Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 1.3e-146 523.1 265 100.0
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 2.7e-125 452.2 265 84.9
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 8.2e-114 414.1 278 78.8
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 5.3e-113 411.4 269 79.6
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.6e-112 409.8 271 76.8
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.5e-112 408.7 265 79.6
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 5.9e-112 407.9 264 77.3
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 5.9e-112 407.9 271 76.4
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 7.7e-112 407.5 234 85.9
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 2.9e-111 405.6 260 77.3
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 5.0e-111 404.8 265 76.2
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 6.5e-111 404.4 264 76.9
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 6.5e-111 404.4 270 76.3
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 8.5e-111 404.1 265 76.6
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.9e-110 402.9 266 77.4
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 1.9e-110 402.9 264 76.9
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.5e-110 402.5 265 76.6
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.5e-110 402.5 266 77.8
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 3.2e-110 402.1 267 75.7
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.2e-110 402.1 265 77.0
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 4.2e-110 401.7 261 78.5
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 5.5e-110 401.4 264 76.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 7.2e-110 401.0 264 76.1
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 9.4e-110 400.6 257 79.0
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 1.2e-109 400.2 257 76.7
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.6e-109 398.7 269 77.3
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 2.3e-108 396.0 266 76.7
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.3e-108 396.0 275 73.8
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 6.7e-108 394.4 264 76.5
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 2.6e-107 392.5 266 75.2
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 3.3e-107 392.1 263 74.5
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 3.3e-107 392.1 270 73.0
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 4.4e-107 391.7 266 74.8
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.4e-107 391.7 249 79.1
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.3e-106 390.2 264 73.9
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.3e-106 390.2 264 73.9
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 1.3e-106 390.2 263 74.9
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 2.2e-106 389.4 252 77.0
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 2.8e-106 389.0 265 72.1
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 2.8e-106 389.0 264 73.5
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 4.8e-106 388.3 264 74.6
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.8e-106 388.3 262 72.9
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 6.3e-106 387.9 268 72.4
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.4e-105 386.7 266 74.1
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.8e-105 386.3 264 73.5
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 2.4e-105 386.0 244 76.2
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 3.1e-105 385.6 243 78.6
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.1e-105 385.6 265 75.8
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 5.3e-105 384.8 246 75.2
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 7.0e-105 384.4 245 75.9
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 7.0e-105 384.4 252 75.4
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 7.0e-105 384.4 247 75.7
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 1.2e-104 383.6 266 72.2
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.7e-104 382.5 269 74.0
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 3.5e-104 382.1 301 66.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 3.5e-104 382.1 267 72.7
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 3.5e-104 382.1 267 73.0
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 3.5e-104 382.1 263 71.5
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 4.5e-104 381.7 264 70.8
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 5.9e-104 381.3 264 72.3
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 7.7e-104 380.9 266 72.2
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 6.5e-103 377.9 243 77.0
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 6.5e-103 377.9 257 71.6
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.5e-102 376.7 234 80.8
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.9e-102 376.3 233 81.1
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 4.2e-102 375.2 286 69.2
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 5.5e-102 374.8 264 70.5
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 2.1e-101 372.9 267 71.5
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 4.7e-101 371.7 251 76.1
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 6.1e-101 371.3 228 80.3
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 6.1e-101 371.3 267 70.8
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 6.1e-101 371.3 246 73.2
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 8.0e-101 370.9 246 75.2
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 1.4e-100 370.2 249 71.9
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.8e-100 369.8 266 68.8
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.8e-100 369.8 268 68.7
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 4.0e-100 368.6 261 70.5
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 4.0e-100 368.6 267 70.8
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 5.2e-100 368.2 251 72.9
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 8.8e-100 367.5 272 67.6
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.2e-99 367.1 247 74.9
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.5e-99 366.7 235 75.3
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 2.0e-99 366.3 252 72.2
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 2.0e-99 366.3 267 67.8
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 5.7e-99 364.8 262 67.9
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.7e-99 364.8 282 69.1
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 1.3e-98 363.6 214 81.8
