Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00368 Erythranthe guttata HOM05D003325 ORTHO05D003852 4.1e-93 344.7 176 100.0
Migut.N02143 Erythranthe guttata HOM05D003325 ORTHO05D003852 3.0e-51 205.7 170 65.9
Migut.N02169 Erythranthe guttata HOM05D003325 ORTHO05D003852 1.2e-49 200.3 169 65.1
MSTRG.11269 Avicennia marina HOM05D003325 ORTHO05D003852 1.1e-48 197.2 166 65.1
Migut.I00547 Erythranthe guttata HOM05D003325 ORTHO05D003852 6.8e-48 194.5 166 63.3
SGA_v2.0_scaffold383G50423 Striga asiatica HOM05D003325 ORTHO05D003852 1.9e-42 176.4 153 65.4
Dinv23165 Davidia involucrata HOM05D003325 ORTHO05D003852 9.9e-39 164.1 164 53.7
SalBow5G0035 Salvia bowleyana HOM05D003325 ORTHO05D003852 1.9e-37 159.8 185 50.3
Hma1.2p1_0014F.1_g009260 Hydrangea macrophylla HOM05D003325 ORTHO05D003852 2.7e-36 156.0 157 53.5
Glyma.04G196900 Glycine max HOM05D003325 ORTHO05D003852 7.8e-36 154.5 154 52.6
Oeu061142.1 Olea europaea HOM05D003325 ORTHO05D003852 7.8e-36 154.5 195 49.2
Cc01_g02380 Coffea canephora HOM05D003325 ORTHO05D003852 1.3e-35 153.7 159 54.7
Migut.O00357 Erythranthe guttata HOM05D003325 ORTHO05D003852 3.0e-35 152.5 145 57.2
TAR622G0641 Trochodendron aralioides HOM05D003325 ORTHO05D003852 3.0e-35 152.5 157 51.0
CANSAT80G0326 Cannabis sativa HOM05D003325 ORTHO05D003852 3.9e-35 152.1 169 50.9
CANSAT80G2651 Cannabis sativa HOM05D003325 ORTHO05D003852 3.9e-35 152.1 169 50.9
HanXRQChr02g0034321 Helianthus annuus HOM05D003325 ORTHO05D003852 3.9e-35 152.1 159 53.5
Lalb_Chr08g0237261 Lupinus albus HOM05D003325 ORTHO05D003852 3.9e-35 152.1 154 53.2
Phvul.009G165200 Phaseolus vulgaris HOM05D003325 ORTHO05D003852 3.9e-35 152.1 154 51.9
Psat5g052120 Pisum sativum HOM05D003325 ORTHO05D003852 3.9e-35 152.1 164 51.8
VMungo1309G1507 Vigna mungo HOM05D003325 ORTHO05D003852 5.1e-35 151.8 154 51.9
arahy.Tifrunner.gnm1.ann1.C4UAPE Arachis hypogaea HOM05D003325 ORTHO05D003852 8.6e-35 151.0 175 45.7
arahy.Tifrunner.gnm1.ann1.XMC2I2 Arachis hypogaea HOM05D003325 ORTHO05D003852 1.1e-34 150.6 175 45.1
CSS0012678 Camellia sinensis var. sinensis HOM05D003325 ORTHO05D003852 1.1e-34 150.6 166 51.2
Glyma.06G168700 Glycine max HOM05D003325 ORTHO05D003852 1.5e-34 150.2 154 51.3
Duzib205G1086 Durio zibethinus HOM05D003325 ORTHO05D003852 2.5e-34 149.4 157 52.2
Lj5A94T49 Lonicera japonica HOM05D003325 ORTHO05D003852 2.5e-34 149.4 156 52.6
HanXRQChr13g0407901 Helianthus annuus HOM05D003325 ORTHO05D003852 9.5e-34 147.5 157 51.6
Lj1g0000526 Lotus japonicus HOM05D003325 ORTHO05D003852 9.5e-34 147.5 157 50.3
PGSC0003DMG400027287 Solanum tuberosum HOM05D003325 ORTHO05D003852 9.5e-34 147.5 165 49.1
Ca_16056_v3 Cicer arietinum L. HOM05D003325 ORTHO05D003852 1.2e-33 147.1 166 48.8
Duzib068G1443 Durio zibethinus HOM05D003325 ORTHO05D003852 1.6e-33 146.7 149 51.0
MD14G1155200 Malus domestica HOM05D003325 ORTHO05D003852 2.1e-33 146.4 163 47.2
