Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00285 Erythranthe guttata HOM05D028916 ORTHO05D019110 5.0e-137 491.1 252 100.0
Migut.J00290 Erythranthe guttata HOM05D028916 ORTHO05D019110 3.7e-55 219.2 277 51.3
Migut.J00289 Erythranthe guttata HOM05D028916 ORTHO05D019110 2.0e-37 160.2 139 66.2
Migut.J00284 Erythranthe guttata HOM05D038591 ORTHO05D019110 8.0e-34 148.3 270 39.3
Migut.J00286 Erythranthe guttata HOM05D028916 ORTHO05D019110 4.5e-29 132.5 175 44.6
Migut.J00291 Erythranthe guttata HOM05D053850 ORTHO05D019110 3.3e-19 99.8 257 33.1
Migut.J00287 Erythranthe guttata HOM05D053850 ORTHO05D189602 2.0e-16 90.5 262 30.5
CANSAT35G1073 Cannabis sativa HOM05D001009 ORTHO05D000829 3.9e-12 76.3 255 27.1
CSS0049537 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 2.5e-11 73.6 255 26.3
TWI77G0127 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 4.3e-11 72.8 257 25.3
Oeu059732.1 Olea europaea HOM05D001009 ORTHO05D000829 2.1e-10 70.5 256 25.4
Hund16053 Selenicereus undatus HOM05D001009 ORTHO05D000829 2.1e-10 70.5 211 26.5
Duzib106G0916 Durio zibethinus HOM05D001009 ORTHO05D000829 8.1e-10 68.6 260 25.4
MBI05_g02642_MAGBIO Magnolia biondii HOM05D001009 ORTHO05D000829 1.1e-09 68.2 259 24.7
TAR636G1456 Trochodendron aralioides HOM05D001009 ORTHO05D000829 3.1e-09 66.6 255 26.3
TAR636G2594 Trochodendron aralioides HOM05D001009 ORTHO05D000829 5.2e-09 65.9 259 25.5
TPR.G38424 Trifolium pratense HOM05D001009 ORTHO05D000829 8.9e-09 65.1 254 26.0
Atru.chr2.339 Acer truncatum HOM05D001009 ORTHO05D000829 1.2e-08 64.7 249 24.1
MSTRG.8284 Avicennia marina HOM05D001009 ORTHO05D000829 1.2e-08 64.7 255 26.7
CSS0002250 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 1.2e-08 64.7 256 23.8
Potri.010G198500 Populus trichocarpa HOM05D001009 ORTHO05D000829 1.2e-08 64.7 258 23.6
CAN.G554.13 Capsicum annuum HOM05D001009 ORTHO05D000829 2.0e-08 63.9 257 24.9
Atru.chr8.2062 Acer truncatum HOM05D001009 ORTHO05D000829 2.6e-08 63.5 249 24.1
BcaB02g08407 Brassica carinata HOM05D001009 ORTHO05D000829 3.4e-08 63.2 234 25.2
Potri.010G198600 Populus trichocarpa HOM05D001009 ORTHO05D000829 7.6e-08 62.0 192 22.4
BcaC02g09772 Brassica carinata HOM05D001009 ORTHO05D000829 9.9e-08 61.6 197 26.9
C04p36760 Brassica napus HOM05D001009 ORTHO05D000829 9.9e-08 61.6 197 26.9
Ah.10g037100 Amaranthus hybridus HOM05D001009 ORTHO05D000829 1.3e-07 61.2 237 25.7
A04p04370 Brassica napus HOM05D001009 ORTHO05D000829 1.3e-07 61.2 195 25.6
BraA04t16147Z Brassica rapa HOM05D001009 ORTHO05D000829 1.7e-07 60.8 195 25.6
TWI63G0148 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 2.2e-07 60.5 252 25.4
BolC4t25121H Brassica oleracea HOM05D001009 ORTHO05D000829 2.9e-07 60.1 196 27.0
CAN.G774.39 Capsicum annuum HOM05D001009 ORTHO05D000829 2.9e-07 60.1 263 22.4
CAN.G774.44 Capsicum annuum HOM05D001009 ORTHO05D000829 2.9e-07 60.1 263 22.4
Lj8A78T47 Lonicera japonica HOM05D001009 ORTHO05D000829 2.9e-07 60.1 168 29.2
Prupe.6G262100 Prunus persica HOM05D001009 ORTHO05D000829 2.9e-07 60.1 265 25.3
Solyc09g011250.3 Solanum lycopersicum HOM05D001009 ORTHO05D000829 2.9e-07 60.1 167 25.7
Sabra10G0152800 Salix brachista HOM05D001009 ORTHO05D000829 3.7e-07 59.7 192 24.0
Sp5g06870 Schrenkiella parvula HOM05D001009 ORTHO05D000829 3.7e-07 59.7 175 27.4
Thecc.10G034700 Theobroma cacao HOM05D001009 ORTHO05D000829 3.7e-07 59.7 261 24.5
TWI15G0684 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 3.7e-07 59.7 252 23.0
Manes.07G120600 Manihot esculenta HOM05D001009 ORTHO05D000829 4.9e-07 59.3 254 22.4
AT3G55605 Arabidopsis thaliana HOM05D001009 ORTHO05D000829 6.4e-07 58.9 171 27.5
Thhalv10010645m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 6.4e-07 58.9 175 27.4
Peaxi162Scf00584g00014 Petunia axillaris HOM05D001009 ORTHO05D000829 6.4e-07 58.9 262 26.7
Sopen09g006000 Solanum pennellii HOM05D001009 ORTHO05D000829 6.4e-07 58.9 251 23.5
Carub.0005s2235 Capsella rubella HOM05D001009 ORTHO05D000829 8.3e-07 58.5 254 23.2
MD00G1141400 Malus domestica HOM05D001009 ORTHO05D000829 8.3e-07 58.5 232 27.2
Cc02_g07350 Coffea canephora HOM05D001009 ORTHO05D000829 1.9e-06 57.4 257 24.5
Gohir.A05G347400 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.9e-06 57.4 261 24.1
Nitab4.5_0000779g0060 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.9e-06 57.4 256 21.9
Nitab4.5_0004474g0020 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.9e-06 57.4 257 23.3
MD12G1150500 Malus domestica HOM05D001009 ORTHO05D000829 2.4e-06 57.0 260 25.0
Ah.16g102680 Amaranthus hybridus HOM05D002357 ORTHO05D002676 3.2e-06 56.6 227 24.7
Os01g0143300 Oryza sativa ssp. japonica HOM05D001009 ORTHO05D000829 9.2e-06 55.1 183 26.8


User provided reference genes

Program Settings