Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00912 Erythranthe guttata HOM05D000198 ORTHO05D003365 1.7e-31 138.7 67 100.0
Migut.N00165 Erythranthe guttata HOM05D000198 ORTHO05D003365 1.7e-31 138.7 67 100.0
Migut.D01906 Erythranthe guttata HOM05D000198 ORTHO05D003365 1.1e-11 72.8 35 97.1
SGA_v2.0_scaffold7G04110 Striga asiatica HOM05D000198 ORTHO05D003365 3.3e-11 71.2 35 94.3
MSTRG.9663 Avicennia marina HOM05D000198 ORTHO05D003365 1.6e-10 68.9 35 91.4
MSTRG.4388 Avicennia marina HOM05D000198 ORTHO05D003365 4.8e-10 67.4 35 88.6
SalBow3G4247 Salvia bowleyana HOM05D000198 ORTHO05D003365 1.8e-09 65.5 35 88.6
SalBow5G1824 Salvia bowleyana HOM05D000198 ORTHO05D003365 1.8e-09 65.5 35 85.7
MSTRG.11428 Avicennia marina HOM05D000198 ORTHO05D003365 3.1e-09 64.7 37 81.1
HanXRQChr05g0155461 Helianthus annuus HOM05D000198 ORTHO05D003365 9.0e-09 63.2 35 82.9
DCAR_016507 Daucus carota HOM05D000198 ORTHO05D003365 1.2e-08 62.8 35 82.9
unitig_60.g25414 Utricularia gibba HOM05D000198 ORTHO05D003365 1.5e-08 62.4 35 85.7
Cc04_g13600 Coffea canephora HOM05D000198 ORTHO05D003365 2.6e-08 61.6 35 77.1
Lsat_1_v5_gn_4_73580 Lactuca sativa HOM05D000198 ORTHO05D003365 2.6e-08 61.6 35 80.0
Sabra12G0053800 Salix brachista HOM05D000198 ORTHO05D003365 2.6e-08 61.6 35 82.9
ECA232G3153 Erigeron canadensis HOM05D002643 ORTHO05D003365 3.4e-08 61.2 35 80.0
AL5G27500 Arabidopsis lyrata HOM05D000198 ORTHO05D003365 5.8e-08 60.5 35 85.7
AT3G48170 Arabidopsis thaliana HOM05D000198 ORTHO05D003365 5.8e-08 60.5 35 85.7
Oeu005688.1 Olea europaea HOM05D000198 ORTHO05D003365 5.8e-08 60.5 35 80.0
Potri.012G075600 Populus trichocarpa HOM05D000198 ORTHO05D003365 5.8e-08 60.5 35 80.0
TWI60G0566 Tripterygium wilfordii HOM05D000198 ORTHO05D003365 7.6e-08 60.1 35 85.7
ClCG06G016680 Citrullus lanatus HOM05D000198 ORTHO05D003365 1.0e-07 59.7 35 80.0
Rhsim08G0167500 Rhododendron simsii HOM05D000198 ORTHO05D003365 1.0e-07 59.7 40 70.0
Rhsim08G0167700 Rhododendron simsii HOM05D000198 ORTHO05D003365 1.0e-07 59.7 40 70.0
MBI14_g15699_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D003365 1.3e-07 59.3 35 77.1
THA.LOC104818220 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 1.3e-07 59.3 37 75.7
Actinidia04957 Actinidia chinensis HOM05D000198 ORTHO05D003365 1.7e-07 58.9 35 77.1
TWI15G0338 Tripterygium wilfordii HOM05D000198 ORTHO05D003365 1.7e-07 58.9 35 82.9
HanXRQChr09g0271671 Helianthus annuus HOM05D000198 ORTHO05D003365 2.2e-07 58.5 35 77.1
Lsat_1_v5_gn_5_17920 Lactuca sativa HOM05D000198 ORTHO05D003365 2.2e-07 58.5 35 74.3
Aqoxy3G03122 Aquilegia oxysepala HOM05D000198 ORTHO05D003365 3.8e-07 57.8 35 77.1
Potri.015G070600 Populus trichocarpa HOM05D000198 ORTHO05D003365 3.8e-07 57.8 35 77.1
Sabra15G0094900 Salix brachista HOM05D000198 ORTHO05D003365 3.8e-07 57.8 35 77.1
Sabra15G0095800 Salix brachista HOM05D000198 ORTHO05D003365 3.8e-07 57.8 35 77.1
THA.LOC104821472 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 3.8e-07 57.8 37 73.0
MELO3C017125.2 Cucumis melo HOM05D000198 ORTHO05D003365 4.9e-07 57.4 35 80.0
Lj5C120T17 Lonicera japonica HOM05D000198 ORTHO05D003365 4.9e-07 57.4 35 74.3
vmacro19355 Vaccinium macrocarpon HOM05D000198 ORTHO05D003365 4.9e-07 57.4 40 67.5
MD14G1187300 Malus domestica HOM05D000198 ORTHO05D003365 6.5e-07 57.0 35 77.1
Mapoly0039s0054 Marchantia polymorpha HOM05D000198 ORTHO05D003365 6.5e-07 57.0 35 77.1
CDE06G2133 Ceratophyllum demersum HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 77.1
Ciclev10019800m.g Citrus clementina HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 77.1
FvH4_5g16350 Fragaria vesca HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
FAN04G2709 Fragaria x ananassa HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
FAN13G0689 Fragaria x ananassa HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
FAN18G3532 Fragaria x ananassa HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
Nn4g22927 Nelumbo nucifera HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 74.3
PSO339G4870 Papaver somniferum HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
RcHm_v2.0_Chr7g0179781 Rosa chinensis HOM05D000198 ORTHO05D003365 8.4e-07 56.6 35 80.0
BcaB02g10670 Brassica carinata HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 80.0
A06p27430 Brassica napus HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 80.0
BraA06t25682Z Brassica rapa HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 80.0
Carub.0005s1427 Capsella rubella HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 77.1
Sed0010361 Sechium edule HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 77.1
Sed0016621 Sechium edule HOM05D000198 ORTHO05D003365 1.1e-06 56.2 35 80.0
