Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00152 Erythranthe guttata HOM05D004149 ORTHO05D005028 2.1e-118 429.1 225 100.0
SGA_v2.0_scaffold75G25021 Striga asiatica HOM05D004149 ORTHO05D005028 1.3e-104 383.3 226 87.6
unitig_578.g15899 Utricularia gibba HOM05D004149 ORTHO05D005028 2.6e-92 342.4 223 77.1
Cc06_g01230 Coffea canephora HOM05D004149 ORTHO05D005028 3.5e-89 332.0 226 76.1
Lsat_1_v5_gn_5_149460 Lactuca sativa HOM05D004149 ORTHO05D005028 1.1e-85 320.5 227 69.2
Nitab4.5_0000261g0010 Nicotiana tabacum HOM05D004149 ORTHO05D005028 6.8e-85 317.8 227 74.9
Lj3A951T30 Lonicera japonica HOM05D004149 ORTHO05D005028 3.4e-84 315.5 243 67.1
CAN.G740.4 Capsicum annuum HOM05D004149 ORTHO05D005028 5.8e-84 314.7 227 70.0
HanXRQChr13g0406611 Helianthus annuus HOM05D004149 ORTHO05D005028 7.5e-84 314.3 227 72.2
GSVIVG01011172001 Vitis vinifera HOM05D004149 ORTHO05D005028 2.2e-83 312.8 225 74.7
QL07p035253 Quercus lobata HOM05D004149 ORTHO05D005028 3.7e-83 312.0 228 67.5
Nitab4.5_0002020g0030 Nicotiana tabacum HOM05D004149 ORTHO05D005028 6.4e-83 311.2 226 73.0
DCAR_018696 Daucus carota HOM05D004149 ORTHO05D005028 1.4e-82 310.1 228 71.5
Hma1.2p1_0479F.1_g161390 Hydrangea macrophylla HOM05D004149 ORTHO05D005028 1.9e-82 309.7 225 72.4
Haze_21017 Corylus avellana HOM05D004149 ORTHO05D005028 7.1e-82 307.8 226 72.6
CSS0009567 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 9.2e-82 307.4 225 72.0
Sopen09g001490 Solanum pennellii HOM05D004149 ORTHO05D005028 9.2e-82 307.4 226 71.7
TAR633G0450 Trochodendron aralioides HOM05D004149 ORTHO05D005028 9.2e-82 307.4 226 71.2
Cfa017194 Carpinus fangiana HOM05D004149 ORTHO05D005028 2.1e-81 306.2 226 72.1
CiPaw.09G210500 Carya illinoinensis HOM05D004149 ORTHO05D005028 7.8e-81 304.3 226 70.8
PGSC0003DMG400004449 Solanum tuberosum HOM05D004149 ORTHO05D005028 1.7e-80 303.1 226 71.2
ECA248G2679 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.0e-80 302.4 224 65.6
Dinv14509 Davidia involucrata HOM05D004149 ORTHO05D005028 5.1e-80 301.6 226 70.4
Nn2g10866 Nelumbo nucifera HOM05D004149 ORTHO05D005028 6.6e-80 301.2 225 65.3
Actinidia11575 Actinidia chinensis HOM05D004149 ORTHO05D005028 1.1e-79 300.4 230 70.4
Potri.016G117600 Populus trichocarpa HOM05D004149 ORTHO05D005028 2.5e-79 299.3 224 67.0
MELO3C009158.2 Cucumis melo HOM05D004149 ORTHO05D005028 9.5e-79 297.4 225 65.3
CsaV3_3G033680 Cucumis sativus L. HOM05D004149 ORTHO05D005028 9.5e-79 297.4 225 65.3
ClCG10G022210 Citrullus lanatus HOM05D004149 ORTHO05D005028 4.7e-78 295.0 236 62.7
Sabra16G0113700 Salix brachista HOM05D004149 ORTHO05D005028 8.1e-78 294.3 227 65.6
CARHR272500 Cardamine hirsuta HOM05D004149 ORTHO05D005028 1.4e-77 293.5 226 62.4
Lalb_Chr07g0193651 Lupinus albus HOM05D004149 ORTHO05D005028 2.3e-77 292.7 228 66.7
Phvul.010G076100 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 3.1e-77 292.4 230 66.5
