Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 5.2e-72 274.2 135 100.0
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.5e-39 166.4 107 76.6
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 5.6e-34 147.9 102 70.6
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 9.3e-29 130.6 103 64.1
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 3.0e-27 125.6 92 66.3
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.8e-24 116.3 105 57.1
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 1.8e-24 116.3 110 55.5
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 4.0e-24 115.2 105 57.1
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 6.9e-24 114.4 105 57.1
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 9.9e-23 110.5 110 56.4
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.3e-22 110.2 98 59.2
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 3.8e-22 108.6 93 58.1
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 8.4e-22 107.5 80 67.5
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.9e-21 106.3 104 58.7
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 4.2e-21 105.1 95 58.9
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 1.6e-20 103.2 113 52.2
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 2.7e-20 102.4 107 55.1
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 3.5e-20 102.1 98 57.1
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 6.0e-20 101.3 80 62.5
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 6.0e-20 101.3 130 46.9
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 7.9e-20 100.9 112 50.0
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.9e-20 100.9 132 46.2
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.0e-19 100.5 123 45.5
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.8e-19 99.8 113 51.3
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 1.8e-19 99.8 97 58.8
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 3.0e-19 99.0 105 50.5
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.9e-19 98.6 113 51.3
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 5.1e-19 98.2 134 44.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 5.1e-19 98.2 123 47.2
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.1e-19 98.2 93 55.9
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.1e-19 98.2 93 55.9
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.5e-18 96.7 95 57.9
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 1.5e-18 96.7 112 48.2
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 1.5e-18 96.7 96 54.2
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.5e-18 96.7 136 45.6
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.9e-18 96.3 118 50.0
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.9e-18 96.3 61 70.5
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 2.5e-18 95.9 89 58.4
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 2.5e-18 95.9 89 58.4
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 2.5e-18 95.9 89 58.4
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.5e-18 95.9 89 57.3
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.5e-18 95.9 123 46.3
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.5e-18 95.9 118 47.5
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.5e-18 95.9 111 50.5
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 3.3e-18 95.5 97 54.6
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 4.3e-18 95.1 112 46.4
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 4.3e-18 95.1 104 49.0
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 4.3e-18 95.1 92 53.3
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 4.3e-18 95.1 87 58.6
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 4.3e-18 95.1 115 48.7
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 5.6e-18 94.7 89 57.3
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 5.6e-18 94.7 103 52.4
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 5.6e-18 94.7 117 50.4
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 7.4e-18 94.4 129 45.0
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.4e-18 94.4 92 57.6
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.4e-18 94.4 92 57.6
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 7.4e-18 94.4 92 57.6
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 7.4e-18 94.4 87 57.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 7.4e-18 94.4 107 49.5
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 9.6e-18 94.0 107 48.6
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.3e-17 93.6 104 48.1
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 1.6e-17 93.2 93 53.8
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.6e-17 93.2 119 47.1
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.6e-17 93.2 130 43.8
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.6e-17 93.2 123 41.5
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 2.8e-17 92.4 114 46.5
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.6e-17 92.0 118 46.6
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 3.6e-17 92.0 137 43.8
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 4.8e-17 91.7 115 45.2
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 4.8e-17 91.7 111 46.8
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 6.2e-17 91.3 88 55.7
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 8.1e-17 90.9 93 52.7
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 8.1e-17 90.9 113 46.0
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 8.1e-17 90.9 109 49.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 8.1e-17 90.9 92 56.5
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.1e-16 90.5 116 47.4
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 1.1e-16 90.5 114 46.5
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 1.4e-16 90.1 84 57.1
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.4e-16 90.1 87 56.3
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.4e-16 90.1 112 46.4
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.4e-16 90.1 116 47.4
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.4e-16 90.1 101 53.5
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.4e-16 90.1 101 53.5
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.8e-16 89.7 113 46.0
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.8e-16 89.7 113 46.0
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.8e-16 89.7 107 48.6
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 2.4e-16 89.4 81 56.8
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 2.4e-16 89.4 129 44.2
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.1e-16 89.0 113 46.0
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 3.1e-16 89.0 112 48.2
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 4.0e-16 88.6 123 44.7
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.0e-16 88.6 113 46.0
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 5.3e-16 88.2 115 46.1
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 6.9e-16 87.8 114 44.7
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 6.9e-16 87.8 107 47.7
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 6.9e-16 87.8 96 51.0
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.2e-15 87.0 109 43.1
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 1.2e-15 87.0 111 47.7
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.0e-15 86.3 110 45.5
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.4e-15 85.5 89 51.7
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.8e-15 84.7 133 41.4
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 7.6e-15 84.3 83 53.0
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.7e-14 83.2 133 39.8
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.7e-14 83.2 105 45.7
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 3.8e-14 82.0 108 45.4
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 3.8e-14 82.0 105 44.8
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 8.4e-14 80.9 97 46.4
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 2.4e-13 79.3 114 42.1
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 4.2e-13 78.6 98 46.9
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 5.5e-13 78.2 105 44.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 7.1e-13 77.8 113 41.6
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 1.2e-12 77.0 104 44.2
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.1e-12 76.3 133 38.3
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 2.1e-12 76.3 83 48.2
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 2.7e-12 75.9 111 42.3
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.6e-12 75.1 90 47.8
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 5.1e-11 71.6 115 40.9
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 5.1e-11 71.6 66 60.6
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 5.1e-11 71.6 86 40.7
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.5e-10 70.1 99 39.4
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 9.6e-10 67.4 115 40.0
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 9.6e-10 67.4 117 35.0
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.7e-09 65.5 86 44.2
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.1e-08 63.9 103 37.9
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.5e-07 60.1 49 63.3
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 2.6e-07 59.3 95 35.8
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 3.4e-07 58.9 52 50.0
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 1.7e-06 56.6 87 41.4


User provided reference genes

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