Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.0e-201 704.9 340 100.0
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 4.9e-127 458.4 366 65.3
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.0e-120 436.4 365 62.2
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 2.4e-110 402.9 331 63.4
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 3.2e-110 402.5 331 63.1
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.2e-109 400.6 334 64.1
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 2.9e-103 379.4 274 67.2
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.6e-101 373.6 254 71.3
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 2.7e-101 372.9 259 72.2
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 8.7e-100 367.9 281 65.1
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.1e-99 367.5 280 66.1
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 4.3e-99 365.5 286 66.1
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.3e-98 364.0 267 66.7
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.3e-98 364.0 211 79.1
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.3e-98 364.0 211 79.1
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.6e-98 363.6 211 78.7
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 4.8e-98 362.1 253 70.0
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 6.9e-97 358.2 284 63.7
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 9.0e-97 357.8 201 81.6
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 9.0e-97 357.8 249 69.9
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 9.0e-97 357.8 238 73.9
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.5e-96 357.1 213 77.9
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.6e-96 356.3 224 74.1
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 4.5e-96 355.5 215 78.1
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 7.6e-96 354.8 325 56.6
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 9.9e-96 354.4 262 67.9
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 9.9e-96 354.4 319 57.1
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.3e-95 354.0 229 73.4
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 1.3e-95 354.0 221 75.1
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.7e-95 353.6 264 65.5
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.2e-95 353.2 258 69.0
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 4.9e-95 352.1 216 76.4
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 8.4e-95 351.3 266 66.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.9e-94 350.1 323 56.3
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.4e-94 349.7 292 64.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 2.4e-94 349.7 199 81.4
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 2.4e-94 349.7 223 72.6
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 4.2e-94 349.0 264 65.2
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 5.4e-94 348.6 224 73.2
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 7.1e-94 348.2 210 77.6
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.2e-93 347.4 224 74.1
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 1.6e-93 347.1 212 78.3
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.6e-93 347.1 228 72.4
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 2.1e-93 346.7 218 73.9
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 2.7e-93 346.3 205 78.5
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 4.6e-93 345.5 205 78.5
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 4.6e-93 345.5 200 81.0
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 4.6e-93 345.5 277 63.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 6.0e-93 345.1 215 74.9
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 6.0e-93 345.1 203 78.3
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 7.9e-93 344.7 205 78.0
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.0e-92 344.4 203 77.3
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.3e-92 344.0 200 80.5
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.8e-92 343.6 283 64.0
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 3.9e-92 342.4 282 62.4
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 5.1e-92 342.0 290 62.1
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 8.7e-92 341.3 229 70.7
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.5e-91 340.5 275 62.2
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.9e-91 340.1 219 73.1
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 3.3e-91 339.3 292 63.0
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.3e-91 339.3 206 75.2
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 3.3e-91 339.3 205 77.6
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 4.3e-91 339.0 205 77.6
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 4.3e-91 339.0 278 61.9
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 7.4e-91 338.2 231 72.3
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 1.3e-90 337.4 279 60.2
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 1.3e-90 337.4 211 74.9
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.6e-90 337.0 265 64.5
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.1e-90 336.7 289 61.6
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 4.8e-90 335.5 200 77.0
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.8e-90 335.5 200 77.0
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.8e-90 335.5 200 77.0
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 6.2e-90 335.1 284 61.6
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.1e-89 334.3 200 77.0
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.8e-89 333.6 220 73.2
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 2.4e-89 333.2 236 67.4
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 3.1e-89 332.8 206 75.7
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 4.0e-89 332.4 226 69.5
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.0e-89 332.4 206 75.2
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 5.3e-89 332.0 205 76.1
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 5.3e-89 332.0 279 63.1
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 6.9e-89 331.6 222 69.8
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.5e-88 330.5 292 59.9
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 2.6e-88 329.7 235 64.7
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 3.4e-88 329.3 205 75.1
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 4.5e-88 328.9 290 60.0
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 5.8e-88 328.6 230 66.1
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 5.8e-88 328.6 283 61.5
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 1.3e-87 327.4 271 62.7
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 1.7e-87 327.0 202 74.3
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 1.7e-87 327.0 202 74.3
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 1.7e-87 327.0 332 53.9
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 2.2e-87 326.6 326 52.5
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 8.4e-87 324.7 231 66.2
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 1.1e-86 324.3 289 56.4
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 1.1e-86 324.3 189 77.8
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.9e-86 323.6 295 56.6
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.2e-86 322.8 229 69.9
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 3.2e-86 322.8 286 57.7
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 4.2e-86 322.4 220 70.9
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 7.1e-86 321.6 280 59.3
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 7.1e-86 321.6 257 61.9
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 7.1e-86 321.6 257 61.9
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 7.1e-86 321.6 280 59.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 1.2e-85 320.9 221 70.6
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.6e-85 320.5 212 72.6
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.7e-85 319.7 230 67.0
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.8e-84 317.0 334 53.0
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 6.7e-84 315.1 246 62.2
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.1e-83 314.3 247 62.3
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 5.7e-83 312.0 210 67.1
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.7e-83 312.0 209 68.4
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.7e-82 309.3 209 67.9
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.6e-80 303.1 226 64.6
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 2.9e-79 299.7 224 64.3
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 5.0e-79 298.9 265 55.5
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 8.4e-79 298.1 269 55.4
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 5.7e-75 285.4 206 62.6
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.4e-72 276.2 159 80.5
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 3.9e-68 262.7 233 53.6
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 8.8e-68 261.5 212 61.3
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 2.2e-66 256.9 200 57.5
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 3.7e-66 256.1 164 73.8
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 4.8e-66 255.8 291 50.9
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 6.3e-66 255.4 163 69.3
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 4.1e-65 252.7 157 72.6
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 7.9e-61 238.4 148 73.0
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 4.8e-58 229.2 208 52.9
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 2.4e-57 226.9 139 74.1
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 5.5e-46 189.1 119 71.4
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 1.6e-45 187.6 172 48.8
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.6e-43 180.3 147 60.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 6.3e-42 175.6 154 58.4
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.1e-37 160.6 197 49.7
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 2.3e-31 140.6 119 52.9
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.6e-29 134.4 152 51.3
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 8.0e-21 105.5 83 54.2
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.0e-19 100.9 67 70.1
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.6e-16 91.3 86 55.8
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 2.3e-15 87.4 60 68.3
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 5.0e-15 86.3 64 65.6
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.6e-13 81.3 69 60.9
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.2e-10 70.9 66 57.6
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 1.7e-07 61.2 51 58.8
Oeu021232.1 Olea europaea HOM05D005195 ORTHO05D006088 9.5e-06 55.5 146 31.5


User provided reference genes

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