Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 3.3e-71 271.6 133 100.0
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 6.5e-59 230.7 133 84.2
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.4e-58 229.6 133 82.7
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 81.2
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.6e-57 224.9 131 83.2
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 7.9e-57 223.8 133 78.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 78.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 78.9
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.5e-55 219.5 132 78.8
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.5e-55 219.5 132 78.8
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 77.4
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 79.7
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.3e-55 218.0 132 79.5
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 77.4
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 76.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 77.4
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 77.4
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.7e-54 216.1 133 76.7
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 77.4
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.7e-54 214.9 140 75.7
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 75.9
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 75.9
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 75.9
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 75.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 4.8e-54 214.5 133 77.4
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 8.2e-54 213.8 133 77.4
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.1e-53 213.4 133 75.9
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.1e-53 213.4 132 79.5
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.9
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 76.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.9
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.9
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.1e-53 211.8 133 77.4
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 3.1e-53 211.8 176 63.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 76.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.6e-52 208.8 134 77.6
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 2.6e-52 208.8 133 72.9
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 1.3e-51 206.5 133 72.9
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.7e-51 206.1 133 73.7
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 2.2e-51 205.7 133 73.7
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.9e-51 205.3 130 74.6
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.2e-49 199.9 139 71.9
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.7e-49 198.7 133 70.7
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.1e-49 197.6 113 81.4
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 70.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 3.0e-48 195.3 128 69.5
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.6e-47 192.2 114 76.3
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 3.3e-47 191.8 133 67.7
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 4.4e-47 191.4 116 77.6
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 66.9
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 68.4
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 9.7e-47 190.3 120 74.2
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 67.7
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.2e-46 189.1 133 66.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 2.8e-46 188.7 133 66.9
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 2.8e-46 188.7 181 55.8
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 3.7e-46 188.3 133 66.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 4.8e-46 188.0 133 67.7
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 6.3e-46 187.6 133 66.9
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.4e-45 185.7 133 66.2
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 4.1e-45 184.9 133 64.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.0e-43 180.3 133 64.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.0e-43 180.3 133 64.7
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.7e-43 179.5 130 70.8
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 8.5e-43 177.2 114 71.9
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 8.5e-43 177.2 101 78.2
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 1.4e-42 176.4 133 61.7
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 8.0e-41 170.6 139 61.2
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 3.0e-40 168.7 128 62.5
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 6.7e-40 167.5 105 73.3
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.0e-39 166.0 103 72.8
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 4.4e-39 164.9 98 77.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 7.4e-39 164.1 127 57.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 9.7e-39 163.7 127 59.1
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.3e-38 163.3 105 71.4
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 3.7e-38 161.8 105 68.6
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 5.3e-37 157.9 93 77.4
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.6e-36 156.4 100 72.0
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.0e-36 156.0 128 57.0
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.5e-36 155.2 105 67.6
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.5e-36 154.8 98 74.5
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.7e-31 137.9 133 60.2
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 1.8e-29 132.9 128 49.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 9.1e-29 130.6 133 55.6
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.9e-26 122.9 110 48.2
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 2.3e-24 115.9 70 77.1
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.6e-23 112.5 111 48.6
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 4.8e-22 108.2 102 50.0
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 2.0e-20 102.8 111 45.0
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.1e-18 97.1 63 73.0
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 2.5e-18 95.9 109 43.1
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.6e-17 93.2 110 40.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.4e-15 85.5 81 51.9
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 1.0e-11 73.9 68 52.9
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 5.0e-11 71.6 73 43.8
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 8.6e-11 70.9 47 61.7
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 2.3e-08 62.8 89 36.0
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 7.5e-07 57.8 34 61.8
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 1.3e-06 57.0 36 66.7


User provided reference genes

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