Atru.chr6.1822 Acer truncatum HOM05D003325 ORTHO05D003852 4.7e-33 145.2 152 50.7
COL.COLO4_07120 Corchorus olitorius HOM05D003325 ORTHO05D003852 4.7e-33 145.2 145 51.7
Prupe.5G149200 Prunus persica HOM05D003325 ORTHO05D003852 4.7e-33 145.2 161 48.4
Solyc10g080020.3 Solanum lycopersicum HOM05D003325 ORTHO05D003852 4.7e-33 145.2 158 50.6
Sopen10g030630 Solanum pennellii HOM05D003325 ORTHO05D003852 6.2e-33 144.8 158 50.6
Medtr3g099090 Medicago truncatula HOM05D003325 ORTHO05D003852 8.1e-33 144.4 157 49.7
Thecc.03G131500 Theobroma cacao HOM05D003325 ORTHO05D003852 8.1e-33 144.4 158 48.1
PGSC0003DMG400023730 Solanum tuberosum HOM05D003325 ORTHO05D003852 1.1e-32 144.1 158 49.4
Migut.K00759 Erythranthe guttata HOM05D003325 ORTHO05D003852 1.4e-32 143.7 145 55.9
CiPaw.11G005500 Carya illinoinensis HOM05D003325 ORTHO05D003852 3.1e-32 142.5 162 50.0
Cfa018776 Carpinus fangiana HOM05D003325 ORTHO05D003852 4.0e-32 142.1 157 50.3
Haze_07162 Corylus avellana HOM05D003325 ORTHO05D003852 4.0e-32 142.1 157 50.3
QL03p041468 Quercus lobata HOM05D003325 ORTHO05D003852 4.0e-32 142.1 158 51.3
Lj1g0016208 Lotus japonicus HOM05D003325 ORTHO05D003852 5.2e-32 141.7 148 51.4
Hund10145 Selenicereus undatus HOM05D003325 ORTHO05D003852 5.2e-32 141.7 154 51.9
HanXRQChr13g0407891 Helianthus annuus HOM05D003325 ORTHO05D003852 6.8e-32 141.4 155 52.3
Lsat_1_v5_gn_1_33020 Lactuca sativa HOM05D003325 ORTHO05D003852 8.9e-32 141.0 162 46.3
Thecc.03G131600 Theobroma cacao HOM05D003325 ORTHO05D003852 8.9e-32 141.0 158 50.0
Gohir.D03G113900 Gossypium hirsutum HOM05D003325 ORTHO05D003852 1.2e-31 140.6 148 50.7
Gorai.003G120100 Gossypium raimondii HOM05D003325 ORTHO05D003852 1.2e-31 140.6 148 50.7
TWI39G0380 Tripterygium wilfordii HOM05D003325 ORTHO05D003852 1.2e-31 140.6 150 53.3
Gohir.A03G053200 Gossypium hirsutum HOM05D003325 ORTHO05D003852 2.0e-31 139.8 148 50.0
EL10Ac5g11389 Beta vulgaris HOM05D003325 ORTHO05D003852 3.4e-31 139.0 154 52.6
QL10p002570 Quercus lobata HOM05D003325 ORTHO05D003852 4.4e-31 138.7 150 50.0
Potri.012G100500 Populus trichocarpa HOM05D003325 ORTHO05D003852 5.8e-31 138.3 173 47.4
Sopen04g008210 Solanum pennellii HOM05D003325 ORTHO05D003852 5.8e-31 138.3 161 49.1
MBI11_g22691_MAGBIO Magnolia biondii HOM05D003325 ORTHO05D003852 7.6e-31 137.9 172 45.3
Solyc04g016160.4 Solanum lycopersicum HOM05D003325 ORTHO05D003852 7.6e-31 137.9 155 49.7
Gohir.A03G053300 Gossypium hirsutum HOM05D003325 ORTHO05D003852 9.9e-31 137.5 155 47.7
Gohir.D03G113600 Gossypium hirsutum HOM05D003325 ORTHO05D003852 9.9e-31 137.5 155 47.7
Gorai.003G119900 Gossypium raimondii HOM05D003325 ORTHO05D003852 9.9e-31 137.5 155 47.7
HanXRQChr13g0408781 Helianthus annuus HOM05D003325 ORTHO05D003852 1.7e-30 136.7 167 45.5
QL10p002524 Quercus lobata HOM05D003325 ORTHO05D003852 1.7e-30 136.7 158 48.7
Sc10g0010520 Simmondsia chinensis HOM05D003325 ORTHO05D003852 1.7e-30 136.7 146 52.7