Sed0021100 Sechium edule HOM05D004149 ORTHO05D005028 3.1e-77 292.4 225 66.2
EL10Ac5g12549 Beta vulgaris HOM05D004149 ORTHO05D005028 6.8e-77 291.2 222 67.1
AT5G58640 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 8.9e-77 290.8 227 65.6
A10p15620 Brassica napus HOM05D004149 ORTHO05D005028 1.5e-76 290.0 231 61.5
BraA10t43671Z Brassica rapa HOM05D004149 ORTHO05D005028 1.5e-76 290.0 231 61.5
Carub.0008s1926 Capsella rubella HOM05D004149 ORTHO05D005028 1.5e-76 290.0 231 61.0
Ciclev10029239m.g Citrus clementina HOM05D004149 ORTHO05D005028 2.0e-76 289.7 224 68.8
AT3G47300 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 2.6e-76 289.3 225 63.1
Eucgr.B02246 Eucalyptus grandis HOM05D004149 ORTHO05D005028 2.6e-76 289.3 227 68.3
Rhsim05G0216800 Rhododendron simsii HOM05D004149 ORTHO05D005028 2.6e-76 289.3 233 68.7
C03p14190 Brassica napus HOM05D004149 ORTHO05D005028 3.4e-76 288.9 226 61.9
Duzib168G0285 Durio zibethinus HOM05D004149 ORTHO05D005028 3.4e-76 288.9 225 68.4
Prupe.6G279000 Prunus persica HOM05D004149 ORTHO05D005028 3.4e-76 288.9 230 62.2
Sp6g20340 Schrenkiella parvula HOM05D004149 ORTHO05D005028 3.4e-76 288.9 233 59.7
BcaB01g04503 Brassica carinata HOM05D004149 ORTHO05D005028 4.4e-76 288.5 226 62.4
arahy.Tifrunner.gnm1.ann1.CPEN6V Arachis hypogaea HOM05D004149 ORTHO05D005028 7.6e-76 287.7 231 69.3
arahy.Tifrunner.gnm1.ann1.JHY1NE Arachis hypogaea HOM05D004149 ORTHO05D005028 7.6e-76 287.7 229 69.9
Thhalv10010643m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 7.6e-76 287.7 228 64.0
A03p12090 Brassica napus HOM05D004149 ORTHO05D005028 9.9e-76 287.3 226 62.8
BolC3t13864H Brassica oleracea HOM05D004149 ORTHO05D005028 9.9e-76 287.3 238 58.0
BraA03t10521Z Brassica rapa HOM05D004149 ORTHO05D005028 9.9e-76 287.3 226 62.8
C09p50720 Brassica napus HOM05D004149 ORTHO05D005028 1.3e-75 287.0 233 59.7
Glyma.03G056500 Glycine max HOM05D004149 ORTHO05D005028 1.3e-75 287.0 230 66.1
AL8G34910 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 4.9e-75 285.0 226 65.0
VMungo0331G2046 Vigna mungo HOM05D004149 ORTHO05D005028 6.4e-75 284.6 228 65.8
TPR.G34577 Trifolium pratense HOM05D004149 ORTHO05D005028 8.4e-75 284.3 227 67.0
Potri.009G047000 Populus trichocarpa HOM05D004149 ORTHO05D005028 1.9e-74 283.1 224 67.9
Sc22g0002520 Simmondsia chinensis HOM05D004149 ORTHO05D005028 1.9e-74 283.1 226 67.3
Thecc.09G299600 Theobroma cacao HOM05D004149 ORTHO05D005028 3.2e-74 282.3 225 69.8
Ca_20283_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 5.4e-74 281.6 228 71.1
Manes.01G160400 Manihot esculenta HOM05D004149 ORTHO05D005028 7.1e-74 281.2 226 67.7
Aqoxy4G02534 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 1.2e-73 280.4 228 64.9
BolC9t57922H Brassica oleracea HOM05D004149 ORTHO05D005028 1.2e-73 280.4 239 58.2
