Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.3e-52 208.0 98 100.0
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.0e-40 169.9 86 90.7
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 6.1e-38 160.6 86 82.6
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.1e-38 160.6 90 80.0
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 8.8e-37 156.8 87 83.9
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.1e-36 156.4 86 81.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.5e-36 156.0 86 80.2
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.0e-36 155.6 97 74.2
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.0e-36 155.6 97 74.2
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 2.0e-36 155.6 86 81.4
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 2.5e-36 155.2 104 72.1
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 3.3e-36 154.8 86 79.1
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.3e-36 154.5 86 80.2
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 4.3e-36 154.5 93 78.5
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 5.7e-36 154.1 86 80.2
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.3e-35 152.9 86 79.1
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.7e-35 152.5 86 79.1
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 2.2e-35 152.1 86 80.2
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 2.2e-35 152.1 86 76.7
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.2e-35 152.1 86 80.2
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 2.2e-35 152.1 86 80.2
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 2.8e-35 151.8 86 79.1
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 3.7e-35 151.4 86 77.9
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 4.8e-35 151.0 86 79.1
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 4.8e-35 151.0 86 79.1
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 4.8e-35 151.0 86 79.1
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 6.3e-35 150.6 86 77.9
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 6.3e-35 150.6 88 75.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 6.3e-35 150.6 99 70.7
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 8.2e-35 150.2 86 79.1
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.1e-34 149.8 86 77.9
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.4e-34 149.4 86 77.9
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.4e-34 149.4 86 76.7
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 1.4e-34 149.4 86 80.2
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 1.4e-34 149.4 86 77.9
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 2.4e-34 148.7 86 77.9
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 4.1e-34 147.9 86 75.6
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.1e-34 147.9 86 77.9
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 5.3e-34 147.5 86 77.9
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 5.3e-34 147.5 89 78.7
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 6.9e-34 147.1 86 77.9
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 9.1e-34 146.7 86 77.9
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 2.0e-33 145.6 86 76.7
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 4.5e-33 144.4 86 72.1
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 4.5e-33 144.4 86 75.6
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 4.5e-33 144.4 86 76.7
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 4.5e-33 144.4 86 76.7
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 5.9e-33 144.1 86 74.4
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 5.9e-33 144.1 89 74.2
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 7.7e-33 143.7 86 72.1
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 7.7e-33 143.7 88 75.0
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.0e-32 143.3 84 76.2
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.3e-32 142.9 88 75.0
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-32 142.9 88 75.0
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-32 142.9 88 75.0
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-32 142.9 88 75.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.7e-32 142.5 86 73.3
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 3.8e-32 141.4 84 75.0
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 3.8e-32 141.4 84 73.8
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 5.0e-32 141.0 86 74.4
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 5.0e-32 141.0 84 73.8
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 6.5e-32 140.6 88 73.9
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.1e-31 139.8 86 70.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.1e-31 139.8 91 70.3
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.4e-31 139.4 86 75.6
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 3.2e-31 138.3 100 68.0
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 4.2e-31 137.9 84 73.8
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 4.2e-31 137.9 86 73.3
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 7.2e-31 137.1 86 69.8
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 7.2e-31 137.1 84 75.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 9.4e-31 136.7 84 72.6
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-30 136.3 84 72.6
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-30 136.3 84 72.6
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-30 136.3 84 72.6
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.2e-30 136.3 84 72.6
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-30 136.3 84 72.6
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 1.6e-30 136.0 91 68.1
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.7e-30 135.2 84 71.4
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.7e-30 135.2 84 71.4
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 3.6e-30 134.8 84 71.4
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 7.9e-30 133.7 84 71.4
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 70.2
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 70.2
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 70.2
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 70.2
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 70.2
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.0e-29 133.3 84 71.4
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.0e-29 133.3 88 72.7
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.4e-29 132.9 84 70.2
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 8.8e-29 130.2 100 64.0
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 2.4e-26 122.1 86 65.1
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.6e-25 118.6 85 64.7
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 5.0e-24 114.4 61 78.7
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 8.5e-24 113.6 85 61.2
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 4.2e-23 111.3 84 63.1
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 4.2e-23 111.3 100 60.0
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 4.2e-23 111.3 67 73.1
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 2.1e-22 109.0 57 78.9
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 3.6e-22 108.2 66 74.2
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 3.6e-22 108.2 66 74.2
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 3.6e-22 108.2 65 73.8
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 4.7e-22 107.8 86 61.6
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 6.1e-22 107.5 58 82.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 2.3e-21 105.5 57 78.9
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 5.2e-21 104.4 57 77.2
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 1.1e-20 103.2 54 81.5
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 2.6e-20 102.1 54 81.5
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 2.2e-19 99.0 54 79.6
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 2.4e-18 95.5 54 77.8
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 3.1e-18 95.1 45 86.7
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 5.9e-17 90.9 54 68.5
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.7e-16 89.4 54 68.5
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 5.0e-16 87.8 56 67.9
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 2.5e-15 85.5 40 85.0
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.2e-15 85.1 54 61.1
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 2.0e-12 75.9 58 55.2
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 2.2e-08 62.4 30 80.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 5.5e-07 57.8 63 54.0
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.2e-06 56.6 114 32.5
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.6e-06 56.2 79 34.2


User provided reference genes

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