Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00487 Erythranthe guttata HOM05D001186 ORTHO05D000971 2.2e-101 372.5 210 100.0
Migut.L01057 Erythranthe guttata HOM05D001186 ORTHO05D000971 3.5e-43 179.1 213 53.5
MSTRG.847 Avicennia marina HOM05D001186 ORTHO05D000971 2.7e-27 126.3 235 39.6
TAR629G3519 Trochodendron aralioides HOM05D001186 ORTHO05D000971 4.5e-22 109.0 240 35.0
SalBow8G5321 Salvia bowleyana HOM05D001186 ORTHO05D000971 3.8e-21 105.9 217 38.2
Manes.14G103400 Manihot esculenta HOM05D001186 ORTHO05D000971 1.4e-18 97.4 220 35.5
Aqoxy3G00278 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 3.9e-18 95.9 240 35.4
QL01p041163 Quercus lobata HOM05D001186 ORTHO05D000971 4.3e-17 92.4 224 32.6
COL.COLO4_07638 Corchorus olitorius HOM05D001186 ORTHO05D000971 5.7e-17 92.0 208 34.1
CiPaw.15G086400 Carya illinoinensis HOM05D001186 ORTHO05D000971 7.4e-17 91.7 182 36.8
Hma1.2p1_0061F.1_g033760 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 9.7e-17 91.3 224 37.1
TAR371G0320 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.8e-16 89.7 220 34.5
TWI31G0680 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 4.8e-16 89.0 193 35.8
Thecc.02G227800 Theobroma cacao HOM05D001186 ORTHO05D000971 6.3e-16 88.6 218 34.4
Dinv28111 Davidia involucrata HOM05D001186 ORTHO05D000971 1.1e-15 87.8 198 37.9
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 1.1e-15 87.8 194 34.0
Manes.06G067000 Manihot esculenta HOM05D001186 ORTHO05D000971 1.4e-15 87.4 228 33.3
Gohir.A05G321500 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.8e-15 87.0 203 33.5
Nn3g17865 Nelumbo nucifera HOM05D001186 ORTHO05D000971 1.8e-15 87.0 124 54.0
Nn4g23866 Nelumbo nucifera HOM05D001186 ORTHO05D000971 3.1e-15 86.3 238 42.0
Nitab4.5_0000489g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 4.1e-15 85.9 213 31.5
Gorai.009G347500 Gossypium raimondii HOM05D001186 ORTHO05D000971 6.9e-15 85.1 203 34.5
PGR119G2222 Punica granatum HOM05D001186 ORTHO05D000971 2.0e-14 83.6 234 32.5
unitig_22.g6558 Utricularia gibba HOM05D001186 ORTHO05D000971 2.0e-14 83.6 210 33.3
Atru.chr11.114 Acer truncatum HOM05D001186 ORTHO05D000971 3.4e-14 82.8 211 32.7
Cc11_g10020 Coffea canephora HOM05D001186 ORTHO05D000971 1.0e-13 81.3 205 32.2
QL10p025510 Quercus lobata HOM05D001186 ORTHO05D000971 1.3e-13 80.9 218 31.2
Haze_17495 Corylus avellana HOM05D001186 ORTHO05D000971 2.2e-13 80.1 214 37.4
Oeu034232.1 Olea europaea HOM05D001186 ORTHO05D000971 2.2e-13 80.1 219 32.4
Potri.010G123700 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.2e-13 80.1 226 30.5
Gohir.D05G323700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.9e-13 79.7 199 32.7
MBI09_g40766_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 2.9e-13 79.7 232 31.5
Duzib268G0437 Durio zibethinus HOM05D001186 ORTHO05D000971 5.0e-13 79.0 222 30.6
CSS0012233 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.1e-12 77.8 201 37.8
DCAR_023208 Daucus carota HOM05D001186 ORTHO05D000971 1.4e-12 77.4 175 33.1
Hma1.2p1_0653F.1_g196240 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 1.9e-12 77.0 203 39.9
SGA_v2.0_scaffold38G14938 Striga asiatica HOM05D001186 ORTHO05D000971 1.9e-12 77.0 195 34.4
ATR1125G102 Amborella trichopoda HOM05D001186 ORTHO05D000971 5.5e-12 75.5 174 32.8
Gohir.D08G105100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 5.5e-12 75.5 202 30.2
Lalb_Chr04g0254691 Lupinus albus HOM05D001186 ORTHO05D000971 5.5e-12 75.5 183 32.2
ECA233G1982 Erigeron canadensis HOM05D001186 ORTHO05D000971 9.4e-12 74.7 197 29.9
MD16G1041600 Malus domestica HOM05D001186 ORTHO05D000971 9.4e-12 74.7 225 31.6
CiPaw.15G086500 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.6e-11 73.9 186 32.3
