Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01195 Erythranthe guttata HOM05D007552 ORTHO05D009397 6.6e-221 771.2 656 100.0
MSTRG.22501 Avicennia marina HOM05D007552 ORTHO05D009397 1.0e-112 411.8 666 67.4
SalBow3G0468 Salvia bowleyana HOM05D007552 ORTHO05D009397 7.3e-103 379.0 659 61.2
Cc02_g21230 Coffea canephora HOM05D007552 ORTHO05D009397 9.2e-82 308.9 444 66.7
Sopen01g032250 Solanum pennellii HOM05D007552 ORTHO05D009397 4.4e-76 290.0 418 57.4
Solyc01g080450.4 Solanum lycopersicum HOM05D007552 ORTHO05D009397 1.2e-73 282.0 373 61.1
CSS0020938 Camellia sinensis var. sinensis HOM05D007552 ORTHO05D009397 1.3e-72 278.5 438 58.2
Hma1.2p1_0517F.1_g170780 Hydrangea macrophylla HOM05D007552 ORTHO05D009397 5.1e-72 276.6 436 56.7
Dinv11901 Davidia involucrata HOM05D007552 ORTHO05D009397 5.6e-71 273.1 643 58.3
SalBow3G2744 Salvia bowleyana HOM05D007552 ORTHO05D009397 3.1e-69 267.3 559 61.9
PGSC0003DMG400032099 Solanum tuberosum HOM05D007552 ORTHO05D009397 1.6e-65 255.0 415 58.3
QL93p2016_0066 Quercus lobata HOM05D007552 ORTHO05D009397 4.6e-65 253.4 441 62.6
Actinidia38807 Actinidia chinensis HOM05D007552 ORTHO05D009397 1.3e-64 251.9 427 61.6
Lj5P680T20 Lonicera japonica HOM05D007552 ORTHO05D009397 1.7e-64 251.5 394 62.4
Actinidia35910 Actinidia chinensis HOM05D007552 ORTHO05D009397 3.0e-64 250.8 436 60.6
CAN.G889.11 Capsicum annuum HOM05D007552 ORTHO05D009397 3.0e-64 250.8 403 58.3
QL08p045079 Quercus lobata HOM05D007552 ORTHO05D009397 5.1e-64 250.0 441 62.1
Nitab4.5_0000059g0200 Nicotiana tabacum HOM05D007552 ORTHO05D009397 6.6e-64 249.6 378 61.6
Manes.13G083600 Manihot esculenta HOM05D007552 ORTHO05D009397 1.1e-63 248.8 437 62.7
Gorai.012G013300 Gossypium raimondii HOM05D007552 ORTHO05D009397 4.3e-63 246.9 435 54.9
Gohir.D04G011100 Gossypium hirsutum HOM05D007552 ORTHO05D009397 9.6e-63 245.7 435 54.5
Duzib128G1161 Durio zibethinus HOM05D007552 ORTHO05D009397 1.6e-62 245.0 441 55.1
Thecc.10G186400 Theobroma cacao HOM05D007552 ORTHO05D009397 1.6e-62 245.0 441 55.1
TAR626G0934 Trochodendron aralioides HOM05D007552 ORTHO05D009397 1.6e-62 245.0 378 59.8
Haze_13567 Corylus avellana HOM05D007552 ORTHO05D009397 4.8e-62 243.4 411 64.7
QL07p010391 Quercus lobata HOM05D007552 ORTHO05D009397 6.2e-62 243.0 445 61.1
Rhsim08G0249900 Rhododendron simsii HOM05D007552 ORTHO05D009397 1.4e-61 241.9 426 60.3
Gohir.A05G404600 Gossypium hirsutum HOM05D007552 ORTHO05D009397 2.4e-61 241.1 435 45.7
Nitab4.5_0007324g0010 Nicotiana tabacum HOM05D007552 ORTHO05D009397 4.0e-61 240.4 378 59.8
Duzib114G0042 Durio zibethinus HOM05D007552 ORTHO05D009397 5.3e-61 240.0 398 57.5
