Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.2e-137 492.3 249 100.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.5e-82 308.9 251 71.3
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 4.6e-82 308.5 251 67.3
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.3e-73 280.4 246 64.2
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.7e-73 280.0 281 59.4
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 4.0e-70 268.9 190 72.6
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.2e-69 267.3 189 74.6
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 5.8e-69 265.0 189 73.5
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 7.6e-69 264.6 191 71.2
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-68 263.5 190 74.2
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 2.2e-68 263.1 233 63.5
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.1e-67 260.8 244 61.1
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.1e-67 260.8 189 73.5
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.4e-67 259.6 244 61.9
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 5.4e-67 258.5 241 60.6
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.2e-66 257.3 189 71.4
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.6e-66 256.9 264 58.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.7e-66 256.1 193 71.0
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 7.8e-66 254.6 190 71.1
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.3e-65 253.8 191 70.7
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.7e-65 253.4 219 64.4
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.0e-65 252.7 193 70.5
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 3.0e-65 252.7 293 50.9
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.9e-65 252.3 195 69.7
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 6.6e-65 251.5 189 69.8
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.5e-64 250.4 195 69.2
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 2.5e-64 249.6 188 69.7
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.3e-64 248.8 192 70.8
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 4.3e-64 248.8 189 70.9
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.3e-63 247.3 192 69.8
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.3e-63 247.3 189 70.4
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 2.1e-63 246.5 189 68.8
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.1e-63 246.5 194 69.1
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.6e-63 245.7 189 68.3
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 6.2e-63 245.0 192 69.8
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 1.1e-62 244.2 225 60.4
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.4e-62 243.8 190 67.4
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.4e-62 243.8 188 69.7
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.4e-62 243.8 234 58.5
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.8e-62 243.4 233 60.1
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.8e-62 243.4 189 69.3
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 4.0e-62 242.3 229 62.0
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.2e-61 240.7 226 60.2
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.2e-61 240.7 192 68.8
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.0e-61 240.0 246 56.1
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.6e-61 239.6 216 62.0
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 2.6e-61 239.6 189 67.2
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.6e-61 239.6 230 60.0
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 9.9e-61 237.7 246 56.1
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 9.9e-61 237.7 242 57.9
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.3e-60 237.3 181 69.6
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.3e-60 237.3 185 67.6
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.9e-60 236.1 243 58.0
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 2.9e-60 236.1 243 54.7
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 4.9e-60 235.3 233 57.5
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 6.4e-60 235.0 235 58.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 8.4e-60 234.6 190 66.8
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.1e-59 234.2 175 68.6
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.4e-59 233.0 191 67.5
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 3.2e-59 232.6 177 70.6
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 3.5e-58 229.2 241 57.3
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.8e-57 226.9 241 55.2
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.3e-57 226.5 223 57.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.3e-57 226.5 223 57.0
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-56 224.2 241 54.8
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.5e-56 223.8 238 55.0
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 3.3e-56 222.6 192 63.0
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 4.3e-56 222.2 175 70.3
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 5.6e-56 221.9 209 57.4
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 9.6e-56 221.1 194 60.3
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.7e-55 219.2 223 56.1
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 4.8e-55 218.8 173 65.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 5.3e-54 215.3 190 61.1
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 2.0e-53 213.4 236 52.5
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.6e-53 213.0 180 63.3
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 3.4e-53 212.6 188 60.1
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 4.5e-53 212.2 246 51.6
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.5e-53 212.2 180 63.3
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 5.8e-53 211.8 189 60.3
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 7.6e-53 211.5 232 52.6
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.3e-52 210.7 186 61.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.7e-52 210.3 189 59.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.9e-52 209.5 152 69.1
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 3.8e-52 209.1 180 62.8
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 4.9e-52 208.8 247 51.8
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 4.9e-52 208.8 247 51.8
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 7.1e-51 204.9 191 59.2
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 9.3e-51 204.5 140 72.1
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.1e-50 203.4 246 49.2
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.1e-50 203.4 190 59.5
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 9.0e-38 161.4 190 51.6
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 8.5e-36 154.8 162 53.1
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 1.6e-34 150.6 101 72.3
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.5e-32 144.1 101 69.3
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 1.8e-30 137.1 202 42.6
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 4.5e-29 132.5 113 64.6
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 3.6e-26 122.9 117 62.4
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.6e-26 122.9 180 42.2
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 6.7e-25 118.6 102 62.7
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 8.8e-25 118.2 154 44.8
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.4e-19 100.9 66 74.2
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.5e-19 100.1 65 78.5
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 4.7e-18 95.9 88 60.2
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 2.3e-17 93.6 85 63.5
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 9.7e-16 88.2 114 41.2
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.4e-14 84.3 119 51.3
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.2e-08 64.7 63 54.0
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 7.5e-08 62.0 77 51.9
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.5e-08 62.0 61 49.2
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.7e-07 60.8 61 54.1


User provided reference genes

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