Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 6.0e-115 417.9 277 100.0
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 3.9e-50 202.6 146 67.8
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 1.5e-49 200.7 156 66.0
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 7.4e-49 198.4 124 72.6
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 6.3e-48 195.3 160 63.8
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 8.2e-48 194.9 160 62.5
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 8.2e-48 194.9 146 63.7
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 1.1e-47 194.5 166 60.2
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.4e-47 194.1 157 63.7
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.4e-47 194.1 161 61.5
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 1.4e-47 194.1 161 60.9
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.4e-47 194.1 161 61.5
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.4e-47 194.1 161 61.5
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 2.4e-47 193.4 170 58.2
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 4.1e-47 192.6 131 71.8
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 6.9e-47 191.8 158 60.1
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.2e-46 191.0 161 60.2
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 1.2e-46 191.0 159 57.9
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 1.2e-46 191.0 127 69.3
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 1.5e-46 190.7 133 70.7
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.5e-46 190.7 151 64.2
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 2.6e-46 189.9 120 71.7
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 4.5e-46 189.1 128 71.9
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 4.5e-46 189.1 150 63.3
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 5.9e-46 188.7 129 70.5
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 1.0e-45 188.0 154 60.4
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.3e-45 187.6 152 60.5
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 1.3e-45 187.6 121 69.4
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 1.7e-45 187.2 153 64.1
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.7e-45 187.2 156 59.0
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 2.9e-45 186.4 166 56.0
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 2.9e-45 186.4 164 57.9
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 5.0e-45 185.7 124 71.0
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 6.5e-45 185.3 133 68.4
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 8.5e-45 184.9 140 62.1
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 1.1e-44 184.5 120 71.7
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 1.1e-44 184.5 120 71.7
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.4e-44 184.1 157 58.6
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.9e-44 183.7 159 57.9
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 2.5e-44 183.3 235 45.1
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.5e-44 183.3 120 70.8
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 4.2e-44 182.6 147 60.5
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 5.5e-44 182.2 162 60.5
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 7.2e-44 181.8 156 59.0
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 9.4e-44 181.4 147 60.5
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 9.4e-44 181.4 128 65.6
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 9.4e-44 181.4 128 65.6
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.1e-43 180.3 121 71.1
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 3.6e-43 179.5 136 61.8
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 3.6e-43 179.5 128 64.8
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 3.6e-43 179.5 123 68.3
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 3.6e-43 179.5 130 65.4
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 4.7e-43 179.1 148 58.8
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 4.7e-43 179.1 155 56.8
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 4.7e-43 179.1 160 57.5
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 7.9e-43 178.3 148 59.5
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.0e-42 177.9 138 63.0
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.4e-42 177.6 140 64.3
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 1.8e-42 177.2 126 69.8
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 2.3e-42 176.8 121 71.1
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 8.8e-42 174.9 155 57.4
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 8.8e-42 174.9 146 61.6
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.1e-41 174.5 132 61.4
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 5.7e-41 172.2 129 62.8
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 9.7e-41 171.4 148 60.8
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.3e-40 171.0 116 68.1
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 1.3e-40 171.0 108 75.9
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 2.8e-40 169.9 117 71.8
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-40 169.9 117 71.8
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-39 167.9 117 70.1
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.8e-39 167.2 117 70.9
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 1.8e-39 167.2 110 71.8
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 4.1e-39 166.0 120 66.7
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 5.3e-39 165.6 122 65.6
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.2e-38 164.5 129 62.0
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 2.2e-37 160.2 107 72.0
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 8.5e-37 158.3 125 60.8
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 3.2e-36 156.4 118 62.7
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 9.4e-36 154.8 132 59.8
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 9.4e-36 154.8 106 72.6
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 4.0e-34 149.4 137 54.7
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 3.3e-33 146.4 106 68.9
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.1e-31 141.4 118 56.8
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.0e-29 134.8 131 50.4
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 1.1e-28 131.3 157 42.7
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.5e-28 131.0 129 48.1
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 2.1e-27 127.1 144 47.9
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 5.2e-26 122.5 122 52.5
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 5.2e-26 122.5 99 58.6
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 2.2e-24 117.1 109 53.2
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 6.3e-24 115.5 122 46.7
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.3e-24 115.2 92 66.3
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 1.8e-23 114.0 137 45.3
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 2.2e-21 107.1 122 50.0
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.0e-09 67.4 44 72.7
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 5.7e-09 65.9 44 70.5
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 9.8e-09 65.1 35 77.1
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.8e-07 60.8 56 57.1
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 9.2e-07 58.5 49 55.1
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.6e-06 57.8 55 58.2


User provided reference genes

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