GSVIVG01029542001 Vitis vinifera HOM05D007552 ORTHO05D009397 2.0e-60 238.0 435 56.1
COL.COLO4_19487 Corchorus olitorius HOM05D007552 ORTHO05D009397 7.6e-60 236.1 436 53.4
Prupe.3G022400 Prunus persica HOM05D007552 ORTHO05D009397 1.3e-59 235.3 435 60.5
Sed0018321 Sechium edule HOM05D007552 ORTHO05D009397 2.9e-59 234.2 435 60.7
Sc01g0005200 Simmondsia chinensis HOM05D007552 ORTHO05D009397 3.2e-58 230.7 436 58.9
Oeu058208.1 Olea europaea HOM05D007552 ORTHO05D009397 5.4e-58 229.9 337 72.4
CANSAT54G1473 Cannabis sativa HOM05D007552 ORTHO05D009397 7.1e-58 229.6 437 59.3
MD09G1165000 Malus domestica HOM05D007552 ORTHO05D009397 1.3e-56 225.3 408 62.3
MD17G1163100 Malus domestica HOM05D007552 ORTHO05D009397 4.0e-53 213.8 235 46.0
QL08p045116 Quercus lobata HOM05D007552 ORTHO05D009397 1.5e-52 211.8 374 65.0
vmacro06800 Vaccinium macrocarpon HOM05D007552 ORTHO05D009397 2.0e-52 211.5 423 60.5
Sed0019272 Sechium edule HOM05D007552 ORTHO05D009397 5.8e-52 209.9 435 59.1
Eucgr.F04004 Eucalyptus grandis HOM05D007552 ORTHO05D009397 2.2e-51 208.0 235 47.2
PGR102G1581 Punica granatum HOM05D007552 ORTHO05D009397 8.4e-51 206.1 244 44.7
MELO3C002831.2 Cucumis melo HOM05D007552 ORTHO05D009397 3.2e-50 204.1 235 47.2
CsaV3_1G037150 Cucumis sativus L. HOM05D007552 ORTHO05D009397 3.2e-50 204.1 181 55.8
THA.LOC104812327 Tarenaya hassleriana HOM05D007552 ORTHO05D009397 5.1e-48 196.8 375 63.7
TWI75G0828 Tripterygium wilfordii HOM05D007552 ORTHO05D009397 6.7e-48 196.4 376 64.9
Hund18597 Selenicereus undatus HOM05D007552 ORTHO05D009397 1.9e-47 194.9 270 38.5
Nitab4.5_0007324g0040 Nicotiana tabacum HOM05D007552 ORTHO05D009397 3.3e-47 194.1 378 59.0
Nn1g09670 Nelumbo nucifera HOM05D007552 ORTHO05D009397 7.4e-47 193.0 235 43.4
Lalb_Chr03g0029771 Lupinus albus HOM05D007552 ORTHO05D009397 2.1e-46 191.4 395 61.5
MBI04_g20974_MAGBIO Magnolia biondii HOM05D007552 ORTHO05D009397 1.8e-45 188.3 209 45.5
Peaxi162Scf00095g00416 Petunia axillaris HOM05D007552 ORTHO05D009397 6.9e-45 186.4 560 58.6
Aa31LG7G1270 Aethionema arabicum HOM05D007552 ORTHO05D009397 9.3e-42 176.0 252 37.7
AL1G29000 Arabidopsis lyrata HOM05D007552 ORTHO05D009397 3.9e-40 170.6 192 43.2
HPP92_024564 Vanilla planifolia HOM05D007552 ORTHO05D009397 1.1e-39 169.1 181 43.1
Zm00001eb025110 Zea mays HOM05D007552 ORTHO05D009397 4.3e-39 167.2 208 39.9
ATR0776G035 Amborella trichopoda HOM05D007552 ORTHO05D009397 1.3e-38 165.6 178 43.3
Carub.0001s1657 Capsella rubella HOM05D007552 ORTHO05D009397 2.2e-38 164.9 198 42.4
AT1G16830 Arabidopsis thaliana HOM05D007552 ORTHO05D009397 1.1e-37 162.5 379 49.6
