Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.8e-60 235.7 117 100.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.8e-47 191.4 103 92.2
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 9.4e-46 186.8 103 89.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.7e-45 184.5 103 85.4
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.0e-44 183.3 103 87.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.2e-43 179.9 102 85.3
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 3.1e-41 171.8 107 79.4
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 5.4e-41 171.0 101 81.2
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.2e-40 169.9 101 82.2
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.7e-40 168.7 101 80.2
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.7e-40 168.7 101 80.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 3.3e-38 161.8 101 80.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.7e-37 157.9 101 79.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.8e-36 156.0 102 79.4
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.3e-36 155.6 99 79.8
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.0e-36 154.8 93 81.7
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 8.9e-36 153.7 102 77.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.2e-35 153.3 102 78.4
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.2e-35 153.3 94 79.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.4e-35 151.8 102 78.4
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 3.4e-35 151.8 102 76.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 4.4e-35 151.4 102 77.5
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 4.4e-35 151.4 99 78.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 4.4e-35 151.4 102 77.5
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 4.4e-35 151.4 102 71.6
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 4.4e-35 151.4 102 77.5
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 5.7e-35 151.0 102 76.5
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 5.7e-35 151.0 103 67.0
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 5.7e-35 151.0 92 79.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 5.7e-35 151.0 95 77.9
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 7.5e-35 150.6 102 70.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 9.8e-35 150.2 93 77.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 9.8e-35 150.2 82 89.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 9.8e-35 150.2 102 70.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.7e-34 149.4 101 76.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.2e-34 149.1 101 76.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.2e-34 149.1 92 79.3
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.8e-34 148.7 102 75.5
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.8e-34 148.7 95 76.8
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 3.7e-34 148.3 102 73.5
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 3.7e-34 148.3 102 73.5
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 3.7e-34 148.3 102 73.5
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.9e-34 147.9 92 78.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 4.9e-34 147.9 102 69.6
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 6.3e-34 147.5 92 77.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 8.3e-34 147.1 101 73.3
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.1e-33 146.7 101 75.2
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.1e-33 146.7 98 71.4
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.4e-33 146.4 92 77.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.4e-33 146.4 103 68.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.8e-33 146.0 91 79.1
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.8e-33 146.0 98 71.4
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 3.1e-33 145.2 92 77.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 3.1e-33 145.2 88 81.8
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 4.1e-33 144.8 92 77.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 4.1e-33 144.8 103 67.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.1e-33 144.8 98 71.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 5.4e-33 144.4 89 79.8
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.4e-33 144.4 92 75.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 7.0e-33 144.1 91 75.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 7.0e-33 144.1 92 75.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 9.2e-33 143.7 92 76.1
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 9.2e-33 143.7 92 76.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.6e-32 142.9 92 76.1
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.6e-32 142.9 92 76.1
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.6e-32 142.9 92 76.1
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.7e-32 142.1 103 69.9
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 2.7e-32 142.1 98 68.4
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 2.7e-32 142.1 98 68.4
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.5e-32 141.7 98 68.4
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.5e-32 141.7 99 70.7
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 4.5e-32 141.4 99 72.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.8e-32 140.6 101 66.3
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.8e-32 140.6 100 69.0
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.0e-31 140.2 103 71.8
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 1.0e-31 140.2 91 74.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.3e-31 139.8 92 72.8
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.3e-31 139.8 97 71.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.3e-31 139.0 92 71.7
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.3e-31 139.0 102 66.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 2.3e-31 139.0 84 79.8
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.3e-31 139.0 93 72.0
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.8e-31 138.3 92 71.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.3e-30 135.2 78 83.3
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.3e-30 135.2 88 69.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.6e-30 134.4 91 70.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 8.0e-29 130.6 92 68.5
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.0e-28 128.6 90 67.8
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 5.2e-28 127.9 80 75.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.0e-27 125.9 124 54.8
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.6e-27 125.6 146 52.7
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 2.6e-27 125.6 81 74.1
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.7e-26 122.9 92 63.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 2.2e-26 122.5 80 72.5
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.7e-26 121.7 87 66.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.7e-26 121.7 80 75.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 8.3e-26 120.6 79 75.9
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.4e-25 119.0 91 60.4
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.7e-24 115.5 80 66.2
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.8e-24 114.0 82 72.0
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.7e-23 112.8 87 60.9
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.3e-23 112.5 89 64.0
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.6e-23 110.9 77 75.3
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 4.7e-21 104.8 78 67.9
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.1e-20 103.6 74 64.9
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.4e-20 103.2 99 50.5
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.7e-18 96.3 59 83.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.7e-18 96.3 91 47.3
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.9e-18 94.7 88 59.1
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 9.2e-17 90.5 60 78.3
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.6e-16 89.7 71 62.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 5.6e-14 81.3 46 87.0
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 8.3e-10 67.4 48 70.8
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.2e-09 65.5 46 67.4
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.8e-08 60.8 45 62.2
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.6e-07 57.4 45 57.8


User provided reference genes

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