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 1.2e-73 280.4 222 67.6
Thhalv10014590m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 3.5e-73 278.9 233 58.8
arahy.Tifrunner.gnm1.ann1.43A4DE Arachis hypogaea HOM05D004149 ORTHO05D005028 4.6e-73 278.5 225 68.0
Lj3g0002740 Lotus japonicus HOM05D004149 ORTHO05D005028 6.0e-73 278.1 222 69.4
Gohir.D09G089700 Gossypium hirsutum HOM05D004149 ORTHO05D005028 7.8e-73 277.7 224 66.1
Gorai.006G105900 Gossypium raimondii HOM05D004149 ORTHO05D005028 7.8e-73 277.7 224 66.1
Gohir.A09G089600 Gossypium hirsutum HOM05D004149 ORTHO05D005028 1.0e-72 277.3 223 66.8
PSO339G1238 Papaver somniferum HOM05D004149 ORTHO05D005028 1.3e-72 276.9 225 61.8
PSO384G4313 Papaver somniferum HOM05D004149 ORTHO05D005028 1.7e-72 276.6 225 61.8
Lj2C73G10 Lonicera japonica HOM05D004149 ORTHO05D005028 3.0e-72 275.8 276 53.6
Ah.12g058720 Amaranthus hybridus HOM05D004149 ORTHO05D005028 5.1e-72 275.0 222 64.9
Medtr5g071240 Medicago truncatula HOM05D004149 ORTHO05D005028 5.1e-72 275.0 222 66.2
Psat2g057600 Pisum sativum HOM05D004149 ORTHO05D005028 6.6e-72 274.6 227 64.8
TWI31G0142 Tripterygium wilfordii HOM05D004149 ORTHO05D005028 8.6e-72 274.2 225 65.8
PGR102G2658 Punica granatum HOM05D004149 ORTHO05D005028 1.1e-71 273.9 228 66.2
Potri.001G253000 Populus trichocarpa HOM05D004149 ORTHO05D005028 1.5e-71 273.5 230 65.7
TPR.G13346 Trifolium pratense HOM05D004149 ORTHO05D005028 1.5e-71 273.5 228 68.0
Aa31LG4G16110 Aethionema arabicum HOM05D004149 ORTHO05D005028 1.9e-71 273.1 255 55.3
LjContig00155g0022980 Lotus japonicus HOM05D004149 ORTHO05D005028 3.3e-71 272.3 225 64.0
QL01p038648 Quercus lobata HOM05D004149 ORTHO05D005028 7.3e-71 271.2 227 64.8
Haze_24342 Corylus avellana HOM05D004149 ORTHO05D005028 9.6e-71 270.8 226 63.3
arahy.Tifrunner.gnm1.ann1.AG3942 Arachis hypogaea HOM05D004149 ORTHO05D005028 1.2e-70 270.4 226 66.4
Glyma.14G194500 Glycine max HOM05D004149 ORTHO05D005028 1.2e-70 270.4 244 61.5
RcHm_v2.0_Chr3g0462841 Rosa chinensis HOM05D004149 ORTHO05D005028 1.2e-70 270.4 225 63.1
AL5G26480 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 2.1e-70 269.6 225 62.2
MD03G1067200 Malus domestica HOM05D004149 ORTHO05D005028 2.1e-70 269.6 225 63.1
Psat7g245760 Pisum sativum HOM05D004149 ORTHO05D005028 2.1e-70 269.6 228 68.0
Glyma.02G227600 Glycine max HOM05D004149 ORTHO05D005028 3.6e-70 268.9 233 64.4
VMungo0647G1724 Vigna mungo HOM05D004149 ORTHO05D005028 4.7e-70 268.5 246 60.2
Lalb_Chr04g0252201 Lupinus albus HOM05D004149 ORTHO05D005028 1.8e-69 266.5 221 66.1
Hund14286 Selenicereus undatus HOM05D004149 ORTHO05D005028 1.8e-69 266.5 227 63.4
Lalb_Chr10g0103381 Lupinus albus HOM05D004149 ORTHO05D005028 2.4e-69 266.2 226 65.0
Medtr4g015610 Medicago truncatula HOM05D004149 ORTHO05D005028 3.1e-69 265.8 229 68.6
MD12G1168700 Malus domestica HOM05D004149 ORTHO05D005028 6.8e-69 264.6 219 58.4
