Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00530 Erythranthe guttata HOM05D001944 ORTHO05D017225 1.2e-200 703.0 364 100.0
SGA_v2.0_scaffold40G15544 Striga asiatica HOM05D001944 ORTHO05D002405 1.5e-25 121.3 267 38.6
SalBow3G2448 Salvia bowleyana HOM05D001944 ORTHO05D002405 1.9e-23 114.4 215 40.5
SGA_v2.0_scaffold40G15535 Striga asiatica HOM05D001944 ORTHO05D017225 9.2e-23 112.1 273 36.6
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 3.9e-13 80.1 199 35.2
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.1e-12 78.6 363 28.1
Dinv37298 Davidia involucrata HOM05D001944 ORTHO05D002405 9.5e-12 75.5 106 43.4
CSS0041121 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 2.1e-11 74.3 150 36.7
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 2.1e-11 74.3 260 31.2
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 4.7e-11 73.2 266 30.5
Cpa.g.sc311.2 Carica papaya HOM05D001944 ORTHO05D002405 1.1e-10 72.0 254 30.7
Duzib128G0909 Durio zibethinus HOM05D001944 ORTHO05D002405 1.4e-10 71.6 223 33.2
CSS0009803 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 3.1e-10 70.5 150 36.0
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 4.0e-10 70.1 227 32.2
Nitab4.5_0000101g0280 Nicotiana tabacum HOM05D001944 ORTHO05D002405 4.0e-10 70.1 255 29.4
Solyc10g011940.1 Solanum lycopersicum HOM05D001944 ORTHO05D002405 4.0e-10 70.1 300 28.0
vmacro20024 Vaccinium macrocarpon HOM05D001944 ORTHO05D017225 6.8e-10 69.3 78 48.7
Glyma.12G175400 Glycine max HOM05D001944 ORTHO05D002405 8.9e-10 68.9 289 27.7
PGSC0003DMG400019409 Solanum tuberosum HOM05D001944 ORTHO05D002405 8.9e-10 68.9 312 27.9
Oeu036621.1 Olea europaea HOM05D001944 ORTHO05D002405 2.0e-09 67.8 244 29.5
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 2.0e-09 67.8 244 30.3
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 2.0e-09 67.8 232 29.7
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 3.4e-09 67.0 288 28.5
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 3.4e-09 67.0 263 29.3
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 4.4e-09 66.6 306 28.8
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 4.4e-09 66.6 306 28.8
COL.COLO4_18305 Corchorus olitorius HOM05D001944 ORTHO05D002405 4.4e-09 66.6 203 31.0
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 9.9e-09 65.5 256 28.1
Sopen10g005720 Solanum pennellii HOM05D001944 ORTHO05D002405 9.9e-09 65.5 160 30.0
Nitab4.5_0005320g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.3e-08 65.1 339 26.0
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 1.3e-08 65.1 296 26.4
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.3e-08 65.1 201 33.8
Peaxi162Scf00123g00910 Petunia axillaris HOM05D001944 ORTHO05D002405 1.7e-08 64.7 336 27.1
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 2.2e-08 64.3 206 32.0
Sed0024562 Sechium edule HOM05D001944 ORTHO05D002405 2.9e-08 63.9 75 49.3
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 3.7e-08 63.5 216 29.2
QL93p2013_0009 Quercus lobata HOM05D001944 ORTHO05D002405 4.9e-08 63.2 204 31.9
QL07p044103 Quercus lobata HOM05D001944 ORTHO05D002405 6.4e-08 62.8 317 27.4
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.1e-07 62.0 199 31.2
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 1.1e-07 62.0 203 31.5
Ca_19290_v3 Cicer arietinum L. HOM05D001944 ORTHO05D011318 1.4e-07 61.6 261 28.7
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 2.4e-07 60.8 243 28.8
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 2.4e-07 60.8 204 28.4
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 2.4e-07 60.8 165 31.5
Sed0004333 Sechium edule HOM05D001944 ORTHO05D002405 2.4e-07 60.8 194 33.5
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 3.2e-07 60.5 214 30.8
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 3.2e-07 60.5 222 29.7
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 3.2e-07 60.5 229 29.7
Psat7g192240 Pisum sativum HOM05D001944 ORTHO05D011318 4.1e-07 60.1 86 39.5
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 5.4e-07 59.7 316 24.4
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 5.4e-07 59.7 293 27.6
Thecc.05G062600 Theobroma cacao HOM05D001944 ORTHO05D002405 5.4e-07 59.7 76 46.1
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 7.1e-07 59.3 288 27.8
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 7.1e-07 59.3 321 25.5
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 9.2e-07 58.9 102 36.3
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 9.2e-07 58.9 231 28.6
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 9.2e-07 58.9 284 28.9
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 9.2e-07 58.9 237 25.7
VMungo1080G1631 Vigna mungo HOM05D001944 ORTHO05D002405 9.2e-07 58.9 292 24.0
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 1.2e-06 58.5 348 26.4
Lsat_1_v5_gn_1_53160 Lactuca sativa HOM05D001944 ORTHO05D002405 1.2e-06 58.5 78 42.3
Lj1A201T36 Lonicera japonica HOM05D001944 ORTHO05D002405 1.2e-06 58.5 108 36.1
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 1.6e-06 58.2 176 28.4
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.1e-06 57.8 151 31.1
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.1e-06 57.8 274 27.4
Phvul.011G081700 Phaseolus vulgaris HOM05D001944 ORTHO05D011318 2.7e-06 57.4 303 26.1
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 2.7e-06 57.4 399 23.6
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.7e-06 57.4 206 29.6
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 3.5e-06 57.0 227 26.9
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 3.5e-06 57.0 204 29.9
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 3.5e-06 57.0 77 44.2
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 6.0e-06 56.2 251 25.5
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 6.0e-06 56.2 129 33.3
Lalb_Chr01g0004401 Lupinus albus HOM05D001944 ORTHO05D011318 6.0e-06 56.2 235 26.8
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 6.0e-06 56.2 234 29.1
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 6.0e-06 56.2 79 44.3
EL10Ac7g16595 Beta vulgaris HOM05D001944 ORTHO05D002405 7.8e-06 55.8 150 32.0
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 7.8e-06 55.8 109 38.5
Cc06_g04010 Coffea canephora HOM05D001944 ORTHO05D002405 7.8e-06 55.8 123 32.5
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 7.8e-06 55.8 211 29.9


User provided reference genes

Program Settings