Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00210 Erythranthe guttata HOM05D003420 ORTHO05D003970 8.4e-38 159.8 80 100.0
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 2.1e-20 102.1 82 65.9
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 7.9e-20 100.1 73 68.5
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.8e-19 99.0 82 64.6
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 5.1e-19 97.4 87 63.2
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 1.1e-18 96.3 82 63.4
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 1.1e-18 96.3 82 63.4
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.1e-18 96.3 82 59.8
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 1.5e-18 95.9 82 63.4
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 2.0e-18 95.5 82 62.2
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 2.0e-18 95.5 82 61.0
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 3.3e-18 94.7 82 61.0
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 3.3e-18 94.7 82 62.2
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 7.4e-18 93.6 82 61.0
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 7.4e-18 93.6 82 62.2
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.3e-17 92.8 82 62.2
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 1.3e-17 92.8 83 59.0
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 1.3e-17 92.8 82 57.3
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 1.3e-17 92.8 82 59.8
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 1.7e-17 92.4 82 61.0
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 2.2e-17 92.0 82 61.0
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 2.8e-17 91.7 82 58.5
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 3.7e-17 91.3 82 59.8
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 3.7e-17 91.3 82 58.5
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 3.7e-17 91.3 82 59.8
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 4.8e-17 90.9 82 57.3
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 4.8e-17 90.9 83 62.7
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.3e-17 90.5 82 59.8
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 6.3e-17 90.5 82 57.3
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 1.1e-16 89.7 82 61.0
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.4e-16 89.4 82 59.8
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.4e-16 89.4 82 56.1
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 1.8e-16 89.0 82 59.8
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 1.8e-16 89.0 82 59.8
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 1.8e-16 89.0 82 59.8
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 1.8e-16 89.0 82 59.8
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 1.8e-16 89.0 82 59.8
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 2.4e-16 88.6 82 59.8
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 2.4e-16 88.6 82 58.5
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 2.4e-16 88.6 82 57.3
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 3.1e-16 88.2 82 58.5
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 4.1e-16 87.8 82 58.5
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 5.3e-16 87.4 82 58.5
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 5.3e-16 87.4 82 58.5
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 7.0e-16 87.0 82 56.1
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 9.1e-16 86.7 82 58.5
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 9.1e-16 86.7 82 58.5
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 1.2e-15 86.3 82 57.3
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 1.2e-15 86.3 82 57.3
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.2e-15 86.3 82 57.3
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 1.6e-15 85.9 82 57.3
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 1.6e-15 85.9 82 57.3
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 1.6e-15 85.9 82 57.3
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 58.5
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 57.3
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 57.3
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 57.3
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 53.7
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 56.1
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 54.9
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 2.0e-15 85.5 82 54.9
RcHm_v2.0_Chr1g0335061 Rosa chinensis HOM05D003420 ORTHO05D003970 2.0e-15 85.5 81 58.0
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.6e-15 85.1 82 56.1
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.6e-15 85.1 82 56.1
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 2.6e-15 85.1 85 56.5
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 57.3
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 57.3
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 57.3
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 57.3
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 57.3
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 52.4
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 54.9
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 3.5e-15 84.7 82 54.9
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 4.5e-15 84.3 82 54.9
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 4.5e-15 84.3 83 55.4
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 4.5e-15 84.3 82 54.9
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 5.9e-15 84.0 82 53.7
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 5.9e-15 84.0 82 51.2
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 5.9e-15 84.0 105 46.7
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.0e-14 83.2 82 53.7
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 1.3e-14 82.8 77 57.1
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 1.3e-14 82.8 77 57.1
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 1.3e-14 82.8 82 53.7
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.3e-14 82.8 82 54.9
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 1.3e-14 82.8 82 56.1
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 1.3e-14 82.8 82 56.1
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.7e-14 82.4 82 57.3
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.7e-14 82.4 82 57.3
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 3.8e-14 81.3 82 53.7
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 3.8e-14 81.3 82 56.1
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 5.0e-14 80.9 82 56.1
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 6.5e-14 80.5 82 52.4
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 6.5e-14 80.5 82 52.4
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 8.5e-14 80.1 82 51.2
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 1.1e-13 79.7 118 40.7
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 1.1e-13 79.7 118 40.7
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 1.5e-13 79.3 71 57.7
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 1.9e-13 79.0 63 63.5
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.5e-13 78.6 82 52.4
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 2.5e-13 78.6 82 50.0
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 1.2e-12 76.3 82 51.2
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 1.6e-12 75.9 82 50.0
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 6.1e-12 73.9 82 48.8
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 6.1e-12 73.9 73 56.2
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 1.8e-11 72.4 82 47.6
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 1.1e-10 69.7 84 50.0
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 1.5e-10 69.3 83 47.0
Lj4C710T4 Lonicera japonica HOM05D003420 ORTHO05D003970 2.0e-10 68.9 76 52.6
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 3.3e-10 68.2 66 54.5
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 7.5e-10 67.0 62 56.5
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 7.5e-10 67.0 66 54.5
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 4.8e-09 64.3 70 50.0
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 8.2e-09 63.5 82 45.1
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 8.2e-09 63.5 73 45.2
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 2.4e-08 62.0 69 53.6
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.3e-08 60.8 82 43.9
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.3e-08 60.8 82 43.9
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 9.1e-08 60.1 69 50.7
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 1.7e-06 55.8 48 64.6
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 1.7e-06 55.8 51 56.9
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 2.9e-06 55.1 57 52.6
Glyma.03G026400 Glycine max HOM05D003420 ORTHO05D003970 3.8e-06 54.7 51 56.9
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 5.0e-06 54.3 62 46.8


User provided reference genes

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