Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01159 Erythranthe guttata HOM05D005017 ORTHO05D006044 1.1e-165 586.6 313 100.0
Migut.I00995 Erythranthe guttata HOM05D005017 ORTHO05D006044 1.4e-11 74.7 63 65.1
SGA_v2.0_scaffold71G23756 Striga asiatica HOM05D005017 ORTHO05D006044 1.7e-09 67.8 64 56.2
CSS0006284 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 5.0e-09 66.2 63 57.1
CSS0030454 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 5.0e-09 66.2 63 57.1
Duzib235G0510 Durio zibethinus HOM05D005017 ORTHO05D006044 2.5e-08 63.9 64 53.1
Oeu052817.1 Olea europaea HOM05D005017 ORTHO05D006044 2.5e-08 63.9 63 57.1
MSTRG.22609 Avicennia marina HOM05D005017 ORTHO05D006044 4.2e-08 63.2 64 53.1
Nitab4.5_0004848g0030 Nicotiana tabacum HOM05D005017 ORTHO05D006044 7.2e-08 62.4 58 55.2
CAN.G1668.3 Capsicum annuum HOM05D005017 ORTHO05D006044 9.4e-08 62.0 58 55.2
Dinv30400 Davidia involucrata HOM05D005017 ORTHO05D006044 9.4e-08 62.0 63 50.8
Dinv37934 Davidia involucrata HOM05D005017 ORTHO05D006044 9.4e-08 62.0 62 54.8
Gohir.D03G057100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 1.6e-07 61.2 64 50.0
Peaxi162Scf00038g01246 Petunia axillaris HOM05D005017 ORTHO05D006044 2.1e-07 60.8 59 54.2
Sopen03g040120 Solanum pennellii HOM05D005017 ORTHO05D006044 2.1e-07 60.8 58 56.9
Thecc.06G107700 Theobroma cacao HOM05D005017 ORTHO05D006044 2.1e-07 60.8 64 50.0
Actinidia32130 Actinidia chinensis HOM05D005017 ORTHO05D006044 2.7e-07 60.5 64 50.0
Cpa.g.sc663.1 Carica papaya HOM05D005017 ORTHO05D006044 3.6e-07 60.1 64 48.4
Ciclev10026315m.g Citrus clementina HOM05D005017 ORTHO05D006044 3.6e-07 60.1 64 50.0
Gorai.003G060200 Gossypium raimondii HOM05D005017 ORTHO05D006044 3.6e-07 60.1 64 48.4
Manes.04G137400 Manihot esculenta HOM05D005017 ORTHO05D006044 3.6e-07 60.1 59 52.5
Nn8g38928 Nelumbo nucifera HOM05D005017 ORTHO05D006044 3.6e-07 60.1 63 52.4
Potri.001G199500 Populus trichocarpa HOM05D005017 ORTHO05D006044 3.6e-07 60.1 63 50.8
Gohir.A02G116100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 4.7e-07 59.7 64 48.4
vmacro18822 Vaccinium macrocarpon HOM05D005017 ORTHO05D006044 4.7e-07 59.7 57 54.4
HanXRQChr04g0095781 Helianthus annuus HOM05D005017 ORTHO05D006044 6.1e-07 59.3 64 50.0
Lsat_1_v5_gn_1_36441 Lactuca sativa HOM05D005017 ORTHO05D006044 6.1e-07 59.3 64 50.0
Nitab4.5_0006071g0010 Nicotiana tabacum HOM05D005017 ORTHO05D006044 6.1e-07 59.3 56 55.4
BcaC08g43934 Brassica carinata HOM05D005017 ORTHO05D006044 7.9e-07 58.9 64 50.0
C06p13290 Brassica napus HOM05D005017 ORTHO05D006044 7.9e-07 58.9 64 50.0
BolC6t36489H Brassica oleracea HOM05D005017 ORTHO05D006044 7.9e-07 58.9 64 50.0
BraA05t20844Z Brassica rapa HOM05D005017 ORTHO05D006044 7.9e-07 58.9 64 50.0
Actinidia21740 Actinidia chinensis HOM05D005017 ORTHO05D006044 1.0e-06 58.5 64 48.4
A05p19400 Brassica napus HOM05D005017 ORTHO05D006044 1.0e-06 58.5 64 50.0
Cc04_g02270 Coffea canephora HOM05D005017 ORTHO05D006044 1.0e-06 58.5 64 48.4
Solyc03g121310.2 Solanum lycopersicum HOM05D005017 ORTHO05D006044 1.4e-06 58.2 58 55.2
Rhsim08G0231100 Rhododendron simsii HOM05D005017 ORTHO05D006044 1.8e-06 57.8 59 50.8
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 1.8e-06 57.8 63 49.2
Phvul.010G142100 Phaseolus vulgaris HOM05D005017 ORTHO05D006044 2.3e-06 57.4 63 49.2
SEGI_04320 Sequoiadendron giganteum HOM05D005017 ORTHO05D006044 2.3e-06 57.4 63 49.2
PGSC0003DMG401002511 Solanum tuberosum HOM05D005017 ORTHO05D006044 2.3e-06 57.4 58 53.4
ATR0789G068 Amborella trichopoda HOM05D005017 ORTHO05D006044 3.0e-06 57.0 63 50.8
COL.COLO4_30606 Corchorus olitorius HOM05D005017 ORTHO05D006044 3.0e-06 57.0 53 56.6
MBI01_g27633_MAGBIO Magnolia biondii HOM05D005017 ORTHO05D006044 3.0e-06 57.0 63 50.8
PGR102G3241 Punica granatum HOM05D005017 ORTHO05D006044 3.9e-06 56.6 62 48.4
SalBow6G5092 Salvia bowleyana HOM05D005017 ORTHO05D006044 3.9e-06 56.6 72 45.8
TAR624G0026 Trochodendron aralioides HOM05D005017 ORTHO05D006044 3.9e-06 56.6 63 49.2
CARHR041890 Cardamine hirsuta HOM05D005017 ORTHO05D006044 5.1e-06 56.2 64 46.9
Haze_15918 Corylus avellana HOM05D005017 ORTHO05D006044 5.1e-06 56.2 61 47.5
ECA247G1989 Erigeron canadensis HOM05D005017 ORTHO05D006044 5.1e-06 56.2 65 50.8
Lalb_Chr01g0013321 Lupinus albus HOM05D005017 ORTHO05D006044 5.1e-06 56.2 63 49.2
unitig_0.g2868 Utricularia gibba HOM05D005017 ORTHO05D006044 5.1e-06 56.2 64 50.0
GSVIVG01016892001 Vitis vinifera HOM05D005017 ORTHO05D006044 5.1e-06 56.2 63 49.2
AL1G59670 Arabidopsis lyrata HOM05D005017 ORTHO05D006044 6.7e-06 55.8 67 44.8
C03p90280 Brassica napus HOM05D005017 ORTHO05D006044 6.7e-06 55.8 64 46.9


User provided reference genes

Program Settings