Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 4.5e-193 677.9 392 100.0
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 3.0e-112 409.5 313 68.7
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 8.7e-112 407.9 309 69.9
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 7.9e-105 384.8 310 68.1
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 7.4e-103 378.3 311 65.3
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 2.2e-102 376.7 305 65.9
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 4.1e-101 372.5 305 64.9
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.0e-100 370.2 305 63.9
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 2.6e-100 369.8 305 63.9
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 2.6e-100 369.8 306 65.0
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 4.5e-100 369.0 308 62.7
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 4.5e-100 369.0 311 64.6
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 1.7e-99 367.1 306 64.4
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 2.2e-99 366.7 306 64.4
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 2.2e-99 366.7 305 63.6
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 2.2e-99 366.7 313 63.6
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 2.9e-99 366.3 305 64.3
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.0e-99 365.5 305 63.0
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.9e-98 363.6 311 64.0
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.5e-98 363.2 325 60.9
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 3.2e-98 362.8 306 64.7
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 7.2e-98 361.7 313 62.9
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 7.2e-98 361.7 310 62.3
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 9.4e-98 361.3 312 62.8
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 9.4e-98 361.3 311 64.0
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 9.4e-98 361.3 311 61.7
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 1.2e-97 360.9 310 62.3
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 2.1e-97 360.1 322 59.9
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 2.7e-97 359.8 312 61.9
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 4.6e-97 359.0 311 62.7
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 7.9e-97 358.2 311 61.4
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 8.8e-96 354.8 306 60.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 2.0e-95 353.6 307 61.6
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 2.0e-95 353.6 315 62.5
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 2.0e-95 353.6 306 62.7
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 5.7e-95 352.1 308 62.7
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 5.7e-95 352.1 308 63.0
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 9.7e-95 351.3 308 60.7
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 1.3e-94 350.9 305 60.3
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 2.2e-94 350.1 310 61.9
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 4.8e-94 349.0 319 59.6
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.2e-94 348.2 308 60.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 4.1e-93 345.9 313 59.1
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 2.0e-92 343.6 312 60.6
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 2.6e-92 343.2 312 60.3
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 3.4e-92 342.8 307 59.6
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.3e-91 340.9 316 58.5
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.7e-91 340.5 311 59.2
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 2.2e-91 340.1 305 58.0
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 2.2e-91 340.1 312 59.0
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 2.9e-91 339.7 319 58.0
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 2.9e-91 339.7 310 60.0
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 5.0e-91 339.0 308 58.1
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 5.0e-91 339.0 310 59.7
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 5.0e-91 339.0 305 59.7
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 5.5e-90 335.5 313 59.7
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 9.4e-90 334.7 286 63.3
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.2e-89 334.3 310 58.7
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 4.7e-89 332.4 312 57.4
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 1.0e-88 331.3 331 57.1
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.8e-88 330.5 306 57.5
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 1.8e-88 330.5 325 54.5
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 1.8e-88 330.5 322 57.5
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 1.3e-86 324.3 339 55.8
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.7e-86 323.9 312 54.8
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 8.2e-86 321.6 263 66.2
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 1.2e-84 317.8 329 54.7
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 3.8e-83 312.8 311 56.6
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 5.0e-83 312.4 302 57.6
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.5e-82 310.8 310 56.5
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 5.5e-82 308.9 310 55.5
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 4.4e-79 299.3 315 52.4
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 1.3e-78 297.7 315 56.5
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 2.0e-76 290.4 311 53.4
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 5.0e-75 285.8 422 44.1
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 2.7e-73 280.0 234 65.0
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 9.8e-71 271.6 239 61.1
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 2.5e-66 256.9 306 48.4
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 5.5e-66 255.8 234 59.0
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 3.6e-65 253.1 204 65.7
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 2.6e-63 246.9 182 70.9
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 9.2e-61 238.4 182 66.5
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 9.2e-61 238.4 260 53.1
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 5.0e-59 232.6 198 60.1
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 5.6e-58 229.2 312 46.8
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 1.6e-57 227.6 318 46.5
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.0e-56 224.9 326 41.4
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 1.7e-54 217.6 314 44.6
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.3e-51 208.0 282 46.5
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 8.9e-48 195.3 320 39.7
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 7.5e-47 192.2 342 37.7
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 7.5e-47 192.2 181 58.6
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 3.7e-46 189.9 222 50.0
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 8.6e-35 152.1 130 63.1
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 3.1e-32 143.7 125 61.6
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 1.2e-31 141.7 117 67.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 1.3e-27 128.3 101 62.4
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 1.3e-27 128.3 323 30.3
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 7.3e-26 122.5 102 62.7
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 5.2e-24 116.3 87 64.4
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 5.2e-24 116.3 108 64.8
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 3.3e-18 97.1 88 60.2
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 2.8e-17 94.0 101 48.5
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 3.1e-16 90.5 356 25.8
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 2.1e-12 77.8 267 28.5
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 9.9e-07 58.9 110 31.8


User provided reference genes

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