegia oxysepala HOM05D002584 ORTHO05D002736 1.2e-10 70.5 147 29.9
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 1.2e-10 70.5 136 33.8
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 1.6e-10 70.1 145 33.1
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 1.6e-10 70.1 152 35.5
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 2.0e-10 69.7 117 35.9
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 2.0e-10 69.7 139 36.0
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 2.0e-10 69.7 149 33.6
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 2.0e-10 69.7 138 33.3
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 2.7e-10 69.3 143 33.6
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 2.7e-10 69.3 143 33.6
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 2.7e-10 69.3 143 33.6
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 2.7e-10 69.3 143 33.6
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 2.7e-10 69.3 144 33.3
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 2.7e-10 69.3 145 31.0
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 2.7e-10 69.3 147 32.7
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 3.5e-10 68.9 119 33.6
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 5.9e-10 68.2 111 37.8
ECA246G4061 Erigeron canadensis HOM05D002584 ORTHO05D002736 5.9e-10 68.2 112 35.7
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 5.9e-10 68.2 138 32.6
EL10Ac5g12881 Beta vulgaris HOM05D002584 ORTHO05D002736 7.8e-10 67.8 139 32.4
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 7.8e-10 67.8 151 32.5
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 1.0e-09 67.4 120 33.3
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 1.0e-09 67.4 142 33.8
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 1.3e-09 67.0 107 36.4
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 1.7e-09 66.6 114 34.2
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 2.3e-09 66.2 117 34.2
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 2.9e-09 65.9 157 29.3
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-09 65.9 152 30.3
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 3.8e-09 65.5 103 35.9
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 3.8e-09 65.5 139 33.8
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 3.8e-09 65.5 149 32.2
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 3.8e-09 65.5 140 35.0
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 5.0e-09 65.1 115 33.0
HanXRQChr17g0535091 Helianthus annuus HOM05D002584 ORTHO05D002736 6.6e-09 64.7 129 29.5
PSO732G0349 Papaver somniferum HOM05D002584 ORTHO05D002736 8.6e-09 64.3 134 32.8
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 8.6e-09 64.3 152 29.6
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 8.6e-09 64.3 114 34.2
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 1.1e-08 63.9 140 32.1
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.5e-08 63.5 127 33.9
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.5e-08 63.5 139 28.1
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 2.5e-08 62.8 129 31.0
PSO675G5053 Papaver somniferum HOM05D002584 ORTHO05D002736 2.5e-08 62.8 183 28.4
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 3.3e-08 62.4 140 31.4
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 3.3e-08 62.4 93 41.9
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 3.3e-08 62.4 138 29.0
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.3e-08 62.4 115 32.2
TPR.G33314 Trifolium pratense HOM05D002584 ORTHO05D002736 3.3e-08 62.4 143 31.5
CAN.G1505.1 Capsicum annuum HOM05D002584 ORTHO05D002736 1.6e-07 60.1 136 32.4
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 2.1e-07 59.7 107 38.3
PSO732G0203 Papaver somniferum HOM05D002584 ORTHO05D002736 2.8e-07 59.3 106 34.0
Migut.A00682 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.6e-07 58.9 38 65.8
Medtr1g028850 Medicago truncatula HOM05D002584 ORTHO05D002736 3.6e-07 58.9 90 40.0
CAN.G792.51 Capsicum annuum HOM05D002584 ORTHO05D002736 4.7e-07 58.5 105 34.3
CAN.G792.61 Capsicum annuum HOM05D002584 ORTHO05D002736 4.7e-07 58.5 108 35.2
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 4.7e-07 58.5 138 28.3
ECA246G0735 Erigeron canadensis HOM05D002584 ORTHO05D002736 4.7e-07 58.5 107 30.8
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 6.1e-07 58.2 115 31.3
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 6.1e-07 58.2 137 27.7
Hma1.2p1_0952F.1_g240875 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 8.0e-07 57.8 57 43.9
Hma1.2p1_0952F.1_g240890 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 8.0e-07 57.8 57 43.9
CAN.G792.54 Capsicum annuum HOM05D002584 ORTHO05D002736 1.0e-06 57.4 114 34.2
CAN.G792.56 Capsicum annuum HOM05D002584 ORTHO05D002736 1.4e-06 57.0 112 33.9
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 1.4e-06 57.0 144 29.9
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.4e-06 57.0 117 31.6
Sed0024155 Sechium edule HOM05D002584 ORTHO05D002736 1.4e-06 57.0 139 28.1
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 3.0e-06 55.8 135 30.4


User provided reference genes

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