Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 5.4e-136 487.6 243 100.0
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 2.9e-105 385.6 245 80.8
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 2.5e-93 345.9 253 73.5
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 3.1e-91 339.0 246 72.0
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.4e-88 330.1 250 72.4
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.6e-87 325.1 250 70.8
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 6.0e-87 324.7 246 69.1
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 7.9e-87 324.3 246 69.9
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 2.5e-85 319.3 246 69.9
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 8.1e-84 314.3 251 66.1
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.1e-83 313.9 250 67.2
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.8e-83 313.2 244 69.7
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 4.0e-83 312.0 245 66.5
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 5.3e-83 311.6 242 68.6
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 5.3e-83 311.6 247 68.0
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 6.9e-83 311.2 251 65.7
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.2e-82 310.5 241 66.8
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.5e-82 310.1 239 68.6
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.0e-82 309.7 241 66.8
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 3.4e-82 308.9 240 67.5
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.4e-82 308.9 248 67.3
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 3.4e-82 308.9 245 67.3
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 4.5e-82 308.5 245 67.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 4.5e-82 308.5 240 67.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 4.5e-82 308.5 240 67.5
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 5.8e-82 308.1 242 67.8
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.7e-81 306.6 248 66.1
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.2e-81 306.2 246 67.5
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 2.2e-81 306.2 251 67.7
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 3.8e-81 305.4 252 67.1
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 6.4e-81 304.7 244 67.2
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 6.4e-81 304.7 246 63.8
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 6.4e-81 304.7 244 67.2
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 1.1e-80 303.9 216 71.3
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 1.9e-80 303.1 247 66.8
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 2.5e-80 302.8 242 65.7
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.1e-80 301.2 246 66.7
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.2e-79 300.4 240 65.0
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.1e-79 299.7 244 66.8
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.1e-79 299.7 244 66.8
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 2.1e-79 299.7 252 64.3
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 2.7e-79 299.3 255 64.3
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 2.7e-79 299.3 246 65.9
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.7e-79 299.3 246 65.9
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 3.5e-79 298.9 245 64.9
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 4.6e-79 298.5 246 65.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 7.9e-79 297.7 245 67.3
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 1.3e-78 297.0 265 62.3
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 3.9e-78 295.4 241 65.1
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 6.7e-78 294.7 293 58.0
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 2.5e-77 292.7 249 63.5
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 2.5e-77 292.7 240 65.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 4.3e-77 292.0 247 64.4
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 4.3e-77 292.0 241 65.1
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 5.6e-77 291.6 245 65.7
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 5.6e-77 291.6 245 65.7
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 7.4e-77 291.2 243 64.6
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 2.1e-76 289.7 245 64.1
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.1e-76 289.7 252 62.7
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.1e-76 289.7 246 63.0
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 4.8e-76 288.5 256 64.5
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 4.8e-76 288.5 246 66.3
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 8.2e-76 287.7 241 63.1
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 8.2e-76 287.7 248 64.5
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 8.2e-76 287.7 247 66.0
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.4e-75 287.0 194 72.2
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.4e-75 287.0 237 66.2
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.4e-75 287.0 247 65.2
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.8e-75 286.6 246 64.2
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 3.1e-75 285.8 246 61.8
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.2e-74 283.9 233 65.7
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.6e-74 282.7 275 58.9
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 4.5e-74 282.0 248 60.5
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 1.3e-73 280.4 181 74.0
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 6.5e-73 278.1 244 63.1
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.9e-72 276.6 243 60.9
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 2.5e-72 276.2 270 57.4
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.2e-72 275.4 251 61.0
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.2e-72 275.4 251 61.0
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 9.3e-72 274.2 246 61.4
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-71 273.5 243 63.4
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.6e-71 273.5 248 59.7
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.0e-70 270.8 285 55.1
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 5.1e-70 268.5 244 59.8
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 6.7e-70 268.1 245 61.2
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 8.7e-70 267.7 159 78.0
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-69 267.3 243 61.3
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.1e-69 267.3 243 61.3
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.5e-69 266.9 232 63.8
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.9e-69 266.5 246 58.5
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 4.3e-69 265.4 243 61.3
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 4.3e-69 265.4 243 61.3
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.3e-68 263.8 250 58.4
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 2.2e-68 263.1 245 61.6
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 2.2e-65 253.1 256 55.9
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.5e-61 240.4 169 70.4
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 2.5e-61 239.6 243 57.6
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 9.1e-59 231.1 130 85.4
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 5.0e-57 225.3 130 82.3
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 1.1e-56 224.2 207 54.6
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 7.2e-56 221.5 250 53.6
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 2.7e-55 219.5 192 65.1
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 4.7e-55 218.8 184 60.9
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.0e-54 217.6 233 53.2
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 3.9e-54 215.7 183 59.6
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 3.5e-50 202.6 110 87.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.3e-49 200.7 131 72.5
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.1e-45 187.6 182 58.8
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 3.7e-44 182.6 191 58.6
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 6.5e-41 171.8 196 54.1
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.5e-37 160.6 90 82.2
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.6e-37 159.8 157 59.2
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.8e-27 127.1 107 58.9
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 5.4e-27 125.6 170 43.5
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.7e-26 121.7 95 61.1
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.6e-23 114.0 96 64.6
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.3e-20 104.4 56 91.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 7.8e-18 95.1 49 87.8
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 1.0e-17 94.7 83 53.0
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-15 87.4 56 76.8
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.6e-10 70.9 64 53.1
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 2.7e-10 70.1 38 76.3
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 1.2e-07 61.2 31 87.1
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 81 56.8
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 81 56.8


User provided reference genes

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