Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.2e-238 828.6 421 100.0
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.2e-144 515.4 390 67.7
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 3.0e-142 509.2 378 69.3
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 5.6e-141 505.0 382 66.8
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.1e-140 503.1 389 67.4
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.1e-140 503.1 389 67.4
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.1e-140 503.1 382 66.5
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.0e-138 496.5 395 66.8
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.7e-137 493.4 383 64.5
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 2.4e-136 489.6 383 64.8
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.1e-133 480.7 383 62.9
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 4.3e-133 478.8 383 62.9
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 7.4e-133 478.0 414 59.7
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.2e-132 474.9 423 62.4
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 8.2e-132 474.6 382 64.7
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.4e-131 473.8 384 64.1
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.8e-131 473.4 418 61.5
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.2e-130 470.7 417 61.4
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 2.6e-130 469.5 426 59.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 7.6e-130 468.0 387 64.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.0e-129 467.6 407 61.9
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.7e-129 466.8 388 62.1
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 2.2e-129 466.5 387 62.3
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.8e-129 465.7 410 62.0
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.8e-129 465.7 421 60.1
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 4.9e-129 465.3 389 62.5
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 6.5e-129 464.9 432 58.6
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.5e-128 463.0 375 63.5
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 4.2e-128 462.2 377 64.7
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 7.1e-128 461.5 375 64.3
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.3e-128 461.1 378 65.9
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.2e-127 460.7 383 63.4
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 4.6e-127 458.8 382 65.2
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.0e-126 457.6 375 65.6
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.3e-126 457.2 407 59.5
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.8e-126 456.8 386 61.4
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.3e-126 456.4 375 65.3
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.3e-126 456.4 338 69.5
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.3e-125 452.2 375 64.5
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 5.7e-125 451.8 380 61.6
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 7.4e-125 451.4 385 60.3
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.7e-125 451.1 375 62.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 6.3e-124 448.4 381 61.9
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 6.3e-124 448.4 375 62.4
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.1e-123 447.6 397 61.0
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.8e-123 446.8 375 61.3
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.4e-123 446.4 381 61.7
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 3.4e-122 442.6 381 61.2
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 5.9e-122 441.8 389 57.6
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 5.9e-122 441.8 383 57.2
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 5.0e-121 438.7 376 58.5
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 5.0e-121 438.7 377 58.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.0e-118 431.0 374 60.2
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.8e-118 430.3 385 60.0
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.3e-118 429.9 381 59.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 3.9e-118 429.1 375 58.9
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 6.7e-118 428.3 375 58.7
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.5e-117 426.4 405 55.8
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.9e-113 412.9 345 62.0
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.7e-108 397.1 384 53.1
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 3.7e-108 396.0 415 52.5
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 4.8e-108 395.6 417 52.0
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 8.2e-108 394.8 417 52.3
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 1.4e-107 394.0 398 53.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.8e-107 393.7 393 52.7
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 6.9e-107 391.7 377 55.2
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.5e-106 390.6 403 53.1
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.0e-105 387.9 417 51.3
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.0e-105 387.9 417 51.3
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.3e-105 387.5 403 52.9
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 3.8e-105 386.0 419 50.1
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 3.8e-105 386.0 383 53.0
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 6.5e-105 385.2 395 52.4
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.4e-104 384.0 385 52.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.1e-101 374.4 423 51.1
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 7.7e-98 361.7 309 59.5
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.5e-93 347.4 365 52.3
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.5e-93 345.1 393 48.9
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.2e-92 343.6 394 48.7
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.0e-87 325.1 299 55.2
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 4.8e-84 315.8 396 43.9
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.4e-83 314.3 284 60.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.7e-81 307.4 265 63.0
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.5e-80 303.5 315 50.2
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.5e-77 294.3 380 43.4
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.4e-77 293.1 371 42.6
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 4.9e-76 289.3 361 44.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.8e-70 270.8 416 39.7
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 9.2e-67 258.5 402 39.3
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.3e-64 250.0 305 47.9
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 9.8e-61 238.4 315 42.5
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.4e-59 233.8 199 58.8
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.3e-56 223.4 374 38.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.6e-50 204.5 595 27.9
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 1.2e-47 194.9 223 45.7
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 4.7e-39 166.4 249 37.3
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.8e-36 156.8 116 65.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 6.0e-34 149.4 134 59.7
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 6.6e-33 146.0 130 56.9
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 4.2e-27 126.7 135 48.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 2.5e-24 117.5 347 29.1
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 5.6e-24 116.3 99 60.6
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.0e-22 110.2 82 69.5
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.8e-21 106.3 77 67.5
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 5.8e-21 106.3 78 64.1
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 5.5e-19 99.8 77 67.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 7.4e-16 89.4 82 51.2
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.0e-12 79.0 63 66.7
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.2e-10 72.0 54 64.8
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.9e-08 64.7 98 44.9
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.3e-07 62.0 37 78.4
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.2e-07 61.2 61 55.7
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 6.3e-07 59.7 98 40.8
CAN.G1376.1 Capsicum annuum HOM05D004980 ORTHO05D021411 3.1e-06 57.4 138 32.6


User provided reference genes

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