Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 3.1e-66 255.4 167 100.0
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 1.5e-52 209.9 173 75.7
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 3.3e-36 155.6 180 63.9
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 1.3e-35 153.7 180 66.1
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 1.7e-35 153.3 180 62.8
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 2.8e-35 152.5 162 71.0
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 8.2e-35 151.0 182 65.9
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 2.4e-34 149.4 196 59.7
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.1e-34 148.7 173 66.5
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 1.5e-33 146.7 173 65.9
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 2.0e-33 146.4 163 68.1
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 2.0e-33 146.4 178 61.8
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 2.6e-33 146.0 167 68.9
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 3.4e-33 145.6 173 65.3
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 3.4e-33 145.6 206 56.8
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.0e-32 144.1 161 63.4
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 1.3e-32 143.7 163 66.9
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 1.7e-32 143.3 201 57.2
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 2.9e-32 142.5 193 56.0
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.9e-32 142.5 161 56.5
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 1.1e-31 140.6 149 73.2
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 1.1e-31 140.6 175 65.1
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.4e-31 140.2 157 69.4
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 1.4e-31 140.2 179 62.6
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 1.9e-31 139.8 157 69.4
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 2.5e-31 139.4 161 65.8
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 1.6e-30 136.7 185 62.2
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 4.7e-30 135.2 193 59.6
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 4.7e-30 135.2 165 52.7
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 6.7e-29 131.3 161 55.9
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 6.7e-29 131.3 183 61.2
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 8.8e-29 131.0 178 61.8
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 2.0e-28 129.8 179 60.3
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 2.0e-28 129.8 95 68.4
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 2.6e-28 129.4 175 56.0
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 9.7e-28 127.5 95 66.3
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 9.7e-28 127.5 186 59.1
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 1.3e-27 127.1 163 60.1
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 1.7e-27 126.7 91 68.1
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 2.2e-27 126.3 95 67.4
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 3.7e-27 125.6 194 49.5
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 8.2e-27 124.4 97 62.9
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 1.1e-26 124.0 95 67.4
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 1.1e-26 124.0 95 67.4
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 1.1e-26 124.0 95 64.2
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 3.1e-26 122.5 96 62.5
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 6.9e-26 121.3 95 64.2
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 6.9e-26 121.3 95 64.2
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 9.1e-26 120.9 95 65.3
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.5e-25 120.2 167 62.9
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 2.0e-25 119.8 201 53.7
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 2.0e-25 119.8 163 54.0
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 3.4e-25 119.0 228 46.5
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 5.9e-25 118.2 183 54.6
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 5.9e-25 118.2 155 63.9
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 7.7e-25 117.9 235 44.7
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 7.7e-25 117.9 219 45.7
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 1.0e-24 117.5 95 60.0
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 1.3e-24 117.1 187 49.2
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 1.7e-24 116.7 95 64.2
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 1.7e-24 116.7 88 64.8
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 1.7e-24 116.7 230 40.0
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 2.2e-24 116.3 88 64.8
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 2.9e-24 115.9 223 36.8
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 3.8e-24 115.5 229 45.9
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 3.8e-24 115.5 147 52.4
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 1.4e-23 113.6 231 45.0
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 1.4e-23 113.6 159 45.3
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 1.9e-23 113.2 91 59.3
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.9e-23 113.2 147 58.5
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 1.9e-23 113.2 95 61.1
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 3.2e-23 112.5 95 58.9
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 3.2e-23 112.5 91 61.5
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 3.2e-23 112.5 84 69.0
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 1.6e-22 110.2 95 56.8
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 1.0e-21 107.5 84 64.3
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 1.4e-21 107.1 86 61.6
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 1.8e-21 106.7 83 63.9
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 2.3e-21 106.3 205 50.7
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 3.0e-21 105.9 88 59.1
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 6.7e-21 104.8 242 38.8
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 1.1e-20 104.0 85 62.4
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 1.5e-20 103.6 89 59.6
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 1.5e-20 103.6 91 54.9
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 3.3e-20 102.4 85 63.5
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 3.3e-20 102.4 215 46.0
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 1.7e-19 100.1 218 45.4
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 1.4e-18 97.1 154 46.1
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 9.1e-18 94.4 125 53.6
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 1.2e-17 94.0 77 59.7
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 3.5e-17 92.4 96 55.2
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 7.7e-17 91.3 90 48.9
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 7.7e-17 91.3 90 48.9
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 1.0e-16 90.9 90 51.1
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 1.7e-16 90.1 96 54.2
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 2.2e-16 89.7 94 50.0
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 5.0e-16 88.6 90 48.9
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 5.0e-16 88.6 90 48.9
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 5.0e-16 88.6 90 48.9
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 3.2e-15 85.9 85 55.3
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 3.2e-15 85.9 85 55.3
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 4.2e-15 85.5 86 53.5
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 7.2e-15 84.7 96 45.8
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 9.4e-15 84.3 91 51.6
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 3.6e-14 82.4 179 52.0
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 8.8e-13 77.8 79 58.2
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 2.0e-12 76.6 78 55.1
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 4.4e-12 75.5 89 44.9
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 5.7e-12 75.1 81 50.6
Nitab4.5_0002964g0020 Nicotiana tabacum HOM05D006504 ORTHO05D007867 1.7e-11 73.6 127 62.2
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 1.7e-11 73.6 50 68.0
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 4.8e-11 72.0 79 55.7
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 8.2e-11 71.2 78 50.0
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 1.1e-10 70.9 47 68.1
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 3.5e-09 65.9 43 74.4
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 2.2e-08 63.2 71 45.1
SalBow6G4228 Salvia bowleyana HOM05D006504 ORTHO05D007867 1.5e-07 60.5 35 80.0
SalBow6G4685 Salvia bowleyana HOM05D006504 ORTHO05D007867 1.5e-07 60.5 35 80.0
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 1.9e-07 60.1 89 43.8
unitig_748.g8021 Utricularia gibba HOM05D000360 ORTHO05D000234 1.6e-06 57.0 38 68.4
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 3.6e-06 55.8 87 37.9


User provided reference genes

Program Settings