CARHR017300 Cardamine hirsuta HOM05D007552 ORTHO05D009397 1.8e-37 161.8 179 43.6
Os10g0578500 Oryza sativa ssp. japonica HOM05D007552 ORTHO05D009397 1.7e-35 155.2 193 37.3
VMungo1080G1651 Vigna mungo HOM05D007552 ORTHO05D009397 7.2e-34 149.8 386 46.9
CAN.G497.96 Capsicum annuum HOM05D007552 ORTHO05D009397 1.2e-33 149.1 290 36.6
Phvul.005G185300 Phaseolus vulgaris HOM05D007552 ORTHO05D009397 1.0e-32 146.0 387 54.3
Thhalv10007086m.g Eutrema salsugineum HOM05D007552 ORTHO05D009397 1.8e-32 145.2 230 35.7
Lj5g0015623 Lotus japonicus HOM05D007552 ORTHO05D009397 8.8e-32 142.9 366 48.4
TAR626G0440 Trochodendron aralioides HOM05D007552 ORTHO05D009397 1.5e-31 142.1 156 46.2
Glyma.17G219900 Glycine max HOM05D007552 ORTHO05D009397 2.5e-31 141.4 382 53.7
Glyma.19G019400 Glycine max HOM05D007552 ORTHO05D009397 5.7e-31 140.2 382 49.5
Ciclev10033582m.g Citrus clementina HOM05D007552 ORTHO05D009397 1.4e-29 135.6 290 60.3
Ciclev10033432m.g Citrus clementina HOM05D007552 ORTHO05D009397 2.4e-29 134.8 290 60.3
BcaC05g25539 Brassica carinata HOM05D007552 ORTHO05D009397 3.1e-29 134.4 233 35.6
BolC5t30220H Brassica oleracea HOM05D007552 ORTHO05D009397 3.1e-29 134.4 233 35.6
C05p15050 Brassica napus HOM05D007552 ORTHO05D009397 1.0e-27 129.4 234 34.2
A06p12740 Brassica napus HOM05D007552 ORTHO05D009397 1.3e-27 129.0 232 34.1
Sp1g14970 Schrenkiella parvula HOM05D007552 ORTHO05D009397 1.7e-27 128.6 230 32.2
BraA06t24434Z Brassica rapa HOM05D007552 ORTHO05D009397 1.4e-26 125.6 233 33.5
TAR362G0754 Trochodendron aralioides HOM05D007552 ORTHO05D009397 6.7e-24 116.7 112 51.8
BcaB02g06673 Brassica carinata HOM05D007552 ORTHO05D009397 1.7e-22 112.1 217 31.8
Psat3g178720 Pisum sativum HOM05D007552 ORTHO05D009397 1.1e-18 99.4 204 33.8
CSS0021108 Camellia sinensis var. sinensis HOM05D007552 ORTHO05D009397 1.7e-14 85.5 63 61.9
Cpa.g.sc155.17 Carica papaya HOM05D007552 ORTHO05D009397 1.7e-14 85.5 62 61.3
Actinidia21884 Actinidia chinensis HOM05D007552 ORTHO05D009397 2.8e-14 84.7 56 66.1
TPR.G37558 Trifolium pratense HOM05D007552 ORTHO05D009397 2.8e-14 84.7 148 34.5
Medtr7g025610 Medicago truncatula HOM05D007552 ORTHO05D009397 9.1e-13 79.7 177 30.5
MD17G1163200 Malus domestica HOM05D007552 ORTHO05D009397 5.0e-11 73.9 61 50.8
Sc09g0002270 Simmondsia chinensis HOM05D007173 ORTHO05D009151 1.9e-10 72.0 242 25.2
Ca_26412_v3 Cicer arietinum L. HOM05D007552 ORTHO05D009397 4.2e-10 70.9 81 40.7
Carub.0005s1609 Capsella rubella HOM05D000424 ORTHO05D000355 7.2e-10 70.1 179 27.9
Ca_25555_v3 Cicer arietinum L. HOM05D007552 ORTHO05D009397 3.6e-09 67.8 82 41.5
