Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.0e-289 998.4 510 100.0
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.1e-223 780.0 508 74.6
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 1.9e-215 752.7 510 73.5
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 5.3e-202 708.0 511 69.5
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.8e-186 656.4 511 65.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.5e-185 651.7 510 64.9
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-184 650.2 512 65.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.7e-184 649.8 511 64.8
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 4.2e-183 645.2 511 65.2
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 8.0e-182 641.0 549 61.4
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.0e-181 640.6 512 62.7
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 3.0e-181 639.0 511 63.2
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 5.7e-180 634.8 511 62.0
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 7.5e-180 634.4 511 62.0
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 7.5e-180 634.4 511 62.2
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 9.7e-180 634.0 525 62.7
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 1.3e-179 633.6 511 62.4
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.3e-179 633.6 510 63.1
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.2e-179 632.9 511 61.4
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 3.7e-179 632.1 511 62.2
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 8.2e-179 630.9 511 63.6
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.1e-178 629.0 511 62.8
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 5.3e-178 628.2 512 62.7
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 5.9e-177 624.8 529 60.9
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.5e-175 620.2 510 62.0
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 5.5e-175 618.2 511 61.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 9.4e-175 617.5 512 63.9
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.2e-174 617.1 511 61.6
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.0e-173 612.1 511 62.6
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 6.8e-173 611.3 511 62.4
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.5e-172 610.1 511 62.4
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 1.5e-172 610.1 511 61.1
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.5e-172 607.8 511 62.2
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 2.2e-171 606.3 511 59.9
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 2.2e-171 606.3 511 60.5
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 2.2e-171 606.3 510 60.6
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.4e-170 603.6 510 59.6
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 4.1e-170 602.1 552 56.0
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 2.7e-169 599.4 513 58.3
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 4.5e-169 598.6 553 57.7
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 7.7e-169 597.8 522 60.2
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 7.7e-169 597.8 512 60.9
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 5.0e-168 595.1 511 61.3
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 5.0e-168 595.1 511 59.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.5e-168 594.7 516 58.7
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 8.6e-168 594.3 515 59.0
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.2e-167 591.3 512 60.2
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.1e-166 589.7 514 58.6
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.8e-165 586.6 462 66.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.8e-165 586.6 511 59.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.8e-165 586.6 511 58.1
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 6.8e-165 584.7 510 59.8
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.2e-164 583.9 505 60.6
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 3.4e-164 582.4 510 57.3
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 3.4e-164 582.4 510 59.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 7.5e-164 581.3 512 59.4
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 7.5e-164 581.3 511 58.9
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.3e-163 580.5 511 57.5
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.8e-163 579.3 513 58.5
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.9e-163 578.6 511 57.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 6.3e-163 578.2 513 57.7
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 6.3e-163 578.2 517 58.4
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.4e-162 577.0 516 57.9
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 3.1e-162 575.9 520 57.9
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 5.4e-162 575.1 460 64.6
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.2e-161 573.9 515 58.3
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 2.0e-161 573.2 516 58.7
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 5.9e-161 571.6 494 59.9
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 7.8e-161 571.2 458 65.5
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.3e-160 570.5 521 59.3
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.3e-160 570.5 460 63.5
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 2.3e-160 569.7 514 57.0
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 6.6e-160 568.2 516 57.2
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 6.6e-160 568.2 512 58.6
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.9e-159 566.6 522 57.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 9.5e-159 564.3 519 57.4
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.1e-158 563.1 542 57.0
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 3.6e-158 562.4 515 57.1
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.4e-157 560.5 516 57.2
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 3.4e-156 555.8 521 56.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 2.2e-155 553.1 513 56.7
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 2.2e-155 553.1 513 56.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.9e-155 552.7 426 67.6
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 3.7e-155 552.4 485 59.4
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 8.3e-155 551.2 500 57.4
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 7.0e-154 548.1 513 55.9
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 3.6e-150 535.8 520 55.4
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 8.9e-149 531.2 589 50.8
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.4e-147 525.0 590 51.5
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.4e-146 523.9 515 50.9
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.0e-146 521.5 510 55.1
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.0e-144 515.4 531 53.3
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 6.8e-141 505.0 453 58.3
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.5e-135 487.3 531 49.3
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.1e-130 471.1 513 50.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.1e-121 440.3 468 48.7
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 3.0e-120 436.4 526 45.8
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.6e-118 430.6 376 62.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.6e-113 414.1 389 55.3
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 6.0e-113 412.1 340 61.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 6.4e-107 392.1 525 41.5
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 6.9e-101 372.1 431 52.0
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 4.9e-99 365.9 461 47.5
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 8.4e-99 365.2 528 41.1
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.5e-95 354.4 386 53.4
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 3.1e-93 346.7 415 47.2
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 2.6e-92 343.6 325 55.1
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.2e-84 318.2 456 41.7
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.4e-84 316.6 243 66.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 6.3e-78 295.8 325 51.4
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.0e-75 288.5 341 46.6
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 9.4e-74 282.0 196 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 5.9e-68 262.7 454 35.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 4.8e-62 243.0 374 40.9
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 5.4e-53 213.0 358 37.2
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 2.0e-52 211.1 541 30.3
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.5e-50 203.0 173 57.8
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 6.1e-49 199.5 135 71.1
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.0e-44 184.5 136 64.7
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.9e-44 183.0 132 69.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.9e-44 183.0 132 69.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 2.7e-28 131.0 491 27.5
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.6e-27 125.9 192 38.5
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 5.4e-21 106.7 60 83.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 6.0e-20 103.2 121 43.0
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 6.0e-20 103.2 219 35.2
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.6e-19 99.8 57 78.9
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.6e-17 94.0 52 82.7
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.8e-16 91.7 53 71.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 3.4e-15 87.4 109 43.1
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 3.4e-15 87.4 109 43.1
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.8e-14 84.0 65 64.6
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 7.8e-12 76.3 74 52.7
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 5.3e-08 63.5 75 40.0


User provided reference genes

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