Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 1.2e-144 516.9 365 100.0
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 2.0e-94 350.1 341 79.8
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 5.0e-93 345.5 365 76.7
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.9e-90 335.9 367 70.6
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 1.1e-89 334.3 336 79.8
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.8e-88 329.7 336 73.2
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 5.0e-85 318.9 367 71.4
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.4e-84 317.4 367 71.1
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.2e-84 316.2 336 74.7
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 2.1e-83 313.5 367 70.8
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 3.6e-83 312.8 388 72.4
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 3.0e-82 309.7 354 73.7
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 3.0e-82 309.7 366 71.9
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.1e-81 307.8 348 74.4
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.5e-78 297.4 337 74.2
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 4.5e-78 295.8 368 70.1
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 1.0e-77 294.7 368 72.3
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 3.8e-77 292.7 366 68.9
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 5.0e-77 292.4 348 70.7
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 4.2e-76 289.3 366 68.0
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 2.7e-75 286.6 310 72.3
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 4.7e-75 285.8 376 58.0
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 2.3e-74 283.5 381 66.7
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 5.1e-74 282.3 368 69.8
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 6.7e-74 282.0 375 67.7
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 5.7e-73 278.9 366 70.5
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 6.3e-72 275.4 327 74.3
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 8.2e-72 275.0 324 72.5
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 1.4e-71 274.2 366 62.0
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 4.1e-71 272.7 368 64.9
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 5.3e-71 272.3 347 64.0
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 7.0e-71 271.9 345 65.2
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 1.2e-70 271.2 324 71.9
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 1.2e-70 271.2 324 71.9
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 1.2e-70 271.2 324 71.9
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 1.2e-70 271.2 324 71.9
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 2.0e-70 270.4 324 71.9
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 2.6e-70 270.0 367 65.7
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 2.6e-70 270.0 366 67.2
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 3.5e-70 269.6 327 73.7
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 4.5e-70 269.2 325 72.6
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 7.7e-70 268.5 324 71.6
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 1.7e-69 267.3 325 71.7
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 6.5e-69 265.4 369 63.7
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 8.5e-69 265.0 364 65.1
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 1.5e-68 264.2 346 69.4
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 1.9e-68 263.8 365 64.9
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 1.9e-68 263.8 371 65.2
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 1.9e-68 263.8 368 53.3
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 5.5e-68 262.3 364 61.0
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 7.2e-68 261.9 372 64.2
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 2.1e-67 260.4 368 66.8
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 2.7e-67 260.0 374 65.8
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 4.7e-67 259.2 336 69.9
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 8.0e-67 258.5 378 65.3
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.4e-66 257.7 345 69.3
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.3e-66 256.9 339 67.8
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 8.8e-66 255.0 357 65.8
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.5e-65 254.2 370 64.1
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 1.5e-65 254.2 368 66.8
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 2.0e-65 253.8 323 63.5
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 3.7e-64 249.6 366 60.7
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 8.2e-64 248.4 324 70.1
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 3.1e-63 246.5 368 61.4
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 4.5e-62 242.7 369 63.7
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 3.8e-61 239.6 370 64.6
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 1.1e-60 238.0 325 68.6
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.5e-60 237.7 330 66.4
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.9e-60 237.3 289 75.1
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 1.9e-60 237.3 327 68.8
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.9e-60 237.3 324 68.2
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 1.9e-60 237.3 356 56.2
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 3.2e-60 236.5 382 63.6
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 3.2e-60 236.5 311 70.1
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 7.2e-60 235.3 324 67.9
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 7.2e-60 235.3 390 58.5
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 7.2e-60 235.3 390 58.5
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 7.2e-60 235.3 324 67.9
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 4.7e-59 232.6 371 54.2
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 4.7e-59 232.6 364 62.4
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 6.1e-59 232.3 340 53.5
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 6.1e-59 232.3 386 60.1
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 8.0e-59 231.9 319 69.3
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.4e-58 231.1 354 60.5
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 1.8e-58 230.7 380 57.9
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 1.8e-58 230.7 362 65.2
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 2.3e-58 230.3 371 60.9
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 2.3e-58 230.3 300 70.3
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 4.0e-58 229.6 332 68.1
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 2.6e-57 226.9 359 63.2
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 4.8e-56 222.6 320 67.5
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 6.3e-56 222.2 359 63.8
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 1.8e-55 220.7 367 60.2
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 1.8e-55 220.7 319 62.4
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 5.4e-55 219.2 317 66.2
