Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.1e-66 256.5 138 100.0
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 9.1e-40 167.2 138 69.6
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.7e-38 162.9 138 68.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 1.1e-37 160.2 145 65.5
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 6.1e-36 154.5 138 65.9
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 5.7e-34 147.9 135 63.7
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.3e-33 146.7 137 62.0
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 2.8e-33 145.6 130 62.3
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.4e-32 143.3 138 63.0
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.8e-32 142.9 143 60.1
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 1.8e-32 142.9 144 59.7
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 5.4e-32 141.4 130 62.3
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 7.0e-32 141.0 143 59.4
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.0e-31 139.4 120 61.7
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 3.5e-31 138.7 129 62.0
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 5.9e-31 137.9 129 62.8
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.3e-30 136.0 134 58.2
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.9e-30 135.6 127 61.4
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 2.9e-30 135.6 133 57.1
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 2.9e-30 135.6 120 61.7
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 2.9e-30 135.6 116 61.2
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 5.0e-30 134.8 124 62.9
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 5.0e-30 134.8 132 56.8
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 6.6e-30 134.4 135 55.6
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-29 133.3 133 56.4
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-29 133.3 133 56.4
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-29 133.3 133 56.4
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 1.9e-29 132.9 121 59.5
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 1.9e-29 132.9 133 54.9
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 3.3e-29 132.1 122 55.7
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 5.5e-29 131.3 131 55.7
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 5.5e-29 131.3 130 54.6
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 7.2e-29 131.0 130 57.7
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 7.2e-29 131.0 137 56.9
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 9.5e-29 130.6 135 55.6
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 9.5e-29 130.6 129 55.0
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.2e-28 130.2 128 53.9
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.2e-28 130.2 122 58.2
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.2e-28 130.2 123 58.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.2e-28 130.2 129 55.0
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 1.6e-28 129.8 139 54.7
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.1e-28 129.4 117 58.1
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 2.8e-28 129.0 135 54.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.8e-28 129.0 118 58.5
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 3.6e-28 128.6 118 56.8
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.7e-28 128.3 128 57.0
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 6.1e-28 127.9 138 55.1
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 8.0e-28 127.5 119 56.3
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 8.0e-28 127.5 133 56.4
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 8.0e-28 127.5 133 53.4
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 8.0e-28 127.5 130 51.5
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.4e-27 126.7 129 55.0
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.8e-27 126.3 139 52.5
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.8e-27 126.3 131 56.5
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.8e-27 126.3 135 57.0
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.8e-27 126.3 134 54.5
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.3e-27 125.9 135 51.9
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.3e-27 125.9 135 51.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 2.3e-27 125.9 130 52.3
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 2.3e-27 125.9 126 57.1
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 5.2e-27 124.8 135 52.6
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 5.2e-27 124.8 125 56.8
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 5.2e-27 124.8 118 57.6
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 6.8e-27 124.4 160 50.0
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.9e-27 124.0 123 58.5
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 8.9e-27 124.0 130 53.8
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 1.5e-26 123.2 135 51.1
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.5e-26 123.2 135 51.9
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 2.0e-26 122.9 135 50.4
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.0e-26 122.9 126 52.4
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.0e-26 122.9 141 52.5
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.0e-26 122.9 130 51.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 3.4e-26 122.1 132 54.5
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 3.4e-26 122.1 134 53.0
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 4.4e-26 121.7 135 50.4
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 9.8e-26 120.6 155 49.7
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.3e-25 120.2 131 51.9
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 1.3e-25 120.2 132 53.0
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.7e-25 119.8 132 53.8
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 2.9e-25 119.0 131 52.7
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 4.9e-25 118.2 136 50.0
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 4.9e-25 118.2 126 53.2
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 4.9e-25 118.2 143 51.0
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.4e-24 116.7 129 51.9
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 3.2e-24 115.5 137 49.6
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.1e-24 115.2 118 50.8
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 5.4e-24 114.8 128 51.6
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 9.2e-24 114.0 120 52.5
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 9.2e-24 114.0 120 52.5
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 9.2e-24 114.0 153 47.7
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 5.9e-23 111.3 134 50.0
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 2.5e-21 105.9 135 45.9
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 7.3e-21 104.4 136 44.9
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 9.5e-21 104.0 133 47.4
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.6e-20 102.1 110 55.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 6.1e-20 101.3 77 64.9
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 1.0e-19 100.5 136 43.4
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.8e-19 99.8 82 63.4
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 4.0e-19 98.6 160 43.8
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 3.4e-18 95.5 82 58.5
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 9.8e-18 94.0 114 52.6
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 2.2e-17 92.8 77 59.7
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.1e-16 90.5 104 51.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 7.0e-16 87.8 66 62.1
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.3e-14 83.6 127 41.7
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 3.0e-14 82.4 127 40.9
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 9.5e-13 77.4 104 48.1
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 1.8e-11 73.2 139 37.4
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 5.2e-11 71.6 128 36.7
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.3e-09 67.0 103 41.7
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.3e-09 67.0 103 41.7
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 3.7e-09 65.5 97 42.3
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 6.4e-09 64.7 97 42.3
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 8.3e-09 64.3 125 34.4
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 1.9e-08 63.2 89 40.4
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 3.2e-08 62.4 84 46.4
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 4.1e-08 62.0 97 41.2
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 5.4e-08 61.6 96 40.6
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 3.5e-07 58.9 70 55.7
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 3.5e-07 58.9 47 63.8
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 6.6e-06 54.7 53 49.1


User provided reference genes

Program Settings