Ciclev10033680m.g Citrus clementina HOM05D003325 ORTHO05D003852 2.9e-30 136.0 160 48.8
Duzib084G0716 Durio zibethinus HOM05D003325 ORTHO05D003852 2.9e-30 136.0 155 49.7
Solyc04g016130.3 Solanum lycopersicum HOM05D003325 ORTHO05D003852 2.9e-30 136.0 156 48.1
Sopen04g008200 Solanum pennellii HOM05D003325 ORTHO05D003852 2.9e-30 136.0 156 48.1
GSVIVG01008557001 Vitis vinifera HOM05D003325 ORTHO05D003852 6.4e-30 134.8 151 49.0
HanXRQChr00c0029g0571191 Helianthus annuus HOM05D003325 ORTHO05D003852 8.4e-30 134.4 145 48.3
Nitab4.5_0012330g0020 Nicotiana tabacum HOM05D003325 ORTHO05D003852 1.1e-29 134.0 155 49.0
PGSC0003DMG400038085 Solanum tuberosum HOM05D003325 ORTHO05D003852 1.1e-29 134.0 176 44.3
DCAR_016380 Daucus carota HOM05D003325 ORTHO05D003852 1.4e-29 133.7 187 43.3
Potri.011G010200 Populus trichocarpa HOM05D003325 ORTHO05D003852 1.4e-29 133.7 151 51.7
Cpa.g.sc13.92 Carica papaya HOM05D003325 ORTHO05D003852 3.2e-29 132.5 155 46.5
HanXRQChr13g0407821 Helianthus annuus HOM05D003325 ORTHO05D003852 4.1e-29 132.1 155 47.7
Potri.015G098700 Populus trichocarpa HOM05D003325 ORTHO05D003852 5.4e-29 131.7 157 51.6
RcHm_v2.0_Chr7g0189831 Rosa chinensis HOM05D003325 ORTHO05D003852 7.1e-29 131.3 157 46.5
Manes.06G120800 Manihot esculenta HOM05D003325 ORTHO05D003852 9.2e-29 131.0 155 51.0
Potri.012G100600 Populus trichocarpa HOM05D003325 ORTHO05D003852 1.2e-28 130.6 150 48.7
CAN.G676.19 Capsicum annuum HOM05D003325 ORTHO05D003852 1.6e-28 130.2 155 46.5
Sabra12G0073800 Salix brachista HOM05D003325 ORTHO05D003852 1.6e-28 130.2 173 46.8
COL.COLO4_07119 Corchorus olitorius HOM05D003325 ORTHO05D003852 2.1e-28 129.8 152 47.4
Potri.015G098800 Populus trichocarpa HOM05D003325 ORTHO05D003852 2.7e-28 129.4 151 48.3
Sabra12G0073900 Salix brachista HOM05D003325 ORTHO05D003852 2.7e-28 129.4 157 47.1
TWI14G0714 Tripterygium wilfordii HOM05D003325 ORTHO05D003852 2.7e-28 129.4 147 46.9
Manes.06G120900 Manihot esculenta HOM05D003325 ORTHO05D003852 3.5e-28 129.0 156 47.4
QL10p002543 Quercus lobata HOM05D003325 ORTHO05D003852 3.5e-28 129.0 160 45.0
Actinidia25563 Actinidia chinensis HOM05D003325 ORTHO05D003852 4.6e-28 128.6 135 52.6
Eucgr.F00440 Eucalyptus grandis HOM05D003325 ORTHO05D003852 6.0e-28 128.3 157 44.6
Sc10g0010530 Simmondsia chinensis HOM05D003325 ORTHO05D003852 6.0e-28 128.3 151 49.0
Aa31LG1G18420 Aethionema arabicum HOM05D003325 ORTHO05D003852 1.0e-27 127.5 163 45.4
ECA247G1358 Erigeron canadensis HOM05D003325 ORTHO05D003852 1.0e-27 127.5 157 43.9
Carub.0008s2425 Capsella rubella HOM05D003325 ORTHO05D003852 1.7e-27 126.7 162 45.7
DCAR_021633 Daucus carota HOM05D003325 ORTHO05D003852 1.7e-27 126.7 171 45.0
Eucgr.B00095 Eucalyptus grandis HOM05D003325 ORTHO05D003852 1.7e-27 126.7 154 46.1
QL03p041488 Quercus lobata HOM05D003325 ORTHO05D003852 1.7e-27 126.7 159 48.4
