Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 2.4e-33 144.8 69 100.0
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.9e-14 82.0 38 97.4
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.3e-14 80.9 38 97.4
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.3e-14 80.9 36 100.0
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 5.6e-14 80.5 43 86.0
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 7.3e-14 80.1 54 72.2
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 7.3e-14 80.1 45 88.9
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 7.3e-14 80.1 55 67.3
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 7.3e-14 80.1 37 97.3
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 9.6e-14 79.7 38 92.1
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 9.6e-14 79.7 45 82.2
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.3e-13 79.3 37 94.6
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.3e-13 79.3 40 87.5
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.3e-13 79.3 41 85.4
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.3e-13 79.3 42 88.1
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.3e-13 79.3 42 88.1
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.3e-13 79.3 43 86.0
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 1.3e-13 79.3 45 82.2
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.6e-13 79.0 43 86.0
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 1.6e-13 79.0 40 87.5
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.6e-13 79.0 40 87.5
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 1.6e-13 79.0 41 87.8
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.1e-13 78.6 35 100.0
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.1e-13 78.6 35 100.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 2.1e-13 78.6 45 80.0
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 2.1e-13 78.6 35 100.0
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 2.1e-13 78.6 35 100.0
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 4.8e-13 77.4 37 94.6
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.2e-13 77.0 40 85.0
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 8.1e-13 76.6 37 94.6
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 1.1e-12 76.3 53 71.7
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 6.9e-12 73.6 37 91.9
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.9e-12 73.6 40 82.5
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.9e-12 73.6 40 82.5
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.9e-12 73.6 40 82.5
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 6.9e-12 73.6 41 82.9
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 9.0e-12 73.2 39 87.2
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 1.2e-11 72.8 36 91.7
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 1.2e-11 72.8 47 72.3
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 1.2e-11 72.8 38 89.5
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 1.2e-11 72.8 32 100.0
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 1.5e-11 72.4 35 94.3
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.5e-11 72.4 35 94.3
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.5e-11 72.4 35 94.3
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.4 35 94.3
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 1.5e-11 72.4 35 94.3
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.6e-11 71.6 37 89.2
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 4.5e-11 70.9 37 86.5
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 5.8e-11 70.5 31 100.0
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 5.8e-11 70.5 31 100.0
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 36 88.9
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 36 88.9
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 41 80.5
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.8e-11 70.5 38 84.2
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 9.9e-11 69.7 36 88.9
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.9e-11 69.7 41 73.2
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.9e-11 69.7 41 73.2
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.3e-10 69.3 36 91.7
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.7e-10 68.9 31 100.0
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 1.7e-10 68.9 31 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.7e-10 68.9 32 96.9
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 2.2e-10 68.6 36 88.9
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.2e-10 68.6 32 96.9
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 2.9e-10 68.2 53 66.0
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 2.9e-10 68.2 33 93.9
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 4.9e-10 67.4 33 93.9
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.4e-10 67.0 31 96.8
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 8.4e-10 66.6 30 100.0
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 8.4e-10 66.6 30 100.0
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 8.4e-10 66.6 30 100.0
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 8.4e-10 66.6 37 81.1
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 8.4e-10 66.6 37 81.1
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.9e-09 65.5 30 96.7
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 2.4e-09 65.1 36 86.1
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 4.2e-09 64.3 30 96.7
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 3.5e-08 61.2 36 77.8
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 6.0e-08 60.5 34 82.4
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.3e-07 58.5 35 74.3
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.3e-07 58.5 35 74.3
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 8.7e-07 56.6 27 96.3
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 3.3e-06 54.7 31 80.6
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.6e-06 53.9 32 75.0


User provided reference genes

Program Settings