Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 2.3e-254 881.7 442 100.0
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 1.8e-153 546.6 426 70.4
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 1.7e-151 540.0 427 69.6
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.2e-151 539.7 428 68.2
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 6.3e-151 538.1 458 64.4
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 4.7e-146 521.9 427 66.7
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.4e-145 520.4 427 66.5
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 4.4e-144 515.4 463 63.3
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 2.8e-143 512.7 429 65.7
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 9.5e-131 471.1 450 57.6
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.2e-128 464.2 449 57.9
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 7.5e-128 461.5 449 57.9
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.8e-127 459.5 453 57.2
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 4.9e-127 458.8 450 56.9
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 5.4e-126 455.3 447 56.8
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.2e-125 454.1 445 56.4
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 5.9e-125 451.8 449 56.3
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 1.7e-124 450.3 449 55.9
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 2.3e-124 449.9 448 55.4
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 5.0e-124 448.7 450 55.3
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 3.3e-123 446.0 447 55.7
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 3.3e-123 446.0 432 60.0
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 9.5e-123 444.5 447 55.5
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 6.1e-122 441.8 446 55.4
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 8.0e-122 441.4 448 56.5
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.0e-121 441.0 423 58.2
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 1.4e-121 440.7 452 54.2
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 2.3e-121 439.9 465 54.6
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 3.1e-121 439.5 446 54.9
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 6.8e-121 438.3 446 54.9
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 6.8e-121 438.3 452 55.5
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.2e-120 437.6 452 55.3
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 1.7e-119 433.7 450 54.9
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 1.7e-119 433.7 454 54.6
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.2e-119 433.3 419 58.0
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 8.3e-119 431.4 463 51.4
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 5.4e-118 428.7 451 55.4
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.6e-117 427.2 449 53.2
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 2.0e-117 426.8 434 54.4
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 2.0e-117 426.8 457 53.8
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 4.6e-117 425.6 449 52.8
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 6.0e-117 425.2 425 56.5
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.3e-116 424.1 404 58.4
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 1.7e-116 423.7 450 54.2
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 8.6e-116 421.4 423 57.0
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 8.6e-116 421.4 436 53.7
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 5.6e-115 418.7 448 52.7
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 2.8e-114 416.4 450 51.8
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 2.8e-114 416.4 446 53.1
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 6.2e-114 415.2 418 56.2
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 6.2e-114 415.2 449 52.6
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 8.9e-113 411.4 434 54.8
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 1.5e-112 410.6 450 52.2
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 2.6e-112 409.8 454 50.9
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 2.6e-112 409.8 423 54.4
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 2.6e-112 409.8 334 65.6
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 3.4e-112 409.5 438 53.2
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 4.4e-112 409.1 451 52.3
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 7.5e-112 408.3 406 56.9
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 2.9e-111 406.4 481 48.6
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.4e-110 403.3 452 52.0
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 4.1e-110 402.5 431 54.8
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 9.2e-110 401.4 445 51.9
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.2e-109 401.0 409 54.3
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 2.7e-109 399.8 445 51.7
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 1.7e-108 397.1 446 50.9
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 3.9e-108 396.0 448 51.1
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 5.1e-108 395.6 444 50.5
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 2.5e-107 393.3 478 49.8
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 5.6e-107 392.1 450 48.9
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 1.6e-106 390.6 452 49.3
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 1.6e-106 390.6 446 49.3
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 2.1e-106 390.2 491 48.5
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 3.6e-106 389.4 449 49.7
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 2.3e-105 386.7 332 61.7
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 2.3e-105 386.7 446 48.9
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 3.1e-105 386.3 451 49.0
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 3.1e-105 386.3 403 54.3
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.5e-104 384.0 450 51.6
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 2.0e-104 383.6 460 47.8
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 2.6e-104 383.3 353 56.7
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.4e-104 382.9 462 48.5
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 4.4e-104 382.5 429 51.5
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 4.4e-104 382.5 373 56.8
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 5.8e-104 382.1 458 47.8
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 9.9e-104 381.3 339 60.8
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 1.7e-103 380.6 453 48.6
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.7e-103 379.4 467 49.0
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 4.9e-103 379.0 387 55.0
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 1.9e-102 377.1 450 48.2
