Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 1.1e-92 343.2 168 100.0
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 7.7e-33 144.4 169 50.9
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 9.8e-28 127.5 171 47.4
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 1.7e-27 126.7 169 49.1
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 3.7e-27 125.6 170 48.2
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 3.7e-27 125.6 170 47.6
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 7.0e-26 121.3 169 44.4
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 2.0e-25 119.8 170 45.9
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 6.5e-24 114.8 172 44.8
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 3.2e-23 112.5 178 46.1
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 5.5e-23 111.7 172 44.8
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 1.6e-22 110.2 170 42.9
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 3.6e-22 109.0 170 42.4
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 4.7e-22 108.6 178 45.5
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 1.0e-21 107.5 145 44.1
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.0e-21 107.5 170 45.3
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 1.8e-21 106.7 168 44.6
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 1.2e-20 104.0 169 43.2
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 1.2e-20 104.0 177 42.4
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 1.7e-19 100.1 168 40.5
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 2.2e-19 99.8 169 40.8
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 2.8e-19 99.4 176 40.9
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 6.3e-19 98.2 172 37.8
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 2.4e-18 96.3 170 40.6
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 2.4e-18 96.3 170 38.8
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 3.1e-18 95.9 172 38.4
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 3.1e-18 95.9 172 37.8
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 4.1e-18 95.5 174 37.9
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 4.1e-18 95.5 168 40.5
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 4.1e-18 95.5 168 40.5
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 5.4e-18 95.1 170 38.2
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 7.0e-18 94.7 158 38.6
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 9.2e-18 94.4 173 38.7
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.2e-17 94.0 170 38.2
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 1.6e-17 93.6 156 40.4
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 2.7e-17 92.8 160 40.6
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 3.5e-17 92.4 155 41.3
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 4.5e-17 92.0 171 38.0
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 5.9e-17 91.7 167 38.3
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 7.7e-17 91.3 141 41.1
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 1.3e-16 90.5 152 40.1
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 1.3e-16 90.5 152 40.1
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 2.3e-16 89.7 169 37.9
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 2.9e-16 89.4 171 38.6
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 5.0e-16 88.6 170 38.2
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.1e-15 87.4 172 39.0
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 1.5e-15 87.0 174 39.7
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 1.9e-15 86.7 173 39.9
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 1.9e-15 86.7 161 39.8
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 1.9e-15 86.7 171 39.8
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.9e-15 86.7 171 39.8
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.9e-15 86.7 171 39.8
MSTRG.9544 Avicennia marina HOM05D008031 ORTHO05D010063 2.5e-15 86.3 149 40.9
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 4.3e-15 85.5 174 39.7
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 4.3e-15 85.5 174 38.5
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 7.3e-15 84.7 174 39.7
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 9.5e-15 84.3 169 39.1
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 9.5e-15 84.3 171 39.2
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 1.6e-14 83.6 150 38.0
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.1e-14 83.2 166 36.1
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 2.8e-14 82.8 172 37.2
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 4.7e-14 82.0 173 35.8
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 8.0e-14 81.3 153 36.6
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 2.3e-13 79.7 162 38.9
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 2.3e-13 79.7 175 35.4
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 2.3e-13 79.7 154 35.7
DCAR_022641 Daucus carota HOM05D008031 ORTHO05D010063 2.3e-13 79.7 155 39.4
Hund18631 Selenicereus undatus HOM05D008031 ORTHO05D010063 2.3e-13 79.7 165 38.8
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 4.0e-13 79.0 154 38.3
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 5.2e-13 78.6 169 35.5
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 8.9e-13 77.8 150 37.3
SalBow6G0345 Salvia bowleyana HOM05D008031 ORTHO05D010063 1.2e-12 77.4 172 37.2
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 2.0e-12 76.6 174 36.2
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 3.4e-12 75.9 179 33.0
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 7.5e-12 74.7 150 39.3
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 3.0e-08 62.8 108 42.6
SEGI_30103 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 5.0e-08 62.0 181 29.3
SEGI_39614 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 5.0e-08 62.0 181 29.3
CDE05G1539 Ceratophyllum demersum HOM05D008031 ORTHO05D010063 1.9e-07 60.1 172 32.0
ATR0099G028 Amborella trichopoda HOM05D008031 ORTHO05D010063 1.6e-06 57.0 123 38.2
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 2.1e-06 56.6 172 32.6


User provided reference genes

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