Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 0.0e+00 1325.1 670 100.0
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 0.0e+00 1079.7 672 81.2
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 3.2e-263 911.8 663 69.1
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 3.5e-262 908.3 650 70.6
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 1.7e-261 906.0 667 68.5
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 5.1e-261 904.4 678 68.3
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 6.6e-261 904.0 678 68.4
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 1.9e-260 902.5 658 69.0
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 8.1e-259 897.1 660 68.5
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 1.1e-258 896.7 654 68.8
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 5.3e-258 894.4 666 68.0
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 6.9e-258 894.0 671 67.8
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 9.0e-258 893.6 675 67.6
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 9.0e-258 893.6 670 68.5
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.2e-257 893.3 653 67.8
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 3.4e-257 891.7 653 67.5
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 1.7e-256 889.4 665 67.4
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 1.1e-255 886.7 647 69.2
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 1.9e-255 885.9 656 68.0
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 7.8e-254 880.6 668 66.9
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 6.6e-253 877.5 659 67.2
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 6.6e-253 877.5 658 67.5
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 2.5e-252 875.5 653 67.7
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 4.3e-252 874.8 670 69.3
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 2.1e-251 872.5 668 66.6
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 2.8e-251 872.1 660 67.1
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 6.9e-250 867.5 665 66.6
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 1.2e-249 866.7 659 65.9
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 1.5e-249 866.3 650 67.7
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 2.0e-249 865.9 661 66.1
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 9.9e-249 863.6 664 66.1
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 1.3e-248 863.2 669 65.9
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 7.1e-247 857.4 670 64.8
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 9.3e-247 857.1 671 66.5
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 2.1e-246 855.9 661 66.4
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 2.7e-246 855.5 623 68.4
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 2.7e-246 855.5 666 65.0
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 3.5e-246 855.1 669 65.6
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 4.6e-246 854.7 667 66.0
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 4.6e-246 854.7 657 65.8
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 6.0e-246 854.4 669 65.6
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 1.0e-245 853.6 662 65.3
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 5.1e-245 851.3 665 65.4
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 2.5e-244 849.0 672 65.2
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 2.5e-244 849.0 664 66.1
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 2.5e-244 849.0 668 65.0
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 4.8e-243 844.7 659 64.0
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 3.1e-242 842.0 659 65.1
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 9.0e-242 840.5 669 65.5
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 1.5e-241 839.7 661 65.4
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 1.5e-241 839.7 659 64.9
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 3.4e-241 838.6 659 64.6
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 3.4e-241 838.6 668 64.8
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.7e-240 836.3 659 64.6
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 1.4e-239 833.2 660 63.9
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 2.5e-239 832.4 670 63.9
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 9.3e-239 830.5 658 63.8
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 1.8e-237 826.2 660 63.6
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 3.0e-237 825.5 668 63.8
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 9.6e-236 820.5 581 69.0
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 2.1e-235 819.3 664 62.3
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 2.1e-235 819.3 656 64.0
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 6.2e-235 817.8 660 62.9
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 6.2e-235 817.8 660 62.9
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 6.2e-235 817.8 660 62.9
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 3.1e-234 815.5 671 62.4
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 5.3e-234 814.7 671 63.2
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 1.5e-233 813.1 660 62.9
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 5.8e-233 811.2 660 63.0
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 5.8e-233 811.2 677 62.9
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 2.2e-232 809.3 654 63.3
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 2.2e-232 809.3 671 61.8
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 2.9e-232 808.9 654 63.3
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 6.5e-232 807.7 662 61.9
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 8.4e-232 807.4 662 61.8
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 8.4e-232 807.4 636 66.8
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 7.1e-231 804.3 654 62.8
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 6.9e-226 787.7 663 63.2
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 6.5e-224 781.2 660 61.5
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 5.5e-223 778.1 661 62.0
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 2.3e-221 772.7 660 60.9
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 3.0e-221 772.3 628 63.4
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 5.1e-221 771.5 647 60.7
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 1.5e-220 770.0 660 61.1
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 3.3e-220 768.8 670 61.5
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 7.7e-217 757.7 660 60.0
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 6.5e-216 754.6 660 59.8
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 5.0e-208 728.4 686 58.2
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 5.9e-201 704.9 533 67.0
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 1.9e-199 699.9 565 62.7
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 8.0e-198 694.5 663 57.9
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 3.1e-194 682.6 554 62.6
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 1.8e-189 666.8 442 74.9
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 2.2e-187 659.8 619 58.3
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 2.3e-184 649.8 657 55.4
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 7.5e-180 634.8 655 55.6
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 4.3e-175 619.0 663 54.0
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 1.1e-159 567.8 512 58.0
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 1.6e-158 563.9 658 46.8
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 4.4e-156 555.8 666 44.9
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.4e-154 550.8 659 47.6
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 5.6e-151 538.9 652 43.3
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 3.4e-148 529.6 669 42.0
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 4.9e-147 525.8 579 52.0
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 5.9e-116 422.5 668 37.7
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 4.2e-82 310.1 340 52.1
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 5.7e-71 273.1 234 53.8
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 8.6e-59 232.6 287 49.8
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 1.7e-43 181.8 124 70.2
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 6.2e-41 173.3 276 37.3
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 2.0e-39 168.3 107 75.7
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 9.9e-39 166.0 202 50.0
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 1.7e-38 165.2 107 74.8
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 6.4e-38 163.3 157 54.8
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 1.9e-37 161.8 110 73.6
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 1.6e-36 158.7 153 48.4
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 1.5e-34 152.1 224 38.8
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 4.0e-32 144.1 94 73.4
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 2.2e-30 138.3 132 58.3
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.1e-29 136.0 157 48.4
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.4e-29 134.8 100 68.0
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 2.1e-28 131.7 85 72.9
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 3.5e-28 131.0 172 46.5
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 1.0e-27 129.4 83 75.9
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.3e-27 128.3 157 48.4
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 7.3e-26 123.2 80 75.0
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 3.1e-24 117.9 92 66.3
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 5.6e-18 97.1 102 56.9
HanXRQChr05g0131511 Helianthus annuus HOM05D005721 ORTHO05D006758 1.4e-16 92.4 101 51.5
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 6.9e-16 90.1 468 22.9
arahy.Tifrunner.gnm1.ann1.EXE9LQ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.3e-14 85.9 75 60.0
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 8.4e-14 83.2 91 47.3
Glyma.19G071451 Glycine max HOM05D005721 ORTHO05D006758 1.1e-13 82.8 54 72.2
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 3.2e-13 81.3 48 79.2
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 1.6e-12 79.0 204 28.4


User provided reference genes

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