Manes.09G107600 Manihot esculenta HOM05D004149 ORTHO05D005028 2.0e-68 263.1 209 65.6
FvH4_6g11300 Fragaria vesca HOM05D004149 ORTHO05D005028 7.6e-68 261.2 230 59.6
FAN14G0231 Fragaria x ananassa HOM05D004149 ORTHO05D005028 7.6e-68 261.2 230 59.6
FAN14G3883 Fragaria x ananassa HOM05D004149 ORTHO05D005028 7.6e-68 261.2 230 59.6
ATR0681G135 Amborella trichopoda HOM05D004149 ORTHO05D005028 9.9e-68 260.8 227 61.2
Cpa.g.sc112.1 Carica papaya HOM05D004149 ORTHO05D005028 1.3e-67 260.4 172 73.3
Sp5g14550 Schrenkiella parvula HOM05D004149 ORTHO05D005028 2.9e-67 259.2 225 60.9
FAN16G0525 Fragaria x ananassa HOM05D004149 ORTHO05D005028 3.8e-67 258.8 222 61.3
FAN05G2859 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.9e-67 258.5 230 58.7
Phvul.008G260400 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 4.9e-67 258.5 248 56.9
Prupe.6G055700 Prunus persica HOM05D004149 ORTHO05D005028 6.4e-67 258.1 226 62.8
MD11G1071900 Malus domestica HOM05D004149 ORTHO05D005028 8.4e-67 257.7 229 61.6
Sabra09G0034400 Salix brachista HOM05D004149 ORTHO05D005028 1.9e-66 256.5 269 56.1
FvH4_3g38810 Fragaria vesca HOM05D004149 ORTHO05D005028 2.4e-66 256.1 222 60.4
FAN25G1984 Fragaria x ananassa HOM05D004149 ORTHO05D005028 2.4e-66 256.1 222 59.5
Zm00001eb368380 Zea mays HOM05D004149 ORTHO05D005028 1.2e-65 253.8 223 57.0
FAN09G2001 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.6e-65 253.4 230 59.1
CDE03G0191 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 2.1e-65 253.1 217 60.8
Atru.chr3.4194 Acer truncatum HOM05D004149 ORTHO05D005028 4.6e-65 251.9 157 73.9
Peaxi162Scf00170g00124 Petunia axillaris HOM05D004149 ORTHO05D005028 6.6e-64 248.1 138 84.1
RcHm_v2.0_Chr5g0070001 Rosa chinensis HOM05D004149 ORTHO05D005028 6.6e-64 248.1 222 59.5
CDE04G2602 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 1.5e-63 246.9 220 55.5
HPP92_017934 Vanilla planifolia HOM05D004149 ORTHO05D005028 1.5e-63 246.9 236 58.1
BcaC04g19825 Brassica carinata HOM05D004149 ORTHO05D005028 7.3e-63 244.6 190 61.6
Os01g0832200 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 2.8e-62 242.7 225 54.7
SEGI_37457 Sequoiadendron giganteum HOM05D004149 ORTHO05D005028 8.1e-62 241.1 218 58.3
Zm00001eb351750 Zea mays HOM05D004149 ORTHO05D005028 1.1e-61 240.7 245 51.4
Cfa011711 Carpinus fangiana HOM05D004149 ORTHO05D005028 2.6e-60 236.1 162 66.7
CANSAT54G2318 Cannabis sativa HOM05D004149 ORTHO05D005028 3.4e-60 235.7 254 53.5
Os05g0467300 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 3.4e-60 235.7 249 55.0
SHI31752 Sapria himalayana HOM05D004149 ORTHO05D005028 3.5e-57 225.7 244 52.5
Dinv14507 Davidia involucrata HOM05D011585 ORTHO05D005028 7.9e-57 224.6 147 71.4
CiPaw.14G058300 Carya illinoinensis HOM05D004149 ORTHO05D005028 1.3e-56 223.8 193 63.2
AUR62030494 Chenopodium quinoa HOM05D004149 ORTHO05D005028 1.2e-52 210.7 139 69.1
