Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00290 Erythranthe guttata HOM05D001033 ORTHO05D004888 5.5e-52 207.2 96 100.0
Migut.I00284 Erythranthe guttata HOM05D001033 ORTHO05D004888 2.7e-51 204.9 96 99.0
Migut.I00294 Erythranthe guttata HOM05D001033 ORTHO05D004888 2.7e-51 204.9 96 99.0
Migut.I00279 Erythranthe guttata HOM05D001033 ORTHO05D004888 2.3e-37 158.7 96 82.3
Migut.D01428 Erythranthe guttata HOM05D001033 ORTHO05D002045 8.0e-27 123.6 59 98.3
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 2.4e-23 112.1 59 88.1
Solyc00g500062.1 Solanum lycopersicum HOM05D001033 ORTHO05D002045 3.5e-22 108.2 59 84.7
Oeu012835.1 Olea europaea HOM05D001033 ORTHO05D002045 6.0e-22 107.5 58 82.8
Solyc06g036210.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 2.3e-21 105.5 59 81.4
CAN.G219.26 Capsicum annuum HOM05D001033 ORTHO05D002045 5.1e-21 104.4 58 82.8
Dinv29306 Davidia involucrata HOM05D000680 ORTHO05D000738 8.6e-21 103.6 59 81.4
Oeu003950.1 Olea europaea HOM05D001033 ORTHO05D002045 8.6e-21 103.6 58 82.8
PGR111G0012 Punica granatum HOM05D001033 ORTHO05D002045 8.6e-21 103.6 59 81.4
HanXRQChr00c0345g0573901 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr01g0020401 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr10g0300281 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 81.4
Nn021s41547 Nelumbo nucifera HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 79.7
Nn071s42393 Nelumbo nucifera HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 79.7
Potri.013G163100 Populus trichocarpa HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 78.0
SabraPtG0003100 Salix brachista HOM05D001033 ORTHO05D002045 2.5e-20 102.1 59 78.0
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 5.6e-20 100.9 59 79.7
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 1.2e-19 99.8 58 79.3
Sed0012509 Sechium edule HOM05D001033 ORTHO05D002045 1.2e-19 99.8 60 81.7
DCAR_032488 Daucus carota HOM05D001033 ORTHO05D002045 1.6e-19 99.4 59 78.0
HanXRQChr00c0759g0577231 Helianthus annuus HOM05D001033 ORTHO05D004888 8.1e-19 97.1 58 79.3
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 8.1e-19 97.1 59 78.0
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 8.1e-19 97.1 59 78.0
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 8.1e-19 97.1 59 78.0
Gohir.1Z049499 Gossypium hirsutum HOM05D001033 ORTHO05D002045 1.1e-18 96.7 59 78.0
Gohir.A06G136700 Gossypium hirsutum HOM05D001033 ORTHO05D002045 1.1e-18 96.7 59 78.0
Gohir.D01G102255 Gossypium hirsutum HOM05D001033 ORTHO05D002045 1.1e-18 96.7 59 78.0
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 1.4e-18 96.3 59 78.0
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 1.4e-18 96.3 59 78.0
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 1.4e-18 96.3 59 78.0
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 1.8e-18 95.9 59 76.3
COL.COLO4_03116 Corchorus olitorius HOM05D001033 ORTHO05D002045 1.8e-18 95.9 59 78.0
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 2.3e-18 95.5 58 77.6
unitig_91.g26505 Utricularia gibba HOM05D001033 ORTHO05D002045 3.1e-18 95.1 58 75.9
Gohir.A09G102200 Gossypium hirsutum HOM05D001033 ORTHO05D002045 4.0e-18 94.7 59 76.3
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.2e-18 94.4 59 76.3
RcHm_v2.0_CPg0502171 Rosa chinensis HOM05D001033 ORTHO05D002045 5.2e-18 94.4 59 74.6
VMungo0498G0004 Vigna mungo HOM05D001033 ORTHO05D002045 8.9e-18 93.6 60 73.3
Lalb_Chr03g0039381 Lupinus albus HOM05D001033 ORTHO05D002045 2.6e-17 92.0 61 72.1
Lalb_Chr07g0192291 Lupinus albus HOM05D001033 ORTHO05D002045 2.6e-17 92.0 61 72.1
BNapus_Darmor_BZH_scaffold_253p00170 Brassica napus HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BNapus_Darmor_BZH_scaffold_287p00090 Brassica napus HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
C02p43480 Brassica napus HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
C09p40490 Brassica napus HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BraA06t25426Z Brassica rapa HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BraSC25t45842Z Brassica rapa HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BraSC25t45873Z Brassica rapa HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BraSC58t46414Z Brassica rapa HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
