Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 3.6e-266 921.0 464 100.0
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 2.9e-170 602.4 449 65.3
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.4e-161 573.5 454 61.5
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 1.0e-159 567.4 454 62.1
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.7e-159 566.6 454 60.8
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 1.1e-158 563.9 455 60.4
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 4.0e-156 555.4 454 61.7
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 5.2e-156 555.1 462 60.4
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 1.2e-155 553.9 461 60.1
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.5e-155 553.5 454 61.2
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 3.4e-155 552.4 465 58.5
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 4.9e-154 548.5 451 60.5
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 2.7e-152 542.7 462 57.8
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 1.9e-150 536.6 419 62.1
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 8.9e-148 527.7 496 56.0
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 1.2e-147 527.3 463 56.6
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 1.5e-147 526.9 464 56.0
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 6.4e-146 521.5 459 57.1
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 1.1e-145 520.8 461 55.1
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.1e-145 520.8 459 57.5
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 1.2e-144 517.3 458 55.5
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 2.1e-144 516.5 455 54.9
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 2.7e-144 516.2 459 56.9
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 4.6e-144 515.4 461 54.9
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 4.6e-144 515.4 454 56.2
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 7.8e-144 514.6 454 54.6
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.3e-143 513.8 462 54.1
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 1.1e-142 510.8 458 55.7
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 1.5e-142 510.4 464 53.4
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 2.5e-142 509.6 458 55.9
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 3.3e-142 509.2 466 54.5
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 2.1e-141 506.5 463 53.8
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 1.4e-140 503.8 440 58.2
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 4.0e-140 502.3 445 53.5
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 5.3e-140 501.9 455 55.6
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 2.0e-139 500.0 464 54.1
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 4.4e-139 498.8 513 50.5
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 9.9e-139 497.7 469 52.5
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 2.2e-138 496.5 452 54.4
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 1.1e-137 494.2 467 52.9
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 1.1e-137 494.2 467 52.9
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 1.6e-136 490.3 452 54.2
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 7.9e-136 488.0 466 52.4
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 7.9e-136 488.0 467 52.7
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 1.3e-135 487.3 451 53.4
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 3.0e-135 486.1 464 51.5
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 5.1e-135 485.3 452 53.1
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 5.1e-135 485.3 459 50.1
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 1.1e-134 484.2 463 52.1
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 1.3e-133 480.7 463 49.2
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 2.8e-133 479.6 457 52.7
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 4.8e-133 478.8 468 49.6
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 1.1e-132 477.6 468 49.8
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 2.6e-131 473.0 465 51.2
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 3.4e-131 472.6 464 50.4
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 3.4e-131 472.6 467 50.1
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 9.9e-131 471.1 458 51.1
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 9.9e-131 471.1 448 50.9
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 2.2e-130 469.9 457 50.1
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 2.9e-130 469.5 448 51.1
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 1.4e-129 467.2 451 49.7
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 1.9e-129 466.8 463 50.3
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 9.3e-129 464.5 461 49.2
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 1.2e-128 464.2 465 48.8
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 1.6e-128 463.8 449 49.2
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 1.6e-128 463.8 450 49.1
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 1.6e-128 463.8 458 50.4
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 2.7e-128 463.0 448 50.4
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 4.6e-128 462.2 452 49.1
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.0e-127 461.1 460 50.9
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 1.3e-127 460.7 449 49.0
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 1.8e-127 460.3 454 48.5
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 2.3e-127 459.9 454 48.7
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 3.0e-127 459.5 452 48.9
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 5.1e-127 458.8 465 51.6
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 6.7e-127 458.4 448 50.0
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 6.7e-127 458.4 463 50.1
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 8.7e-127 458.0 455 50.8
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 1.9e-126 456.8 457 51.9
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 2.5e-126 456.4 458 48.7
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 2.5e-126 456.4 463 47.3
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 4.3e-126 455.7 450 48.0
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 5.6e-126 455.3 458 52.6
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 3.7e-125 452.6 449 51.2
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 1.4e-124 450.7 466 47.9
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 2.4e-124 449.9 459 52.1
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.5e-123 445.7 433 51.0
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 2.9e-122 443.0 442 50.7
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.9e-121 440.3 433 50.6
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 5.5e-121 438.7 450 47.6
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 2.7e-120 436.4 456 50.4
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.3e-119 434.1 423 52.2
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 2.3e-119 433.3 424 50.2
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 3.9e-119 432.6 466 48.5
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.5e-118 430.6 452 50.0
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 1.5e-115 420.6 448 47.1
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 1.0e-114 417.9 448 46.7
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 3.8e-114 416.0 437 48.7
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.2e-112 411.0 407 49.1
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 9.0e-108 394.8 468 43.6
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 6.5e-106 388.7 459 44.2
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 1.2e-104 384.4 446 43.7
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 9.7e-102 374.8 411 47.4
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 4.8e-101 372.5 455 44.6
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 4.8e-93 345.9 424 46.5
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 2.2e-85 320.5 426 39.7
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 1.8e-84 317.4 292 53.4
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 5.9e-83 312.4 359 43.2
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 5.9e-83 312.4 359 43.2
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 3.0e-79 300.1 278 52.9
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 5.2e-79 299.3 472 36.7
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 1.4e-76 291.2 488 36.3
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 2.5e-73 280.4 321 48.3
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 4.4e-70 269.6 471 36.3
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.1e-60 238.4 483 32.5
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 5.2e-55 219.5 511 29.0
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 1.4e-44 184.9 355 34.4
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 7.1e-44 182.6 193 49.2
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 5.1e-42 176.4 161 53.4
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 2.5e-41 174.1 161 52.2
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 9.5e-41 172.2 357 29.7
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 1.9e-33 147.9 378 25.9
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 4.7e-32 143.3 225 35.1
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 8.1e-32 142.5 126 46.8
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 8.1e-32 142.5 126 46.8
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 3.1e-31 140.6 447 22.8
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.0e-30 137.9 123 46.3
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 1.7e-29 134.8 125 49.6
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 4.2e-28 130.2 111 55.9
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 9.3e-28 129.0 306 29.4
Aqoxy4G01950 Aquilegia oxysepala HOM05D002435 ORTHO05D002550 1.5e-25 121.7 248 36.7
CARHR271620 Cardamine hirsuta HOM05D005294 ORTHO05D006720 4.3e-25 120.2 105 54.3
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 1.0e-18 99.0 73 64.4
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.6e-16 91.7 118 39.0
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.4e-12 78.6 170 31.8
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 1.9e-12 78.2 80 46.2
Zm00001eb382850 Zea mays HOM05D005294 ORTHO05D006720 3.2e-12 77.4 102 42.2
Zm00001eb383990 Zea mays HOM05D005294 ORTHO05D006720 2.1e-11 74.7 66 56.1


User provided reference genes

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