Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.3e-149 533.1 286 100.0
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 2.1e-59 233.4 301 49.5
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 2.6e-57 226.5 296 52.0
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 1.6e-54 217.2 296 48.3
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 1.5e-49 200.7 302 48.0
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 4.5e-49 199.1 295 45.4
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 4.5e-49 199.1 295 45.4
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 7.7e-49 198.4 295 45.8
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 1.4e-47 194.1 298 45.3
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 2.7e-46 189.9 303 46.9
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 7.9e-46 188.3 281 47.3
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 1.8e-45 187.2 286 46.5
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 6.7e-45 185.3 295 43.4
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 1.5e-44 184.1 302 44.0
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 2.0e-44 183.7 299 43.1
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 3.3e-44 183.0 290 42.4
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 3.3e-44 183.0 287 41.5
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 3.3e-44 183.0 304 45.4
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 4.4e-44 182.6 298 48.0
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 7.4e-44 181.8 291 47.1
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 7.4e-44 181.8 263 45.2
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 9.7e-44 181.4 287 43.9
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.7e-43 180.6 297 41.8
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 2.2e-43 180.3 305 41.3
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.2e-43 180.3 291 47.1
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 2.8e-43 179.9 301 43.2
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 3.7e-43 179.5 299 41.5
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 4.8e-43 179.1 275 48.0
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 6.3e-43 178.7 287 47.0
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 1.1e-42 177.9 262 43.9
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 1.4e-42 177.6 296 42.6
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 1.8e-42 177.2 289 42.2
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 2.4e-42 176.8 307 44.6
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 2.4e-42 176.8 287 45.6
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 3.1e-42 176.4 251 45.8
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 4.1e-42 176.0 290 41.4
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 9.1e-42 174.9 304 41.1
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.5e-41 174.1 299 44.8
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 2.0e-41 173.7 299 42.8
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 2.0e-41 173.7 299 42.8
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 2.0e-41 173.7 280 46.1
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 2.6e-41 173.3 266 44.7
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 4.5e-41 172.6 279 45.9
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 5.9e-41 172.2 294 44.2
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 1.7e-40 170.6 287 44.6
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 2.9e-40 169.9 295 41.4
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 2.9e-40 169.9 294 43.9
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 5.0e-40 169.1 284 40.8
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 5.0e-40 169.1 302 40.1
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 5.0e-40 169.1 297 45.5
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 8.5e-40 168.3 301 44.9
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 8.5e-40 168.3 301 44.9
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 1.4e-39 167.5 299 40.8
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 3.2e-39 166.4 295 42.7
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 7.2e-39 165.2 254 46.9
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 7.2e-39 165.2 298 41.6
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 7.2e-39 165.2 289 40.1
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 9.4e-39 164.9 287 41.5
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 1.2e-38 164.5 303 41.6
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 1.6e-38 164.1 304 40.8
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.1e-38 163.7 272 44.9
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 4.7e-38 162.5 289 41.5
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 6.1e-38 162.2 256 46.5
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 7.9e-38 161.8 286 42.7
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 1.0e-37 161.4 284 40.8
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.0e-37 161.4 302 43.4
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.0e-37 161.4 310 41.6
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 3.0e-37 159.8 280 46.1
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 3.0e-37 159.8 298 39.6
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 3.9e-37 159.5 312 40.1
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 3.9e-37 159.5 296 38.5
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 5.2e-37 159.1 285 43.9
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 5.2e-37 159.1 281 38.8
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 6.7e-37 158.7 295 40.0
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 8.8e-37 158.3 292 42.8
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 1.1e-36 157.9 280 41.1
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 2.0e-36 157.1 261 41.8
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 2.6e-36 156.8 296 40.5
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 2.6e-36 156.8 291 41.9
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 2.6e-36 156.8 289 41.2
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 4.4e-36 156.0 296 43.9
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.3e-35 154.5 299 39.8
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 1.7e-35 154.1 302 38.1
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 1.7e-35 154.1 287 41.1
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 2.8e-35 153.3 301 37.5
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 3.7e-35 152.9 295 44.4
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 3.7e-35 152.9 261 43.7
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 6.3e-35 152.1 301 43.5
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 1.1e-34 151.4 286 40.6
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.1e-34 151.4 309 37.2
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 1.4e-34 151.0 287 39.7
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 2.4e-34 150.2 301 42.5
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 5.3e-34 149.1 270 42.6
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 1.6e-33 147.5 305 42.0
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 3.5e-33 146.4 312 38.1
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 4.5e-33 146.0 305 40.7
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 1.3e-32 144.4 291 38.1
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 1.7e-32 144.1 232 45.3
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 5.0e-32 142.5 307 41.0
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 5.5e-31 139.0 288 41.7
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 5.5e-31 139.0 400 34.5
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 7.2e-31 138.7 311 37.6
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 1.2e-30 137.9 253 44.3
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 1.2e-30 137.9 270 40.0
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 2.1e-30 137.1 261 41.8
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 8.0e-30 135.2 310 41.9
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 4.0e-29 132.9 268 38.4
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 5.2e-29 132.5 302 40.7
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 1.5e-28 131.0 287 37.6
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 2.0e-28 130.6 299 42.1
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 4.4e-28 129.4 307 40.4
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 5.7e-28 129.0 293 38.2
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 5.7e-28 129.0 300 38.3
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 1.7e-27 127.5 297 39.7
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 2.8e-27 126.7 240 37.9
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.1e-26 124.8 256 38.7
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 1.4e-26 124.4 165 48.5
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 1.4e-26 124.4 287 36.9
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 5.9e-25 119.0 288 37.5
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 7.7e-25 118.6 248 38.3
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 7.7e-25 118.6 269 38.7
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 8.5e-24 115.2 269 37.2
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 2.6e-20 103.6 161 41.0
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 8.3e-19 98.6 160 45.0
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 1.1e-18 98.2 267 32.6
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 1.6e-17 94.4 285 34.0
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 2.0e-17 94.0 277 28.9
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 1.7e-16 90.9 259 30.9
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 1.9e-15 87.4 235 32.3
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 3.6e-14 83.2 152 39.5
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.4e-13 81.3 167 37.7
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 4.4e-12 76.3 99 48.5
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 1.7e-11 74.3 76 50.0
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 2.8e-11 73.6 217 30.9
Lj5C672T2 Lonicera japonica HOM05D005029 ORTHO05D006052 4.9e-11 72.8 61 57.4
Aa31LG8G16260 Aethionema arabicum HOM05D005029 ORTHO05D006052 2.5e-07 60.5 99 42.4
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 3.3e-07 60.1 284 27.1
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 1.2e-06 58.2 77 44.2
BcaB06g26390 Brassica carinata HOM05D005029 ORTHO05D006052 1.6e-06 57.8 88 40.9


User provided reference genes

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