BraSC58t46485Z Brassica rapa HOM05D001033 ORTHO05D002045 9.9e-17 90.1 59 72.9
arahy.Tifrunner.gnm1.ann1.L3ACWX Arachis hypogaea HOM05D001033 ORTHO05D002045 1.3e-16 89.7 59 71.2
AUR62014217 Chenopodium quinoa HOM05D001033 ORTHO05D002045 1.3e-16 89.7 59 69.5
CARHR282050 Cardamine hirsuta HOM05D001033 ORTHO05D002045 1.7e-16 89.4 59 71.2
Thhalv10011105m.g Eutrema salsugineum HOM05D001033 ORTHO05D002045 1.7e-16 89.4 59 71.2
PSO170G0878 Papaver somniferum HOM05D001033 ORTHO05D002045 1.7e-16 89.4 59 71.2
A06p23240 Brassica napus HOM05D001033 ORTHO05D002045 2.2e-16 89.0 59 71.2
PSO548G0127 Papaver somniferum HOM05D001033 ORTHO05D002045 2.2e-16 89.0 58 72.4
ATCG00430 Arabidopsis thaliana HOM05D001033 ORTHO05D002045 2.9e-16 88.6 59 71.2
BcaC03g15270 Brassica carinata HOM05D001033 ORTHO05D002045 2.9e-16 88.6 58 72.4
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 6.4e-16 87.4 61 72.1
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 6.4e-16 87.4 61 72.1
EL10As5g23625 Beta vulgaris HOM05D001033 ORTHO05D002045 6.4e-16 87.4 61 72.1
BcaC04g20697 Brassica carinata HOM05D001033 ORTHO05D002045 6.4e-16 87.4 59 71.2
BcaC05g28797 Brassica carinata HOM05D001033 ORTHO05D002045 6.4e-16 87.4 59 71.2
AL2G20700 Arabidopsis lyrata HOM05D001033 ORTHO05D002045 1.4e-15 86.3 59 69.5
AL2G21110 Arabidopsis lyrata HOM05D001033 ORTHO05D002045 1.4e-15 86.3 59 69.5
AL2G21470 Arabidopsis lyrata HOM05D001033 ORTHO05D002045 1.4e-15 86.3 59 69.5
PGSC0003DMG400006986 Solanum tuberosum HOM05D001033 ORTHO05D002045 1.4e-15 86.3 47 83.0
Ah.10g027540 Amaranthus hybridus HOM05D001033 ORTHO05D002045 1.9e-15 85.9 61 70.5
Medtr4g051225 Medicago truncatula HOM05D001033 ORTHO05D002045 2.4e-15 85.5 59 67.8
Medtr7g021790 Medicago truncatula HOM05D001033 ORTHO05D002045 2.4e-15 85.5 59 67.8
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.2e-14 83.2 58 67.2
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 1.6e-14 82.8 61 67.2
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 2.1e-14 82.4 62 64.5
BolSC45t60864H Brassica oleracea HOM05D001033 ORTHO05D002045 6.0e-14 80.9 54 70.4
MD09G1196100 Malus domestica HOM05D001033 ORTHO05D002045 7.8e-14 80.5 68 61.8
Os03g0639233 Oryza sativa ssp. japonica HOM05D001033 ORTHO05D002045 5.1e-13 77.8 58 62.1
TWI53G1242 Tripterygium wilfordii HOM05D001033 ORTHO05D002045 5.1e-13 77.8 53 67.9
Hund10570 Selenicereus undatus HOM05D001033 ORTHO05D002045 3.3e-12 75.1 59 59.3
Os12g0423484 Oryza sativa ssp. japonica HOM05D001033 ORTHO05D002045 2.1e-11 72.4 57 59.6
BcaB02g11351 Brassica carinata HOM05D001033 ORTHO05D002045 6.2e-11 70.9 56 64.3
ClCG03G005460 Citrullus lanatus HOM05D001033 ORTHO05D002045 1.1e-10 70.1 38 84.2
Hund10567 Selenicereus undatus HOM05D001033 ORTHO05D004888 1.1e-10 70.1 59 59.3
Zm00001eb133180 Zea mays HOM05D001033 ORTHO05D002045 1.8e-10 69.3 61 57.4
Zm00001eb039200 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Zm00001eb435030 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Zm00001eb435210 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Zm00001eb435670 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Zm00001eb437200 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Zm00001eb440980 Zea mays HOM05D001033 ORTHO05D002045 2.4e-10 68.9 61 57.4
Eucgr.A02746 Eucalyptus grandis HOM05D001033 ORTHO05D002045 4.0e-10 68.2 40 77.5
Lsat_1_v5_gn_3_130301 Lactuca sativa HOM05D001133 ORTHO05D000941 1.5e-09 66.2 74 48.6
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 3.4e-09 65.1 41 68.3
Sed0003172 Sechium edule HOM05D001033 ORTHO05D002045 7.6e-09 63.9 33 87.9
Migut.J01349 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.1e-07 60.1 49 55.1
BolSC49t61188H Brassica oleracea HOM05D001033 ORTHO05D002045 2.4e-07 58.9 61 55.7
SalBow1G1163 Salvia bowleyana HOM05D001033 ORTHO05D002045 4.2e-07 58.2 33 72.7
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 6.0e-06 54.3 33 78.8
Os12g0423313 Oryza sativa ssp. japonica HOM05D001033 ORTHO05D002045 7.8e-06 53.9 40 62.5


User provided reference genes

Program Settings