Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 0.0e+00 1387.5 848 100.0
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 2.7e-259 899.0 858 66.3
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 6.4e-253 877.9 834 71.9
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 1.5e-225 786.9 833 66.1
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 3.0e-202 709.5 860 59.7
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 4.4e-201 705.7 863 59.6
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 9.1e-199 698.0 860 59.7
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 1.0e-197 694.5 860 59.7
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 9.5e-196 688.0 855 58.9
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.4e-194 684.1 859 53.6
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 2.3e-194 683.3 799 62.5
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 2.3e-189 666.8 847 58.7
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 3.6e-187 659.4 854 56.7
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 7.5e-185 651.7 794 59.2
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 3.7e-184 649.4 763 60.3
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 1.7e-181 640.6 822 58.0
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 3.9e-181 639.4 853 57.4
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 2.5e-180 636.7 823 56.9
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 4.0e-178 629.4 868 55.0
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 5.4e-175 619.0 849 54.5
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 1.6e-174 617.5 836 55.4
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 2.0e-174 617.1 856 56.0
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 7.8e-174 615.1 839 55.3
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.0e-173 614.8 840 55.7
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 2.3e-173 613.6 850 54.9
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 3.0e-173 613.2 848 55.4
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 9.5e-172 608.2 838 55.3
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 1.2e-171 607.8 799 51.2
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 1.1e-170 604.7 787 56.8
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 1.8e-170 604.0 824 55.7
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 4.4e-169 599.4 854 54.9
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 7.5e-169 598.6 846 54.5
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 2.2e-168 597.0 831 55.8
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 3.7e-168 596.3 798 56.5
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.1e-167 594.7 828 55.0
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 4.1e-167 592.8 866 53.3
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 4.1e-167 592.8 866 53.3
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 5.4e-167 592.4 827 55.1
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 5.4e-167 592.4 827 55.1
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 5.4e-167 592.4 797 57.0
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 9.2e-167 591.7 788 56.9
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.2e-166 591.3 869 53.7
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 2.1e-166 590.5 842 54.3
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 6.0e-166 589.0 690 62.0
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 1.9e-164 583.9 792 55.4
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 2.5e-164 583.6 777 57.9
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 4.3e-164 582.8 855 53.3
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 5.6e-164 582.4 869 48.1
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 1.2e-163 581.3 741 56.8
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 4.7e-163 579.3 834 54.3
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 8.1e-163 578.6 832 52.6
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 3.1e-162 576.6 867 52.5
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.4e-161 573.2 845 49.6
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.3e-160 571.2 720 59.4
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 4.1e-159 566.2 836 53.0
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 5.4e-159 565.8 813 54.9
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 9.2e-159 565.1 846 53.9
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 1.5e-156 557.8 847 52.5
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 4.3e-156 556.2 857 50.2
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 2.8e-155 553.5 868 46.8
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 3.6e-155 553.1 846 53.3
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 4.7e-155 552.7 852 52.5
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 8.1e-155 552.0 846 53.1
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 3.4e-153 546.6 824 53.5
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 2.4e-151 540.4 875 46.3
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 2.4e-151 540.4 737 54.1
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 5.4e-151 539.3 851 45.2
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.6e-150 537.7 781 46.4
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 4.6e-150 536.2 837 52.6
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 6.0e-150 535.8 819 52.7
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 7.8e-150 535.4 781 46.4
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 6.6e-149 532.3 853 51.0
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 1.5e-148 531.2 813 52.3
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 4.3e-148 529.6 814 51.6
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 8.1e-147 525.4 809 52.5
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 2.0e-145 520.8 811 52.3
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 2.2e-144 517.3 846 50.6
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 6.4e-144 515.8 700 55.6
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 6.4e-144 515.8 842 51.7
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 4.6e-142 509.6 856 43.2
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 2.5e-140 503.8 853 49.9
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 4.0e-138 496.5 886 49.3
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 2.5e-132 477.2 848 48.6
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 4.5e-129 466.5 775 41.2
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 2.3e-125 454.1 810 42.8
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 3.9e-125 453.4 772 50.3
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 1.6e-115 421.4 597 59.5
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.7e-107 394.8 799 46.1
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 1.0e-104 385.6 346 73.7
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 6.1e-94 349.7 571 49.2
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 3.8e-88 330.5 650 34.6
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 2.5e-87 327.8 521 58.5
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 5.9e-73 280.0 809 41.7
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 2.9e-67 261.2 305 63.0
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 6.4e-67 260.0 530 52.3
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 8.9e-61 239.6 820 38.3
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 1.2e-57 229.2 228 57.5
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 3.9e-56 224.2 250 46.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 4.3e-55 220.7 827 37.5
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 2.4e-50 204.9 170 60.6
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 8.1e-46 189.9 229 48.9
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 2.3e-40 171.8 311 50.2
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 5.1e-40 170.6 493 33.9
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.8e-24 119.0 133 51.1
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 4.9e-19 100.9 204 34.8
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 3.5e-17 94.7 105 47.6
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 3.3e-15 88.2 74 60.8
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 2.9e-11 75.1 237 45.1
VMungo1215G1316 Vigna mungo HOM05D000001 ORTHO05D000003 3.3e-07 61.6 175 24.0
Sopen10g021030 Solanum pennellii HOM05D007173 ORTHO05D009151 5.7e-07 60.8 160 23.8
CAN.G930.13 Capsicum annuum HOM05D007173 ORTHO05D009151 9.7e-07 60.1 146 25.3
PGSC0003DMG401009781 Solanum tuberosum HOM05D007173 ORTHO05D009151 9.7e-07 60.1 146 25.3
Solyc10g049570.3 Solanum lycopersicum HOM05D007173 ORTHO05D009151 1.6e-06 59.3 160 24.4
Migut.F00214 Erythranthe guttata HOM05D006156 ORTHO05D007699 3.7e-06 58.2 110 33.6
Oeu041055.1 Olea europaea HOM05D006156 ORTHO05D007699 4.8e-06 57.8 110 32.7


User provided reference genes

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