Oeu061143.2 Olea europaea HOM05D003325 ORTHO05D003852 2.3e-27 126.3 204 42.2
Rhsim08G0191500 Rhododendron simsii HOM05D003325 ORTHO05D003852 2.3e-27 126.3 157 45.2
Cpa.g.sc4.169 Carica papaya HOM05D003325 ORTHO05D003852 3.9e-27 125.6 153 50.3
Potri.011G010100 Populus trichocarpa HOM05D003325 ORTHO05D003852 3.9e-27 125.6 152 49.3
A02p42850 Brassica napus HOM05D003325 ORTHO05D003852 5.1e-27 125.2 157 43.3
HanXRQChr02g0034341 Helianthus annuus HOM05D003325 ORTHO05D003852 5.1e-27 125.2 142 50.7
AL8G40600 Arabidopsis lyrata HOM05D003325 ORTHO05D003852 8.7e-27 124.4 166 44.0
Thhalv10004048m.g Eutrema salsugineum HOM05D003325 ORTHO05D003852 1.1e-26 124.0 162 42.6
BcaC03g18211 Brassica carinata HOM05D003325 ORTHO05D003852 1.5e-26 123.6 157 43.9
C02p62780 Brassica napus HOM05D003325 ORTHO05D003852 1.5e-26 123.6 157 43.9
BcaB07g29692 Brassica carinata HOM05D003325 ORTHO05D003852 1.9e-26 123.2 161 42.2
FAN13G2783 Fragaria x ananassa HOM05D003325 ORTHO05D003852 1.9e-26 123.2 157 45.2
HanXRQChr10g0317761 Helianthus annuus HOM05D003325 ORTHO05D003852 1.9e-26 123.2 192 42.2
vmacro19124 Vaccinium macrocarpon HOM05D003325 ORTHO05D003852 2.5e-26 122.9 169 43.2
CDE06G2031 Ceratophyllum demersum HOM05D003325 ORTHO05D003852 3.3e-26 122.5 150 44.0
FAN04G0895 Fragaria x ananassa HOM05D003325 ORTHO05D003852 3.3e-26 122.5 157 45.2
FvH4_5g08560 Fragaria vesca HOM05D003325 ORTHO05D003852 4.3e-26 122.1 157 44.6
FAN18G4277 Fragaria x ananassa HOM05D003325 ORTHO05D003852 4.3e-26 122.1 157 44.6
Sp2g26610 Schrenkiella parvula HOM05D003325 ORTHO05D003852 4.3e-26 122.1 164 42.7
FAN08G2527 Fragaria x ananassa HOM05D003325 ORTHO05D003852 1.6e-25 120.2 165 43.0
Potri.004G005700 Populus trichocarpa HOM05D003325 ORTHO05D003852 1.6e-25 120.2 150 48.7
THA.LOC104798940 Tarenaya hassleriana HOM05D003325 ORTHO05D003852 2.1e-25 119.8 180 36.7
AUR62038854 Chenopodium quinoa HOM05D003325 ORTHO05D003852 2.8e-25 119.4 118 56.8
AT5G63520 Arabidopsis thaliana HOM05D003325 ORTHO05D003852 3.6e-25 119.0 170 41.8
CARHR277380 Cardamine hirsuta HOM05D003325 ORTHO05D003852 3.6e-25 119.0 160 45.6
PGR083G0510 Punica granatum HOM05D003325 ORTHO05D003852 3.6e-25 119.0 154 44.2
ATR0561G074 Amborella trichopoda HOM05D003325 ORTHO05D003852 4.7e-25 118.6 152 39.5
BraA02t09207Z Brassica rapa HOM05D003325 ORTHO05D003852 8.1e-25 117.9 160 41.9
THA.LOC104798939 Tarenaya hassleriana HOM05D003325 ORTHO05D003852 8.1e-25 117.9 147 46.3
HanXRQChr13g0408811 Helianthus annuus HOM05D003325 ORTHO05D003852 1.8e-24 116.7 146 46.6
BolC2t12350H Brassica oleracea HOM05D003325 ORTHO05D003852 2.4e-24 116.3 160 41.9
HanXRQChr13g0408791 Helianthus annuus HOM05D003325 ORTHO05D003852 6.9e-24 114.8 178 43.8
ATR0561G042 Amborella trichopoda HOM05D003325 ORTHO05D003852 1.5e-23 113.6 155 39.4
HanXRQChr13g0408761 Helianthus annuus HOM05D003325 ORTHO05D003852 4.4e-23 112.1 123 50.4
