Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.4e-181 637.9 406 100.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.8e-160 569.7 406 88.7
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 3.2e-157 558.9 412 87.4
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.3e-154 548.9 406 86.5
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.8e-153 545.8 406 79.8
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 5.2e-152 541.6 406 74.4
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 8.9e-152 540.8 409 74.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 2.0e-151 539.7 408 80.4
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 3.4e-151 538.9 408 69.6
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.3e-150 537.0 409 80.2
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 6.4e-150 534.6 399 75.9
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.4e-149 533.5 406 73.9
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.4e-149 533.5 416 83.7
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 7.1e-149 531.2 408 77.7
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-148 530.4 406 68.7
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-148 530.4 406 68.7
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 6.0e-148 528.1 409 80.9
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 6.0e-148 528.1 420 79.0
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.0e-147 527.3 411 83.0
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.3e-147 526.9 406 67.7
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.7e-147 526.6 408 81.6
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 6.6e-147 524.6 420 80.5
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.5e-146 522.7 393 82.7
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 3.3e-146 522.3 407 84.8
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 5.6e-146 521.5 385 83.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.1e-145 519.6 409 76.0
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 3.6e-145 518.8 398 80.9
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 4.7e-145 518.5 417 72.2
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.8e-144 516.5 406 69.2
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.2e-143 513.8 411 76.9
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.0e-143 513.1 412 73.5
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.6e-143 512.7 411 79.3
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 3.4e-143 512.3 417 73.4
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.4e-143 512.3 410 75.9
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 4.4e-143 511.9 415 78.1
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 7.6e-143 511.1 401 75.8
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 7.6e-143 511.1 395 81.3
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 7.6e-143 511.1 407 76.2
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.7e-142 510.0 410 77.1
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 5.4e-141 505.0 414 68.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 7.1e-141 504.6 415 78.3
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.6e-140 501.9 403 72.7
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.7e-139 500.0 407 77.6
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 3.0e-139 499.2 415 79.5
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.9e-138 496.5 419 76.1
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.5e-138 496.1 418 72.0
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.6e-137 493.4 418 77.3
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.6e-137 493.4 418 80.6
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.1e-137 493.0 407 68.6
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 3.1e-136 489.2 411 71.5
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-135 486.9 426 76.1
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-133 479.6 418 73.2
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-133 479.2 413 72.9
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 1.6e-132 476.9 410 66.1
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 2.7e-132 476.1 417 74.6
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 4.6e-132 475.3 411 75.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.6e-132 475.3 416 73.6
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.3e-131 473.8 450 56.9
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-131 473.4 409 72.4
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.0e-131 472.6 411 76.2
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 5.1e-131 471.9 432 59.0
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.5e-130 470.3 402 62.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.5e-130 469.5 424 70.3
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 4.3e-130 468.8 431 68.9
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.1e-128 464.2 412 76.0
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.4e-128 463.8 419 67.8
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.8e-128 463.4 370 80.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.6e-127 459.5 399 60.9
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 4.5e-127 458.8 377 78.5
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 9.9e-127 457.6 405 72.8
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.3e-126 457.2 399 60.2
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 4.9e-126 455.3 408 73.8
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 6.4e-126 454.9 408 76.5
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 8.4e-126 454.5 411 65.9
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 8.4e-126 454.5 405 74.3
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 8.4e-126 454.5 405 74.3
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.9e-125 453.4 410 67.6
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.2e-125 452.6 373 64.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.2e-125 452.6 417 69.1
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 2.1e-124 449.9 354 82.8
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.7e-124 449.5 410 68.5
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.7e-124 449.5 412 73.1
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.7e-124 449.5 409 67.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.5e-124 449.1 412 69.4
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 4.6e-124 448.7 415 65.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 4.6e-124 448.7 409 73.6
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 4.6e-124 448.7 415 65.3
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 7.9e-124 448.0 416 64.4
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 7.9e-124 448.0 416 64.4
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-123 447.6 404 67.8
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 3.9e-123 445.7 409 77.0
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 4.3e-122 442.2 396 69.7
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.3e-122 442.2 395 66.6
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.7e-121 439.1 475 64.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 4.9e-118 428.7 360 70.3
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 6.0e-116 421.8 424 63.7
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.9e-116 421.4 366 60.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.3e-115 419.9 340 67.4
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.3e-115 419.9 311 74.6
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.4e-112 410.6 395 60.3
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 3.1e-112 409.5 300 82.7
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 9.0e-112 407.9 371 64.4
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.5e-111 407.1 435 60.5
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 3.4e-111 406.0 400 62.8
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.4e-111 406.0 388 59.5
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 7.9e-108 394.8 411 65.7
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.7e-107 391.7 407 66.1
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.5e-106 390.6 400 64.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-106 390.6 400 63.8
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 2.5e-106 389.8 342 69.3
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.8e-105 386.3 415 59.3
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.2e-103 380.9 355 56.6
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-103 378.6 423 60.3
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.5e-102 375.2 400 58.5
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 4.1e-96 355.9 399 53.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.2e-94 350.1 396 66.9
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 5.5e-93 345.5 446 47.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.6e-92 342.8 387 50.4
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.6e-90 336.7 368 52.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 8.2e-89 331.6 377 55.4
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 8.5e-86 321.6 168 89.9
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.2e-85 319.3 180 83.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 9.4e-85 318.2 343 47.5
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-84 317.8 329 49.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.9e-77 293.9 343 46.9
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 3.0e-75 286.6 365 54.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.3e-73 281.2 317 46.4
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-72 276.6 295 68.5
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 2.3e-70 270.4 292 71.6
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 3.8e-70 269.6 289 69.6
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.0e-66 257.3 141 86.5
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 7.8e-63 245.4 123 91.9
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 4.9e-57 226.1 257 52.9
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 8.6e-54 215.3 123 80.5
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.7e-52 209.5 156 73.1
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.7e-46 191.0 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.0e-46 190.3 173 56.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 3.1e-43 180.3 338 35.2
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.6e-42 177.2 92 85.9
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.2e-39 168.3 149 59.7
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.6e-29 132.9 262 32.4
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 3.4e-26 123.6 101 65.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 7.1e-16 89.4 77 51.9
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 5.6e-13 79.7 37 94.6
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 5.3e-11 73.2 59 59.3
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 2.2e-09 67.8 72 45.8


User provided reference genes

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