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.9e-102 377.1 473 48.8
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 2.4e-102 376.7 426 50.9
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 2.4e-102 376.7 422 51.4
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.2e-101 374.4 465 47.5
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.1e-101 373.6 468 48.1
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 2.1e-101 373.6 449 49.4
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 7.8e-101 371.7 455 47.7
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 2.3e-100 370.2 455 47.5
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 1.9e-99 367.1 427 48.9
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 1.9e-99 367.1 492 47.4
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 4.3e-99 365.9 471 46.7
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 4.7e-98 362.5 407 49.9
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 1.1e-97 361.3 374 55.1
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 4.0e-97 359.4 400 50.2
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 4.0e-97 359.4 315 61.6
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.2e-96 357.8 394 50.5
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 2.0e-96 357.1 429 48.3
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 2.0e-96 357.1 429 48.3
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 4.2e-94 349.4 383 54.0
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 1.6e-93 347.4 445 45.6
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 1.0e-92 344.7 445 45.4
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 3.0e-92 343.2 416 46.9
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 1.9e-91 340.5 416 46.4
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 2.5e-91 340.1 384 53.4
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 7.3e-91 338.6 391 51.4
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 9.6e-91 338.2 447 46.3
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 8.1e-90 335.1 467 45.4
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 4.0e-89 332.8 450 44.7
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.2e-88 331.3 460 43.7
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.5e-88 330.9 459 42.7
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.5e-88 330.9 510 42.0
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 9.9e-88 328.2 314 55.7
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 1.3e-87 327.8 405 45.9
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 7.9e-85 318.5 359 50.4
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 3.0e-84 316.6 414 44.7
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 5.1e-84 315.8 264 60.2
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 6.6e-84 315.5 450 42.2
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 1.5e-83 314.3 365 46.8
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 1.9e-83 313.9 300 58.0
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 4.0e-81 306.2 324 52.8
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 6.9e-81 305.4 423 42.6
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 9.3e-78 295.0 457 40.0
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 1.8e-76 290.8 323 46.4
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.8e-76 290.8 433 41.3
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 3.0e-76 290.0 401 44.4
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-75 288.1 405 44.2
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 1.5e-75 287.7 375 43.5
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 9.6e-75 285.0 403 43.9
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 4.0e-73 279.6 349 45.6
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 6.9e-73 278.9 282 54.6
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 1.3e-71 274.6 392 43.6
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 2.7e-69 266.9 346 41.3
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 8.7e-68 261.9 369 42.8
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-67 261.5 369 42.8
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 7.4e-67 258.8 429 40.1
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 1.5e-64 251.1 356 42.1
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 2.6e-64 250.4 273 52.0
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 1.3e-63 248.1 353 43.9
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 6.3e-58 229.2 206 58.7
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 4.1e-57 226.5 370 40.5
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.1e-45 187.6 484 30.0
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 8.5e-39 165.6 446 31.2
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 3.2e-38 163.7 446 30.7
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.2e-37 161.8 150 56.7
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 5.7e-35 152.9 118 59.3
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.6e-32 144.8 200 45.0
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 1.1e-25 122.1 129 53.5
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 3.8e-23 113.6 150 42.0
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 1.5e-22 111.7 166 42.8
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 3.0e-20 104.0 100 49.0
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 5.2e-20 103.2 80 66.2
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 2.0e-19 101.3 94 53.2
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 6.3e-18 96.3 94 47.9
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 2.4e-17 94.4 154 46.1
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 4.1e-17 93.6 64 73.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.0e-16 91.3 94 47.9
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 2.7e-16 90.9 101 44.6
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.3e-15 88.6 127 41.7
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 1.3e-15 88.6 96 58.3
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 1.9e-14 84.7 304 28.9
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 4.3e-14 83.6 156 41.0
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 4.4e-11 73.6 184 34.2
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 1.4e-09 68.6 70 52.9
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 3.2e-09 67.4 53 64.2
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 1.2e-08 65.5 113 37.2
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 1.3e-07 62.0 51 54.9
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 1.3e-07 62.0 51 54.9
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 3.9e-07 60.5 81 45.7
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 3.9e-07 60.5 82 47.6
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 4.3e-06 57.0 136 33.8


User provided reference genes

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