Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.5e-104 382.9 193 100.0
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 7.2e-59 231.1 203 64.5
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 7.7e-53 211.1 200 59.5
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 1.5e-51 206.8 199 59.8
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 5.7e-48 194.9 181 59.7
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 5.7e-48 194.9 175 62.3
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 7.5e-48 194.5 187 58.3
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.7e-47 192.2 197 56.9
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 8.3e-47 191.0 181 59.7
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 3.1e-46 189.1 203 54.7
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.1e-46 189.1 197 56.3
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 1.6e-45 186.8 193 54.9
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.6e-45 186.8 168 60.1
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 2.0e-45 186.4 172 59.3
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 7.7e-45 184.5 167 60.5
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.3e-44 183.7 159 62.3
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.7e-44 183.3 187 57.2
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 2.9e-44 182.6 155 63.9
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.9e-44 182.6 162 59.9
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.9e-43 179.9 168 60.7
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.9e-43 179.9 168 59.5
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.9e-43 179.9 192 54.7
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 2.5e-43 179.5 185 55.7
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 3.2e-43 179.1 249 48.2
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 4.2e-43 178.7 176 59.1
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 4.2e-43 178.7 185 54.1
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 5.5e-43 178.3 161 61.5
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.2e-42 177.2 169 59.8
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 2.7e-42 176.0 207 52.7
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 2.7e-42 176.0 187 55.1
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 8.0e-42 174.5 189 55.0
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 8.0e-42 174.5 167 58.7
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.0e-41 174.1 168 58.9
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.0e-41 174.1 211 53.1
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 1.4e-41 173.7 161 60.2
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 2.3e-41 172.9 217 53.5
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 2.3e-41 172.9 146 61.0
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 3.0e-41 172.6 113 73.5
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 4.0e-41 172.2 211 52.6
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 4.0e-41 172.2 153 58.8
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 4.0e-41 172.2 192 53.1
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 6.8e-41 171.4 195 52.3
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 6.8e-41 171.4 191 52.9
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 8.8e-41 171.0 199 52.8
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.2e-40 170.6 173 54.9
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.2e-40 170.6 191 52.4
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.5e-40 170.2 147 59.2
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 1.5e-40 170.2 208 51.9
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.5e-40 170.2 211 50.2
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 2.0e-40 169.9 162 58.0
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 4.4e-40 168.7 153 55.6
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 5.7e-40 168.3 205 49.8
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 5.7e-40 168.3 171 57.3
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 7.5e-40 167.9 206 51.5
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.8e-40 167.5 138 60.1
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-39 167.2 138 59.4
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.7e-39 166.8 210 49.5
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.2e-39 166.4 150 59.3
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.7e-39 165.6 138 59.4
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.7e-39 165.6 138 59.4
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 3.7e-39 165.6 203 49.3
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.4e-38 162.9 152 58.6
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.1e-38 162.5 179 52.0
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 5.4e-38 161.8 148 56.8
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 9.1e-38 161.0 166 53.0
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 2.0e-37 159.8 220 50.0
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 2.7e-37 159.5 220 50.5
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 2.7e-37 159.5 145 56.6
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 4.5e-37 158.7 138 58.0
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.5e-37 158.7 138 58.0
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 4.5e-37 158.7 203 48.3
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 7.7e-37 157.9 223 48.4
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.0e-36 157.5 201 52.7
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 3.8e-36 155.6 188 54.3
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 3.8e-36 155.6 188 54.3
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 3.8e-36 155.6 188 54.3
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 3.8e-36 155.6 175 49.7
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 3.8e-36 155.6 193 46.6
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 5.0e-36 155.2 190 53.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 5.0e-36 155.2 190 53.2
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 5.0e-36 155.2 153 53.6
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.5e-35 153.7 188 53.7
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 2.5e-35 152.9 191 53.4
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 3.3e-35 152.5 208 49.5
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 4.2e-35 152.1 217 48.4
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 5.5e-35 151.8 226 44.7
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 7.2e-35 151.4 128 58.6
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 4.7e-34 148.7 223 47.5
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 4.0e-33 145.6 201 49.8
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 4.0e-33 145.6 165 50.9
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 4.0e-33 145.6 222 47.7
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 6.8e-33 144.8 200 48.5
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 8.9e-33 144.4 98 72.4
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 8.9e-33 144.4 98 72.4
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 8.9e-33 144.4 98 72.4
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.5e-32 143.7 199 47.2
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 2.0e-32 143.3 198 50.0
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 7.5e-32 141.4 165 48.5
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 7.5e-32 141.4 92 72.8
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 7.5e-32 141.4 92 72.8
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 9.8e-32 141.0 201 48.8
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 4.9e-31 138.7 137 54.7
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 1.2e-29 134.0 94 68.1
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 2.0e-29 133.3 94 69.1
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 4.6e-29 132.1 174 50.6
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 1.0e-28 131.0 96 62.5
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.1e-26 121.7 136 52.2
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 5.2e-25 118.6 192 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.5e-24 117.1 129 49.6
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 9.8e-24 114.4 97 58.8
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.9e-23 112.8 164 39.6
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.2e-22 109.4 115 47.8
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 4.1e-22 109.0 162 38.9
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 4.6e-21 105.5 86 54.7
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 5.6e-19 98.6 102 45.1
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 7.3e-19 98.2 162 37.0
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.8e-17 93.6 67 79.1
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.3e-17 93.2 161 44.1
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 3.1e-17 92.8 141 44.7
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 6.8e-17 91.7 161 46.6
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 7.5e-16 88.2 124 41.9
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 7.5e-16 88.2 124 41.9
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 7.1e-14 81.6 41 82.9
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 3.5e-13 79.3 111 45.0
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 5.2e-09 65.5 73 42.5
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 5.8e-08 62.0 38 68.4
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 5.8e-08 62.0 141 30.5
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 9.9e-08 61.2 65 52.3
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.3e-07 60.8 136 33.1
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 2.9e-07 59.7 105 34.3
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 6.4e-07 58.5 172 29.7
A05p27070 Brassica napus HOM05D005829 ORTHO05D007246 3.2e-06 56.2 46 58.7
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 3.2e-06 56.2 112 31.2


User provided reference genes

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