Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 5.3e-26 120.9 60 100.0
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 4.0e-18 94.7 59 79.7
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.7e-16 89.4 51 84.3
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 3.8e-16 88.2 54 77.8
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 3.8e-16 88.2 53 79.2
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.1e-15 86.7 60 76.7
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 1.1e-15 86.7 53 79.2
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 1.1e-15 86.7 54 75.9
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 1.9e-15 85.9 53 77.4
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 2.5e-15 85.5 55 72.7
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 7.1e-15 84.0 53 77.4
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 9.3e-15 83.6 56 75.0
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 2.7e-14 82.0 58 67.2
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.0e-13 80.1 55 72.7
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.0e-13 80.1 55 72.7
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.0e-13 80.1 55 72.7
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.3e-13 79.7 54 74.1
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 3.0e-13 78.6 43 83.7
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 5.1e-13 77.8 53 66.0
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 8.7e-13 77.0 53 71.7
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 8.7e-13 77.0 50 74.0
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.5e-12 76.3 58 75.9
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 1.9e-12 75.9 42 83.3
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 2.5e-12 75.5 54 74.1
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 2.5e-12 75.5 51 70.6
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 5.7e-12 74.3 45 75.6
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 9.7e-12 73.6 54 68.5
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 1.3e-11 73.2 52 69.2
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 1.6e-11 72.8 50 68.0
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 1.6e-11 72.8 54 66.7
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 2.2e-11 72.4 46 80.4
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 6.3e-11 70.9 52 67.3
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 8.2e-11 70.5 52 67.3
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.1e-10 70.1 52 67.3
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 2.4e-10 68.9 51 66.7
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 4.1e-10 68.2 62 59.7
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 5.3e-10 67.8 52 65.4
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 5.3e-10 67.8 54 64.8
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.5e-09 66.2 45 71.1
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 2.0e-09 65.9 54 63.0
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 2.6e-09 65.5 45 71.1
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 2.6e-09 65.5 51 62.7
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 4.5e-09 64.7 52 61.5
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 7.6e-09 63.9 45 71.1
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 1.0e-08 63.5 44 65.9
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 1.3e-08 63.2 51 62.7
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 1.3e-08 63.2 58 56.9
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 1.3e-08 63.2 51 64.7
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 2.2e-08 62.4 51 60.8
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 2.2e-08 62.4 43 67.4
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 2.2e-08 62.4 44 70.5
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 5.0e-08 61.2 51 60.8
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.9e-07 59.3 45 64.4
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 5.5e-07 57.8 55 60.0
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 7.2e-07 57.4 43 62.8
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 7.2e-07 57.4 55 56.4
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 9.3e-07 57.0 51 60.8
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 1.2e-06 56.6 50 56.0
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 1.6e-06 56.2 51 58.8
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 2.7e-06 55.5 50 60.0
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 2.7e-06 55.5 53 50.9
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 3.6e-06 55.1 47 59.6
BcaB06g26220 Brassica carinata HOM05D011376 ORTHO05D013452 7.9e-06 53.9 52 57.7


User provided reference genes

Program Settings