Sc09g0001040 Simmondsia chinensis HOM05D006596 ORTHO05D008497 6.1e-09 67.0 202 25.7
Aqoxy1G00603 Aquilegia oxysepala HOM05D006596 ORTHO05D008497 2.3e-08 65.1 202 25.7
Sp5g12350 Schrenkiella parvula HOM05D000424 ORTHO05D000355 3.0e-08 64.7 179 25.7
SEGI_35089 Sequoiadendron giganteum HOM05D007552 ORTHO05D009397 3.0e-08 64.7 103 28.2
Thhalv10010190m.g Eutrema salsugineum HOM05D000424 ORTHO05D000355 4.0e-08 64.3 169 26.0
BcaB01g00677 Brassica carinata HOM05D000424 ORTHO05D000355 8.8e-08 63.2 169 25.4
Ah.03g138540 Amaranthus hybridus HOM05D007145 ORTHO05D008952 1.2e-07 62.8 218 24.3
Thecc.02G273600 Theobroma cacao HOM05D000424 ORTHO05D008586 1.5e-07 62.4 202 26.2
AUR62043158 Chenopodium quinoa HOM05D007145 ORTHO05D008952 2.6e-07 61.6 212 23.6
Gohir.A03G129100 Gossypium hirsutum HOM05D000424 ORTHO05D008586 4.4e-07 60.8 190 24.2
vmacro19218 Vaccinium macrocarpon HOM05D007173 ORTHO05D009151 4.4e-07 60.8 209 24.9
AT5G65820 Arabidopsis thaliana HOM05D000424 ORTHO05D000355 5.7e-07 60.5 218 22.0
CDE02G2213 Ceratophyllum demersum HOM05D007173 ORTHO05D009151 5.7e-07 60.5 191 24.1
Gohir.D02G152900 Gossypium hirsutum HOM05D000424 ORTHO05D008586 7.5e-07 60.1 190 23.7
Gorai.005G172000 Gossypium raimondii HOM05D000424 ORTHO05D008586 7.5e-07 60.1 190 23.7
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 9.8e-07 59.7 191 24.1
GSVIVG01026463001 Vitis vinifera HOM05D007173 ORTHO05D009151 9.8e-07 59.7 188 23.4
COL.COLO4_23614 Corchorus olitorius HOM05D000424 ORTHO05D008586 1.3e-06 59.3 190 23.7
Glyma.16G058400 Glycine max HOM05D000424 ORTHO05D008586 1.3e-06 59.3 172 23.8
Nitab4.5_0002731g0040 Nicotiana tabacum HOM05D007552 ORTHO05D009397 1.3e-06 59.3 107 32.7
CSS0029634 Camellia sinensis var. sinensis HOM05D007173 ORTHO05D009151 1.7e-06 58.9 175 25.7
Ciclev10031257m.g Citrus clementina HOM05D000424 ORTHO05D008586 1.7e-06 58.9 195 23.6
TAR383G0679 Trochodendron aralioides HOM05D007173 ORTHO05D009151 2.2e-06 58.5 248 22.6
Aa31LG4G18220 Aethionema arabicum HOM05D000424 ORTHO05D000355 2.8e-06 58.2 137 25.5
AL8G43540 Arabidopsis lyrata HOM05D000424 ORTHO05D000355 2.8e-06 58.2 159 23.9
CSS0050477 Camellia sinensis var. sinensis HOM05D007173 ORTHO05D009151 3.7e-06 57.8 175 25.1
Sp2g28910 Schrenkiella parvula HOM05D000424 ORTHO05D000355 3.7e-06 57.8 152 25.0
TPR.G20566 Trifolium pratense HOM05D007552 ORTHO05D009397 4.8e-06 57.4 83 38.6
Potri.013G053600 Populus trichocarpa HOM05D000424 ORTHO05D000355 6.3e-06 57.0 203 24.6


User provided reference genes

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