Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.7e-59 233.0 177 100.0
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.8e-19 100.1 188 48.9
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 3.9e-19 99.0 181 50.3
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 5.1e-19 98.6 174 55.2
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 6.7e-19 98.2 178 43.8
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 6.7e-19 98.2 185 54.6
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.1e-18 97.4 139 43.9
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.5e-18 97.1 181 56.4
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.9e-18 96.7 183 38.3
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.7e-18 95.1 178 41.0
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 7.4e-18 94.7 188 39.9
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 7.4e-18 94.7 177 39.5
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 7.4e-18 94.7 177 39.5
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 7.4e-18 94.7 151 53.6
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 7.4e-18 94.7 177 49.2
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 7.4e-18 94.7 185 54.6
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 7.4e-18 94.7 185 54.6
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 7.4e-18 94.7 178 52.2
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 9.6e-18 94.4 184 54.9
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 9.6e-18 94.4 187 40.6
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.3e-17 94.0 188 38.8
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 1.6e-17 93.6 200 54.5
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.1e-17 93.2 175 56.6
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.8e-17 92.8 182 55.5
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 3.7e-17 92.4 180 38.3
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.7e-17 92.4 177 39.5
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.7e-17 92.4 177 39.5
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.7e-17 92.4 177 39.5
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.8e-17 92.0 192 52.1
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 6.2e-17 91.7 156 51.3
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 8.2e-17 91.3 188 54.8
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 1.1e-16 90.9 187 52.9
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.4e-16 90.5 188 38.8
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.4e-16 90.5 188 38.8
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.4e-16 90.5 157 52.2
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 1.4e-16 90.5 141 61.0
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 1.4e-16 90.5 178 55.1
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.8e-16 90.1 184 50.5
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 1.8e-16 90.1 178 55.1
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 2.4e-16 89.7 187 54.0
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 3.1e-16 89.4 182 53.8
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 4.1e-16 89.0 97 53.6
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 4.1e-16 89.0 97 52.6
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 5.3e-16 88.6 177 55.4
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 6.9e-16 88.2 177 56.5
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 9.0e-16 87.8 185 54.1
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.2e-15 87.4 189 53.4
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.5e-15 87.0 170 52.9
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.5e-15 87.0 170 40.6
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 2.0e-15 86.7 141 59.6
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 3.4e-15 85.9 101 52.5
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 3.4e-15 85.9 180 47.8
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 4.5e-15 85.5 174 55.7
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.8e-15 85.1 150 54.7
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 5.8e-15 85.1 141 61.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 7.6e-15 84.7 182 53.8
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 7.6e-15 84.7 185 57.8
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 1.0e-14 84.3 188 51.6
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 1.0e-14 84.3 135 64.4
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 1.7e-14 83.6 181 50.8
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.7e-14 83.6 178 51.1
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 2.2e-14 83.2 185 62.7
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.2e-14 83.2 178 53.4
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 2.9e-14 82.8 184 55.4
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 3.8e-14 82.4 183 37.2
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.8e-14 82.4 184 52.2
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 3.8e-14 82.4 181 52.5
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 3.8e-14 82.4 189 48.7
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.8e-14 82.4 184 51.6
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.8e-14 82.4 184 51.6
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 3.8e-14 82.4 176 54.0
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 3.8e-14 82.4 176 55.1
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 5.0e-14 82.0 183 48.1
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 5.0e-14 82.0 174 54.6
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 5.0e-14 82.0 135 63.7
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 6.5e-14 81.6 177 37.9
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.5e-14 81.6 190 54.7
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 6.5e-14 81.6 167 55.7
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.1e-13 80.9 181 35.9
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-13 80.9 184 51.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.1e-13 80.9 176 54.0
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.9e-13 80.1 184 44.6
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.9e-13 80.1 184 39.7
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.9e-13 80.1 184 39.7
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 2.5e-13 79.7 90 56.7
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.2e-13 79.3 181 51.9
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 4.2e-13 79.0 125 46.4
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.2e-13 79.0 161 36.6
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.2e-13 79.0 161 36.6
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.5e-13 78.6 139 41.7
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 7.2e-13 78.2 176 51.7
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 9.3e-13 77.8 175 56.0
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 9.3e-13 77.8 189 42.9
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 9.3e-13 77.8 90 81.1
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 2.1e-12 76.6 123 43.9
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-12 76.6 184 38.0
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.1e-12 76.6 176 47.2
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 2.7e-12 76.3 137 40.9
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 3.5e-12 75.9 179 50.3
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.6e-12 75.5 186 53.8
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 6.1e-12 75.1 99 75.8
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 6.1e-12 75.1 92 80.4
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.8e-11 73.6 137 38.7
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.8e-11 73.6 148 53.4
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.3e-11 73.2 91 80.2
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 3.0e-11 72.8 189 49.2
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 3.0e-11 72.8 189 52.9
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.9e-11 72.4 136 39.7
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 3.9e-11 72.4 185 54.1
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 5.1e-11 72.0 185 54.1
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 5.1e-11 72.0 174 37.9
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 6.7e-11 71.6 187 49.7
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 1.1e-10 70.9 170 51.8
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 1.5e-10 70.5 129 43.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.5e-10 70.5 158 49.4
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.5e-10 70.5 174 50.6
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.9e-10 70.1 186 50.5
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.5e-10 69.7 163 52.1
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 5.7e-10 68.6 184 52.2
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 5.7e-10 68.6 182 49.5
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 9.7e-10 67.8 135 38.5
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.6e-09 67.0 129 41.1
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 2.2e-09 66.6 176 48.3
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.8e-09 66.2 83 51.8
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.8e-09 66.2 178 32.6
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.4e-08 63.9 124 52.4
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-08 63.9 158 48.1
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 2.4e-08 63.2 178 36.0
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 3.1e-08 62.8 136 37.5
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 2.6e-07 59.7 121 40.5
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 4.5e-07 58.9 178 51.7
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.9e-07 58.5 92 66.3
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 2.2e-06 56.6 177 30.5


User provided reference genes

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