Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 2.4e-70 268.9 149 100.0
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 5.8e-32 141.4 139 61.2
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 4.0e-25 118.6 133 56.4
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 9.6e-19 97.4 147 49.0
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 3.6e-18 95.5 147 49.0
SalBow5G0592 Salvia bowleyana HOM05D040652 ORTHO05D036958 1.1e-17 94.0 106 56.6
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 1.4e-17 93.6 123 51.2
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 4.0e-17 92.0 133 51.1
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 9.0e-17 90.9 137 46.0
SalBow5G2921 Salvia bowleyana HOM05D040652 ORTHO05D036958 2.6e-16 89.4 106 54.7
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 2.6e-16 89.4 137 45.3
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 4.5e-16 88.6 137 47.4
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 5.8e-16 88.2 139 47.5
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 8.4e-15 84.3 137 40.9
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 5.4e-14 81.6 137 41.6
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 7.1e-14 81.3 154 42.2
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 9.3e-14 80.9 122 47.5
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 1.6e-13 80.1 137 40.9
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 2.1e-13 79.7 139 44.6
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 4.6e-13 78.6 141 42.6
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 6.0e-13 78.2 143 42.7
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 6.0e-13 78.2 132 41.7
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 7.9e-13 77.8 136 39.0
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 3.9e-12 75.5 138 44.2
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 5.1e-12 75.1 122 42.6
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 1.1e-11 73.9 134 38.8
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 1.5e-11 73.6 129 42.6
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.5e-11 73.6 162 38.3
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 5.6e-11 71.6 151 38.4
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 9.6e-11 70.9 164 40.9
unitig_8.g4185 Utricularia gibba HOM05D000357 ORTHO05D009878 1.6e-10 70.1 93 48.4
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 2.1e-10 69.7 159 35.8
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 2.8e-10 69.3 163 37.4
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 2.8e-10 69.3 144 43.1
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 2.8e-10 69.3 166 37.3
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 2.8e-10 69.3 131 40.5
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 2.8e-10 69.3 165 36.4
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 3.7e-10 68.9 143 42.0
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 1.4e-09 67.0 169 35.5
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 3.1e-09 65.9 151 35.8
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 4.0e-09 65.5 154 36.4
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 5.3e-09 65.1 168 35.1
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 9.0e-09 64.3 140 40.7
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 1.2e-08 63.9 158 36.1
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 1.2e-08 63.9 163 37.4
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 2.6e-08 62.8 122 41.8
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 3.4e-08 62.4 160 36.9
Hund05652 Selenicereus undatus HOM05D008121 ORTHO05D009878 4.5e-08 62.0 45 73.3
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 5.8e-08 61.6 145 36.6
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 7.6e-08 61.2 122 40.2
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 7.6e-08 61.2 155 36.1
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 7.6e-08 61.2 163 38.0
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 9.9e-08 60.8 128 42.2
Thhalv10011023m.g Eutrema salsugineum HOM05D011481 ORTHO05D009878 9.9e-08 60.8 125 37.6
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 1.3e-07 60.5 149 38.3
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 1.7e-07 60.1 46 71.7
PGR044G1447 Punica granatum HOM05D011481 ORTHO05D009878 8.4e-07 57.8 135 38.5
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 1.1e-06 57.4 129 40.3
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 1.4e-06 57.0 147 37.4
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 1.4e-06 57.0 139 38.1
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 1.9e-06 56.6 131 37.4
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 1.9e-06 56.6 46 69.6
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 1.9e-06 56.6 146 37.7
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 2.4e-06 56.2 128 36.7
A06p19190 Brassica napus HOM05D011481 ORTHO05D009878 3.2e-06 55.8 132 40.2
BraA06t25002Z Brassica rapa HOM05D011481 ORTHO05D009878 3.2e-06 55.8 132 40.2
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 3.2e-06 55.8 169 32.5
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 4.2e-06 55.5 164 39.0
BcaC07g39334 Brassica carinata HOM05D011481 ORTHO05D009878 5.5e-06 55.1 127 40.2
C08p23500 Brassica napus HOM05D011481 ORTHO05D009878 5.5e-06 55.1 127 40.2
BolC8t49978H Brassica oleracea HOM05D011481 ORTHO05D009878 5.5e-06 55.1 127 40.2
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 5.5e-06 55.1 113 34.5
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 5.5e-06 55.1 86 45.3
Eucgr.K02754 Eucalyptus grandis HOM05D011481 ORTHO05D009878 7.1e-06 54.7 158 36.1
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 9.3e-06 54.3 58 53.4
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 9.3e-06 54.3 58 53.4


User provided reference genes

Program Settings