CSS0036645 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D003365 1.4e-06 55.8 37 67.6
CARHR156890 Cardamine hirsuta HOM05D000198 ORTHO05D003365 1.4e-06 55.8 35 80.0
Dinv20700 Davidia involucrata HOM05D000198 ORTHO05D003365 1.4e-06 55.8 35 71.4
Thhalv10010305m.g Eutrema salsugineum HOM05D000198 ORTHO05D003365 1.4e-06 55.8 35 80.0
Thhalv10018437m.g Eutrema salsugineum HOM05D000198 ORTHO05D003365 1.4e-06 55.8 35 77.1
Atru.chr9.2400 Acer truncatum HOM05D000198 ORTHO05D003365 1.9e-06 55.5 35 71.4
CARHR068240 Cardamine hirsuta HOM05D000198 ORTHO05D003365 1.9e-06 55.5 35 77.1
CsaV3_1G001830 Cucumis sativus L. HOM05D000198 ORTHO05D003365 1.9e-06 55.5 35 77.1
PGR083G1998 Punica granatum HOM05D000198 ORTHO05D003365 1.9e-06 55.5 35 74.3
Sp5g30060 Schrenkiella parvula HOM05D000198 ORTHO05D003365 1.9e-06 55.5 35 77.1
Ah.11g046210 Amaranthus hybridus HOM05D000198 ORTHO05D003365 2.5e-06 55.1 34 76.5
EL10Ac5g10835 Beta vulgaris HOM05D000198 ORTHO05D003365 2.5e-06 55.1 35 74.3
PSO384G1175 Papaver somniferum HOM05D000198 ORTHO05D003365 2.5e-06 55.1 35 77.1
Prupe.3G277000 Prunus persica HOM05D000198 ORTHO05D003365 2.5e-06 55.1 32 78.1
Prupe.5G179800 Prunus persica HOM05D000198 ORTHO05D003365 2.5e-06 55.1 35 74.3
QL02p078556 Quercus lobata HOM05D000198 ORTHO05D003365 2.5e-06 55.1 35 71.4
TAR629G0665 Trochodendron aralioides HOM05D000198 ORTHO05D003365 2.5e-06 55.1 35 74.3
Aa31LG4G5130 Aethionema arabicum HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
A07p29170 Brassica napus HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
C06p33060 Brassica napus HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
BraA07t30556Z Brassica rapa HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
Carub.0002s2171 Capsella rubella HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
AUR62031047 Chenopodium quinoa HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 68.6
Prupe.5G179700 Prunus persica HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 74.3
THA.LOC104817887 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 3.2e-06 54.7 35 77.1
Ah.11g046200 Amaranthus hybridus HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 68.6
arahy.Tifrunner.gnm1.ann1.JTTA2P Arachis hypogaea HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 74.3
arahy.Tifrunner.gnm1.ann1.M4G3QU Arachis hypogaea HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 74.3
BcaC01g02312 Brassica carinata HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
BcaC01g02323 Brassica carinata HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
C03p66630 Brassica napus HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
C03p66720 Brassica napus HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
BolC3t18934H Brassica oleracea HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
BolC3t18940H Brassica oleracea HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 77.1
Hma1.2p1_0002F.1_g002875 Hydrangea macrophylla HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 74.3
MD06G1181500 Malus domestica HOM05D000198 ORTHO05D003365 4.2e-06 54.3 35 74.3
AUR62031049 Chenopodium quinoa HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 74.3
COL.COLO4_21444 Corchorus olitorius HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 74.3
Duzib068G0738 Durio zibethinus HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 74.3
Duzib068G1286 Durio zibethinus HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 74.3
Manes.06G100200 Manihot esculenta HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 71.4
QL10p012294 Quercus lobata HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 71.4
Sc12g0005650 Simmondsia chinensis HOM05D000198 ORTHO05D003365 5.5e-06 53.9 35 74.3
BcaB02g06972 Brassica carinata HOM05D000198 ORTHO05D003365 7.1e-06 53.5 35 74.3
Pp3c5_22400 Physcomitrium patens HOM05D000198 ORTHO05D003365 7.1e-06 53.5 69 40.6
Sp5g13870 Schrenkiella parvula HOM05D000198 ORTHO05D003365 7.1e-06 53.5 35 74.3
HPP92_010830 Vanilla planifolia HOM05D000198 ORTHO05D003365 7.1e-06 53.5 35 68.6
Aa31LG4G16770 Aethionema arabicum HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 74.3
AL2G34800 Arabidopsis lyrata HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 74.3
Cfa019065 Carpinus fangiana HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 71.4
MD14G1187400 Malus domestica HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 74.3
PSO161G0059 Papaver somniferum HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 71.4
PSO478G0541 Papaver somniferum HOM05D000198 ORTHO05D003365 9.3e-06 53.1 35 71.4


User provided reference genes

Program Settings