Dinv21073 Davidia involucrata HOM05D001186 ORTHO05D000971 1.6e-11 73.9 175 36.6
Lalb_Chr21g0308871 Lupinus albus HOM05D001186 ORTHO05D000971 2.1e-11 73.6 176 33.5
Gorai.004G112000 Gossypium raimondii HOM05D001186 ORTHO05D000971 2.7e-11 73.2 202 30.2
Sabra10G0093700 Salix brachista HOM05D001186 ORTHO05D000971 2.7e-11 73.2 210 35.2
Gohir.A08G093800 Gossypium hirsutum HOM05D001186 ORTHO05D000971 3.6e-11 72.8 202 30.2
QL01p041179 Quercus lobata HOM05D001186 ORTHO05D000971 3.6e-11 72.8 100 44.0
FAN07G0491 Fragaria x ananassa HOM05D001186 ORTHO05D000971 7.9e-11 71.6 206 30.6
Cpa.g.c39771 Carica papaya HOM05D001186 ORTHO05D000971 1.0e-10 71.2 119 38.7
CiPaw.16G065400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.0e-10 71.2 101 44.6
Cfa019761 Carpinus fangiana HOM05D001186 ORTHO05D000971 1.8e-10 70.5 213 27.2
Cpa.g.sc3.505 Carica papaya HOM05D001186 ORTHO05D000971 2.3e-10 70.1 104 40.4
Glyma.10G273300 Glycine max HOM05D001186 ORTHO05D000971 3.0e-10 69.7 175 32.6
Phvul.007G028200 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 3.0e-10 69.7 202 34.2
FAN17G0570 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.9e-10 69.3 213 30.0
Lalb_Chr06g0166031 Lupinus albus HOM05D001186 ORTHO05D000971 3.9e-10 69.3 196 32.1
FvH4_4g27220 Fragaria vesca HOM05D001186 ORTHO05D000971 5.1e-10 68.9 204 29.4
RcHm_v2.0_Chr4g0435011 Rosa chinensis HOM05D001186 ORTHO05D000971 5.1e-10 68.9 209 31.6
Ciclev10023791m.g Citrus clementina HOM05D001186 ORTHO05D000971 8.8e-10 68.2 186 30.6
FAN12G0246 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.1e-09 67.8 208 29.3
FAN12G0708 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.1e-09 67.8 208 29.3
Rhsim08G0133100 Rhododendron simsii HOM05D001186 ORTHO05D000971 1.5e-09 67.4 89 48.3
Sabra12G0039700 Salix brachista HOM05D001186 ORTHO05D000971 1.5e-09 67.4 204 31.9
FAN22G0160 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.0e-09 67.0 208 28.8
Dinv15684 Davidia involucrata HOM05D012236 ORTHO05D001602 3.3e-09 66.2 131 41.2
Manes.01G010900 Manihot esculenta HOM05D001186 ORTHO05D000971 3.3e-09 66.2 207 31.9
Oeu008243.1 Olea europaea HOM05D001186 ORTHO05D000971 3.3e-09 66.2 102 42.2
Potri.015G046600 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.3e-09 66.2 202 30.2
Sed0003786 Sechium edule HOM05D001186 ORTHO05D000971 3.3e-09 66.2 178 35.4
CSS0040830 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 4.4e-09 65.9 90 47.8
Lsat_1_v5_gn_8_40921 Lactuca sativa HOM05D001186 ORTHO05D000971 4.4e-09 65.9 201 29.9
Oeu001004.1 Olea europaea HOM05D001186 ORTHO05D000971 4.4e-09 65.9 93 45.2
VMungo0464G1252 Vigna mungo HOM05D001186 ORTHO05D000971 4.4e-09 65.9 224 29.0
Sabra15G0039100 Salix brachista HOM05D001186 ORTHO05D000971 5.7e-09 65.5 178 30.9
PSO675G7373 Papaver somniferum HOM05D001186 ORTHO05D000971 9.7e-09 64.7 94 55.3
PSO541G6297 Papaver somniferum HOM05D001186 ORTHO05D000971 1.3e-08 64.3 95 54.7
Potri.012G055900 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.3e-08 64.3 196 30.1
Rhsim09G0107000 Rhododendron simsii HOM05D001186 ORTHO05D000971 1.7e-08 63.9 89 44.9
Haze_18687 Corylus avellana HOM05D001186 ORTHO05D000971 2.2e-08 63.5 178 28.7
FvH4_5g11980 Fragaria vesca HOM05D001186 ORTHO05D000971 2.2e-08 63.5 110 49.1
Medtr6g084200 Medicago truncatula HOM05D001186 ORTHO05D000971 2.8e-08 63.2 113 45.1
CANSAT01G1945 Cannabis sativa HOM05D001186 ORTHO05D000971 3.7e-08 62.8 100 40.0
FAN18G1152 Fragaria x ananassa HOM05D001186 ORTHO05D000971 4.8e-08 62.4 122 45.1
arahy.Tifrunner.gnm1.ann1.MZ5XB8 Arachis hypogaea HOM05D001186 ORTHO05D000971 6.3e-08 62.0 87 43.7
Carub.0003s1814 Capsella rubella HOM05D001186 ORTHO05D000971 6.3e-08 62.0 82 52.4