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 1.2e-54 218.0 385 59.7
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 1.2e-54 218.0 323 65.9
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 2.0e-54 217.2 321 65.7
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.7e-54 216.9 305 64.3
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 3.5e-54 216.5 344 53.5
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 5.9e-54 215.7 407 45.5
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 7.7e-54 215.3 325 59.1
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 1.3e-53 214.5 380 60.8
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.1e-52 211.5 379 56.2
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.9e-52 210.7 324 62.3
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 7.2e-52 208.8 324 63.0
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.2e-51 208.0 315 63.8
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 1.2e-51 208.0 318 65.4
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 2.7e-51 206.8 286 68.5
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 4.7e-51 206.1 318 64.8
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 8.0e-51 205.3 394 51.3
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 8.0e-51 205.3 330 62.4
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 1.0e-50 204.9 361 61.5
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 1.4e-50 204.5 324 61.7
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 1.4e-50 204.5 253 64.0
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 1.4e-50 204.5 253 64.0
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 1.8e-50 204.1 295 66.4
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 3.0e-50 203.4 295 66.4
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 4.0e-50 203.0 370 57.8
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 1.5e-49 201.1 253 63.6
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 2.0e-49 200.7 368 48.6
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.6e-49 200.3 368 58.7
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 3.4e-49 199.9 352 61.1
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 9.8e-49 198.4 363 60.9
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 9.8e-49 198.4 309 48.9
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 1.3e-48 198.0 318 67.0
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 4.9e-48 196.1 380 58.7
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 8.3e-48 195.3 335 61.8
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 2.4e-47 193.7 352 60.8
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 4.1e-47 193.0 347 55.3
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 5.4e-47 192.6 305 63.0
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.2e-46 191.4 353 54.1
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 1.2e-46 191.4 328 50.0
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 1.6e-46 191.0 335 60.9
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 1.6e-46 191.0 347 61.4
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 2.0e-46 190.7 206 72.8
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 2.0e-46 190.7 318 63.2
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 1.7e-45 187.6 317 62.5
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 3.8e-45 186.4 253 73.9
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 8.6e-45 185.3 381 55.6
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 2.5e-44 183.7 390 55.1
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 9.5e-44 181.8 358 57.3
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 9.5e-44 181.8 358 57.3
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 1.2e-43 181.4 389 54.8
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 2.1e-43 180.6 388 53.9
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 2.8e-43 180.3 360 56.7
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 3.6e-43 179.9 362 54.4
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 4.7e-43 179.5 364 58.0
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 6.1e-43 179.1 337 51.6
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 8.0e-43 178.7 381 56.7
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 1.8e-42 177.6 358 57.0
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 1.8e-42 177.6 338 57.1
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 1.8e-42 177.6 338 61.2
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 3.0e-42 176.8 345 59.7
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 3.0e-42 176.8 343 58.0
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 4.0e-42 176.4 191 59.7
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 4.0e-42 176.4 268 72.0
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 2.0e-41 174.1 358 55.9
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 2.0e-41 174.1 324 60.5
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 4.4e-41 172.9 324 60.2
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 9.8e-41 171.8 324 61.1
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 1.3e-40 171.4 378 55.0
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 1.3e-40 171.4 354 57.1
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 3.2e-39 166.8 319 57.7
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 3.2e-39 166.8 368 56.2
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 1.0e-37 161.8 307 61.9
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 1.6e-35 154.5 271 52.0
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 1.2e-33 148.3 314 55.1
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 4.9e-32 142.9 338 53.0
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 1.1e-31 141.7 208 57.7
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 9.2e-31 138.7 325 53.5
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.0e-30 137.5 166 62.0
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 3.5e-30 136.7 350 54.6
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 3.5e-30 136.7 350 54.6
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 3.5e-30 136.7 350 54.6
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 8.6e-29 132.1 197 59.4
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 1.5e-28 131.3 241 65.1
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.9e-28 131.0 208 51.4
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 3.6e-27 126.7 203 52.2
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.3e-26 124.0 286 62.6
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 6.8e-26 122.5 79 82.3
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 2.7e-22 110.5 333 49.2
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.8e-18 97.8 82 63.4
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 1.1e-15 88.6 116 62.9
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 1.4e-15 88.2 263 58.6
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.6e-14 84.7 376 46.3
ClCG06G013820 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.8e-10 71.2 75 54.7
SEGI_36064 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 2.4e-10 70.9 140 60.7


User provided reference genes

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