HanXRQChr13g0407851 Helianthus annuus HOM05D003325 ORTHO05D003852 1.3e-22 110.5 172 41.9
DCAR_021631 Daucus carota HOM05D003325 ORTHO05D003852 2.2e-22 109.8 174 41.4
HanXRQChr04g0099651 Helianthus annuus HOM05D003325 ORTHO05D003852 2.2e-22 109.8 210 37.6
Prupe.5G149100 Prunus persica HOM05D003325 ORTHO05D003852 2.9e-22 109.4 151 43.7
HanXRQChr13g0408751 Helianthus annuus HOM05D003325 ORTHO05D003852 1.1e-21 107.5 130 47.7
Thhalv10004000m.g Eutrema salsugineum HOM05D003325 ORTHO05D003852 3.2e-21 105.9 153 40.5
A06p30150 Brassica napus HOM05D003325 ORTHO05D003852 3.5e-20 102.4 153 37.9
BraA06t25966Z Brassica rapa HOM05D003325 ORTHO05D003852 3.5e-20 102.4 153 37.9
BolC3t18546H Brassica oleracea HOM05D003325 ORTHO05D003852 6.0e-20 101.7 153 37.3
Peaxi162Scf00130g00520 Petunia axillaris HOM05D003325 ORTHO05D003852 7.8e-20 101.3 155 41.9
BcaC01g06930 Brassica carinata HOM05D003325 ORTHO05D003852 1.0e-19 100.9 153 37.3
C03p62920 Brassica napus HOM05D003325 ORTHO05D003852 1.0e-19 100.9 153 37.3
BcaB02g09754 Brassica carinata HOM05D003325 ORTHO05D003852 1.7e-19 100.1 152 36.8
TAR622G0196 Trochodendron aralioides HOM05D003325 ORTHO05D003852 3.9e-19 99.0 84 58.3
MD06G1139200 Malus domestica HOM05D003325 ORTHO05D003852 5.1e-19 98.6 161 38.5
FAN18G2108 Fragaria x ananassa HOM05D003325 ORTHO05D003852 6.6e-19 98.2 164 36.0
FvH4_5g08570 Fragaria vesca HOM05D003325 ORTHO05D003852 8.7e-19 97.8 164 36.0
MD14G1155100 Malus domestica HOM05D003325 ORTHO05D003852 8.7e-19 97.8 118 45.8
FAN04G2439 Fragaria x ananassa HOM05D003325 ORTHO05D003852 1.5e-18 97.1 168 35.1
MD06G1139500 Malus domestica HOM05D003325 ORTHO05D003852 1.9e-18 96.7 93 53.8
ClCG03G003870 Citrullus lanatus HOM05D003325 ORTHO05D003852 7.3e-18 94.7 80 61.2
Ciclev10031319m.g Citrus clementina HOM05D003325 ORTHO05D003852 9.6e-18 94.4 152 39.5
DCAR_021629 Daucus carota HOM05D003325 ORTHO05D003852 1.3e-17 94.0 144 41.0
ATR0561G235 Amborella trichopoda HOM05D003325 ORTHO05D003852 5.8e-15 85.1 92 47.8
Aqoxy1G03157 Aquilegia oxysepala HOM05D003325 ORTHO05D003852 2.4e-13 79.7 69 60.9
Aqoxy1G03342 Aquilegia oxysepala HOM05D003325 ORTHO05D003852 2.4e-13 79.7 69 60.9
Aqoxy2G00205 Aquilegia oxysepala HOM05D003325 ORTHO05D003852 5.4e-13 78.6 69 60.9
HanXRQChr04g0099631 Helianthus annuus HOM05D003325 ORTHO05D003852 4.8e-09 65.5 110 40.0
Mapoly0019s0043 Marchantia polymorpha HOM05D003325 ORTHO05D003852 1.8e-08 63.5 147 29.3
AL3G40400 Arabidopsis lyrata HOM05D003325 ORTHO05D003852 3.1e-08 62.8 81 43.2
AUR62029583 Chenopodium quinoa HOM05D003325 ORTHO05D003852 6.9e-08 61.6 162 32.1
SEGI_12810 Sequoiadendron giganteum HOM05D003325 ORTHO05D003852 6.9e-08 61.6 98 31.6
Sed0021268 Sechium edule HOM05D003325 ORTHO05D003852 1.5e-07 60.5 74 45.9
Nitab4.5_0007721g0020 Nicotiana tabacum HOM05D003325 ORTHO05D003852 8.4e-06 54.7 72 40.3


User provided reference genes

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