FAN18G4498 Fragaria x ananassa HOM05D001186 ORTHO05D000971 6.3e-08 62.0 123 44.7
Glyma.07G092500 Glycine max HOM05D001186 ORTHO05D000971 6.3e-08 62.0 194 29.4
Ca_25487_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 8.2e-08 61.6 145 33.8
MELO3C010713.2 Cucumis melo HOM05D001186 ORTHO05D000971 8.2e-08 61.6 223 26.9
Lj5g0015241 Lotus japonicus HOM05D001186 ORTHO05D000971 1.1e-07 61.2 186 29.6
TWI79G1623 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 1.1e-07 61.2 196 33.7
AL3G31640 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 1.4e-07 60.8 88 43.2
TPR.G15166 Trifolium pratense HOM05D001186 ORTHO05D000971 1.4e-07 60.8 217 29.5
Rhsim03G0008700 Rhododendron simsii HOM05D001186 ORTHO05D000971 2.4e-07 60.1 190 36.3
CSS0032299 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 3.1e-07 59.7 189 29.1
Lj2g0018313 Lotus japonicus HOM05D001186 ORTHO05D000971 3.1e-07 59.7 82 43.9
Lalb_Chr22g0353121 Lupinus albus HOM05D001186 ORTHO05D000971 3.1e-07 59.7 134 34.3
Nitab4.5_0001674g0050 Nicotiana tabacum HOM05D001186 ORTHO05D000971 3.1e-07 59.7 90 43.3
Prupe.1G312500 Prunus persica HOM05D001186 ORTHO05D000971 4.1e-07 59.3 216 32.9
Aa31LG8G5190 Aethionema arabicum HOM05D001186 ORTHO05D000971 5.3e-07 58.9 80 46.2
ClCG06G014760 Citrullus lanatus HOM05D001186 ORTHO05D000971 5.3e-07 58.9 108 42.6
HanXRQChr12g0364631 Helianthus annuus HOM05D001186 ORTHO05D000971 5.3e-07 58.9 195 28.7
Lj2g0004597 Lotus japonicus HOM05D001186 ORTHO05D000971 7.0e-07 58.5 206 33.0
HanXRQChr12g0364621 Helianthus annuus HOM05D001186 ORTHO05D000971 9.1e-07 58.2 102 35.3
TPR.G18807 Trifolium pratense HOM05D001186 ORTHO05D000971 9.1e-07 58.2 177 30.5
AT3G18360 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 1.2e-06 57.8 83 42.2
Cpa.g.sc1.29 Carica papaya HOM05D001186 ORTHO05D000971 1.2e-06 57.8 88 42.0
Ciclev10023693m.g Citrus clementina HOM05D001186 ORTHO05D000971 1.2e-06 57.8 183 28.4
MELO3C017312.2 Cucumis melo HOM05D001186 ORTHO05D000971 1.2e-06 57.8 94 46.8
FAN13G2378 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.2e-06 57.8 109 45.9
CARHR093710 Cardamine hirsuta HOM05D001186 ORTHO05D000971 1.5e-06 57.4 101 38.6
Duzib205G0230 Durio zibethinus HOM05D001186 ORTHO05D000971 1.5e-06 57.4 214 29.9
Medtr1g110570 Medicago truncatula HOM05D001186 ORTHO05D000971 1.5e-06 57.4 174 28.7
BcaC09g48794 Brassica carinata HOM05D001186 ORTHO05D000971 2.0e-06 57.0 83 45.8
A01p35980 Brassica napus HOM05D001186 ORTHO05D000971 2.0e-06 57.0 83 45.8
C01p45850 Brassica napus HOM05D001186 ORTHO05D000971 2.0e-06 57.0 83 45.8
BolC1t04547H Brassica oleracea HOM05D001186 ORTHO05D000971 2.0e-06 57.0 83 45.8
BraA01t03679Z Brassica rapa HOM05D001186 ORTHO05D000971 2.0e-06 57.0 83 45.8
CsaV3_1G003880 Cucumis sativus L. HOM05D001406 ORTHO05D002467 2.0e-06 57.0 115 45.2
CsaV3_2G025160 Cucumis sativus L. HOM05D001186 ORTHO05D000971 2.0e-06 57.0 35 71.4
FAN08G3585 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.6e-06 56.6 106 46.2
Glyma.20G116600 Glycine max HOM05D001186 ORTHO05D000971 3.5e-06 56.2 120 35.8
HPP92_004813 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.5e-06 56.2 118 35.6
FAN04G0269 Fragaria x ananassa HOM05D001186 ORTHO05D000971 5.9e-06 55.5 104 46.2
Sed0016046 Sechium edule HOM05D001186 ORTHO05D000971 5.9e-06 55.5 97 39.2
CAN.G1425.4 Capsicum annuum HOM05D001186 ORTHO05D000971 7.7e-06 55.1 76 43.4
CAN.G423.13 Capsicum annuum HOM05D001926 ORTHO05D000971 7.7e-06 55.1 80 42.5
Eucgr.G02312 Eucalyptus grandis HOM05D001186 ORTHO05D000971 7.7e-06 55.1 152 30.3
Thhalv10022101m.g Eutrema salsugineum HOM05D001186 ORTHO05D000971 7.7e-06 55.1 79 44.3


User provided reference genes

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