AUR62030801 Chenopodium quinoa HOM05D004149 ORTHO05D005028 2.0e-52 209.9 228 51.3
Dinv03100 Davidia involucrata HOM05D004149 ORTHO05D005028 4.5e-52 208.8 132 72.0
Actinidia29092 Actinidia chinensis HOM05D004149 ORTHO05D005028 1.7e-51 206.8 178 60.7
MBI15_g14842_MAGBIO Magnolia biondii HOM05D004149 ORTHO05D005028 1.4e-50 203.8 135 66.7
FAN11G2604 Fragaria x ananassa HOM05D004149 ORTHO05D005028 5.5e-50 201.8 266 44.0
Ca_05615_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 1.6e-49 200.3 131 71.0
CSS0016200 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 2.5e-47 193.0 128 73.4
Psat7g245800 Pisum sativum HOM05D004149 ORTHO05D005028 2.1e-46 189.9 127 72.4
FAN21G1905 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.5e-44 183.7 130 65.4
Carub.0005s1339 Capsella rubella HOM05D004149 ORTHO05D005028 2.6e-44 183.0 132 65.9
Ciclev10013383m.g Citrus clementina HOM05D004149 ORTHO05D005028 1.3e-43 180.6 143 58.7
SMO358G0328 Selaginella moellendorffii HOM05D004149 ORTHO05D005028 7.9e-41 171.4 144 54.2
Solyc09g005590.3 Solanum lycopersicum HOM05D004149 ORTHO05D005028 7.6e-36 154.8 90 77.8
vmacro20289 Vaccinium macrocarpon HOM05D004149 ORTHO05D005028 3.2e-34 149.4 131 60.3
FAN02G4186 Fragaria x ananassa HOM05D004149 ORTHO05D005028 2.3e-32 143.3 238 42.0
Atru.chr8.2258 Acer truncatum HOM05D004149 ORTHO05D005028 2.5e-31 139.8 91 67.0
MSTRG.19005 Avicennia marina HOM05D004149 ORTHO05D005028 2.2e-27 126.7 85 84.7
MD03G1067500 Malus domestica HOM05D004149 ORTHO05D005028 4.6e-25 119.0 89 65.2
MD04G1155500 Malus domestica HOM05D004149 ORTHO05D005028 7.9e-25 118.2 122 50.8
Sed0020125 Sechium edule HOM05D004149 ORTHO05D005028 1.1e-23 114.4 227 31.7
Aqoxy2G00865 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 1.3e-22 110.9 180 40.0
Solyc09g005580.4 Solanum lycopersicum HOM05D004149 ORTHO05D005028 1.2e-20 104.4 102 66.7
Cre14.g616950 Chlamydomonas reinhardtii HOM05D004149 ORTHO05D005028 1.6e-17 94.0 123 35.8
C07p23840 Brassica napus HOM05D004149 ORTHO05D005028 3.6e-17 92.8 79 57.0
PRCOL_00001680 Prasinoderma coloniale HOM05D004149 ORTHO05D005028 1.8e-16 90.5 117 38.5
MCO12G475 Micromonas commoda HOM05D004149 ORTHO05D005028 1.1e-15 87.8 135 34.1
GSVIVG01032328001 Vitis vinifera HOM05D004149 ORTHO05D005028 8.2e-14 81.6 95 61.1
GSVIVG01030787001 Vitis vinifera HOM05D004149 ORTHO05D005028 9.1e-13 78.2 98 58.2
CBR_g34707 Chara braunii HOM05D004149 ORTHO05D005028 1.6e-12 77.4 117 35.0
GSVIVG01000345001 Vitis vinifera HOM05D000200 ORTHO05D011629 2.0e-12 77.0 87 64.4
BcaB01g01543 Brassica carinata HOM05D004149 ORTHO05D039425 5.9e-12 75.5 80 48.8
BcaC02g09351 Brassica carinata HOM05D004149 ORTHO05D094654 2.5e-10 70.1 73 49.3
BcaB06g29604 Brassica carinata HOM05D004149 ORTHO05D039425 3.7e-06 56.2 56 46.4


User provided reference genes

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