Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 8.9e-273 943.0 461 100.0
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 2.1e-197 692.6 462 74.7
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 1.8e-196 689.5 461 74.2
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 1.8e-185 652.9 465 70.1
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 8.0e-181 637.5 460 67.8
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.5e-179 633.3 448 68.3
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 8.2e-178 627.5 450 68.4
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 7.0e-177 624.4 377 76.9
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 2.0e-176 622.9 443 69.1
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.0e-176 622.9 462 67.3
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 1.0e-175 620.5 453 67.3
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 1.7e-175 619.8 387 74.4
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 2.2e-175 619.4 468 66.2
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 5.0e-175 618.2 463 68.3
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 5.0e-175 618.2 456 65.8
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 8.5e-175 617.5 474 66.0
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 3.2e-174 615.5 484 64.0
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 3.2e-174 615.5 383 74.4
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 3.2e-174 615.5 466 65.9
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 3.2e-174 615.5 466 65.9
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 4.2e-174 615.1 463 65.9
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 5.5e-174 614.8 463 66.1
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 2.1e-173 612.8 461 65.5
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 2.7e-173 612.5 380 75.0
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 4.7e-173 611.7 372 74.2
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 6.1e-173 611.3 449 66.1
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 1.4e-172 610.1 430 68.8
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.8e-172 609.8 384 74.5
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 1.8e-172 609.8 378 74.3
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 2.3e-172 609.4 462 64.5
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 2.3e-172 609.4 471 64.5
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-172 609.0 378 74.3
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-172 609.0 378 74.6
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 3.0e-172 609.0 390 73.3
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 3.0e-172 609.0 377 74.3
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 6.8e-172 607.8 394 73.4
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 8.8e-172 607.4 462 66.2
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 1.2e-171 607.1 443 65.9
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 2.0e-171 606.3 379 74.9
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 3.4e-171 605.5 416 69.5
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 3.4e-171 605.5 377 74.0
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 5.7e-171 604.7 388 72.9
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 7.5e-171 604.4 447 65.8
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 9.8e-171 604.0 380 73.9
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 9.8e-171 604.0 384 74.0
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.3e-170 603.6 462 65.2
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 3.7e-170 602.1 380 72.9
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 3.7e-170 602.1 354 78.0
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.7e-170 602.1 462 65.2
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 8.3e-170 600.9 379 73.6
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 1.1e-169 600.5 449 66.4
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 1.4e-169 600.1 382 73.3
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.4e-169 599.4 376 74.7
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 3.1e-169 599.0 457 65.0
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 7.0e-169 597.8 371 74.9
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 9.1e-169 597.4 455 63.3
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.6e-168 596.7 392 72.2
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 4.5e-168 595.1 399 70.9
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 4.5e-168 595.1 394 71.8
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 5.9e-168 594.7 402 69.7
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 7.7e-168 594.3 390 72.3
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 1.3e-167 593.6 348 78.4
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 2.2e-167 592.8 437 67.0
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 2.2e-167 592.8 383 72.1
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 2.9e-167 592.4 356 76.1
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 3.8e-167 592.0 387 71.8
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 8.5e-167 590.9 462 63.9
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 5.5e-166 588.2 396 70.2
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 2.7e-165 585.9 379 72.0
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 2.7e-165 585.9 381 72.2
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 1.4e-164 583.6 395 68.4
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 2.3e-164 582.8 380 72.4
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 3.0e-164 582.4 384 71.1
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 4.0e-164 582.0 390 70.5
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 6.8e-164 581.3 464 61.6
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 1.2e-163 580.5 397 68.0
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 2.0e-163 579.7 456 63.6
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 2.6e-163 579.3 349 75.9
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 4.4e-163 578.6 398 67.8
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 5.7e-163 578.2 377 70.8
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 9.8e-163 577.4 384 69.5
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 1.3e-162 577.0 457 63.7
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 1.7e-162 576.6 378 70.6
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 2.2e-162 576.2 377 71.1
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 1.1e-161 573.9 443 62.5
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.1e-161 573.9 378 71.7
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.8e-161 573.2 435 63.2
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 2.4e-161 572.8 350 74.3
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 3.1e-161 572.4 461 62.3
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 3.1e-161 572.4 461 62.3
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 3.1e-161 572.4 461 62.5
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 4.1e-161 572.0 456 61.6
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 4.1e-161 572.0 450 62.4
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 5.4e-161 571.6 455 62.6
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 5.4e-161 571.6 456 62.3
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 1.6e-160 570.1 389 68.6
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 2.0e-160 569.7 377 70.0
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 4.5e-160 568.5 454 62.1
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 5.9e-160 568.2 370 70.5
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 1.1e-158 563.9 375 69.9
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 1.9e-158 563.1 377 69.2
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 2.5e-158 562.8 386 69.9
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 4.3e-158 562.0 377 69.0
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 4.3e-158 562.0 379 69.9
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 5.6e-158 561.6 377 68.7
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 5.6e-158 561.6 377 68.7
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 1.2e-157 560.5 377 69.0
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 3.0e-156 555.8 354 71.5
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 3.0e-156 555.8 369 71.0
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 4.0e-156 555.4 486 58.6
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 1.3e-154 550.4 395 65.8
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 1.7e-154 550.1 358 70.7
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 5.0e-151 538.5 342 73.7
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 6.6e-151 538.1 318 79.2
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 1.1e-150 537.3 342 71.1
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 4.7e-149 531.9 390 65.1
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 6.8e-148 528.1 348 71.3
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 4.1e-145 518.8 351 68.1
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 7.8e-144 514.6 386 66.1
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 7.3e-142 508.1 330 72.7
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.9e-137 493.4 354 65.3
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 1.4e-129 467.2 284 74.6
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.3e-127 460.7 343 65.0
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 2.5e-126 456.4 351 61.0
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 5.4e-121 438.7 340 59.4
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 9.3e-121 438.0 335 61.5
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 2.1e-117 426.8 311 65.0
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 6.2e-117 425.2 276 71.0
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 3.1e-116 422.9 334 59.0
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 2.6e-115 419.9 336 56.8
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.5e-110 404.1 331 56.8
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 1.9e-110 403.7 247 76.9
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 8.4e-106 388.3 339 52.5
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 9.3e-89 331.6 332 47.0
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 1.1e-86 324.7 280 57.1
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 1.3e-82 311.2 279 55.9
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 3.6e-80 303.1 340 44.4
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 4.8e-77 292.7 326 47.5
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 3.8e-66 256.5 146 82.2
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 4.5e-59 233.0 129 79.8
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 2.3e-55 220.7 196 55.6
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 3.0e-39 167.2 164 47.6
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.5e-38 164.9 164 47.0
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 5.9e-35 152.9 284 35.2
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 5.9e-35 152.9 81 85.2
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.0e-34 152.1 242 38.0
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 8.3e-29 132.5 91 70.3
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 1.4e-28 131.7 75 76.0
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 1.1e-20 105.5 126 44.4
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 2.1e-16 91.3 82 51.2
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 3.6e-08 63.9 52 46.2


User provided reference genes

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