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 1.7e-98 363.2 236 76.7
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.8e-98 362.5 267 66.7
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 3.7e-98 362.1 246 71.1
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 6.3e-98 361.3 248 70.6
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 6.3e-98 361.3 268 67.9
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.8e-97 359.8 354 56.2
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.8e-97 359.8 272 69.5
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 7.0e-97 357.8 267 66.7
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 7.0e-97 357.8 262 67.9
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 7.0e-97 357.8 248 72.6
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 7.0e-97 357.8 268 71.3
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 9.1e-97 357.5 262 66.8
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 9.1e-97 357.5 262 67.9
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.0e-96 356.3 249 68.7
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 2.7e-96 355.9 275 65.1
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 3.5e-96 355.5 276 64.5
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 3.5e-96 355.5 246 69.1
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 1.0e-95 354.0 257 67.7
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 1.0e-95 354.0 267 65.9
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 1.0e-95 354.0 213 81.7
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 2.3e-95 352.8 245 71.0
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 2.9e-95 352.4 248 69.0
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 6.6e-95 351.3 280 63.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 8.6e-95 350.9 249 67.5
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 1.1e-94 350.5 264 68.2
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 3.3e-94 349.0 332 58.1
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 3.6e-93 345.5 246 69.9
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 8.0e-93 344.4 245 68.2
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 9.8e-91 337.4 213 77.9
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.7e-90 335.5 270 68.1
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 4.9e-90 335.1 213 77.5
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 6.3e-90 334.7 260 66.5
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 4.1e-89 332.0 257 67.3
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 7.0e-89 331.3 263 63.9
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 1.3e-87 327.0 212 75.5
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 7.3e-86 321.2 273 64.8
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 2.8e-85 319.3 261 62.8
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.4e-84 317.0 243 68.3
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.4e-84 317.0 246 63.4
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 2.3e-84 316.2 265 64.5
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 4.0e-84 315.5 267 60.7
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.9e-82 308.5 204 73.0
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 3.9e-79 298.9 238 60.9
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.1e-78 297.4 198 75.3
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.5e-78 296.2 305 54.4
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.8e-77 292.7 206 71.8
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 4.7e-77 292.0 264 61.7
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 4.7e-77 292.0 184 80.4
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.1e-76 290.8 264 56.1
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 8.9e-76 287.7 243 59.3
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.0e-75 286.6 196 77.6
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.6e-75 286.2 243 59.3
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 1.4e-73 280.4 264 55.3
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 5.4e-73 278.5 200 68.5
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.7e-71 273.5 234 58.1
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 2.3e-71 273.1 182 71.4
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 6.2e-69 265.0 252 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 7.5e-67 258.1 245 53.9
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 2.4e-65 253.1 265 52.8
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 7.3e-62 241.5 139 84.9
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.2e-61 240.7 147 83.7
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.2e-58 229.9 207 61.8
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 4.6e-56 222.2 244 48.0
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 5.6e-54 215.3 234 49.1
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.6e-53 212.6 187 62.0
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 8.4e-50 201.4 122 84.4
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.9e-46 190.3 166 62.7
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.7e-42 177.2 104 78.8
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 8.7e-39 164.9 105 79.0
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.1e-36 156.4 100 81.0
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 6.9e-36 155.2 148 59.5
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.2e-34 150.2 142 57.7
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 8.4e-34 148.3 238 39.5
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 2.8e-29 133.3 119 58.8
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 2.8e-29 133.3 119 58.8
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 5.3e-28 129.0 84 78.6
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 1.3e-23 114.4 82 65.9
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.9e-22 110.5 172 43.6
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.9e-20 102.1 160 39.4
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 2.6e-19 100.1 84 61.9
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 1.2e-16 91.3 66 62.1
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.6e-16 90.9 68 66.2
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 2.1e-16 90.5 285 29.8
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.0e-15 88.2 66 69.7
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.5e-09 67.0 126 40.5
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 3.0e-07 60.1 190 25.8
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.0e-07 60.1 58 50.0
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 3.9e-07 59.7 39 74.4


User provided reference genes

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