Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00170 Erythranthe guttata HOM05D000650 ORTHO05D190781 2.9e-53 211.5 96 100.0
Migut.I00165 Erythranthe guttata HOM05D000650 ORTHO05D000735 2.6e-09 65.5 54 64.8
SGA_v2.0_scaffold25G10912 Striga asiatica HOM05D000046 ORTHO05D000195 3.8e-08 61.6 41 73.2
Oeu047020.2 Olea europaea HOM05D000650 ORTHO05D000735 4.9e-08 61.2 35 77.1
Solyc03g116350.3 Solanum lycopersicum HOM05D000650 ORTHO05D000735 4.9e-08 61.2 35 77.1
Sopen03g035280 Solanum pennellii HOM05D000650 ORTHO05D000735 4.9e-08 61.2 35 77.1
PGSC0003DMG400000600 Solanum tuberosum HOM05D000650 ORTHO05D000735 4.9e-08 61.2 35 77.1
MSTRG.23020 Avicennia marina HOM05D000650 ORTHO05D000735 8.4e-08 60.5 35 77.1
COL.COLO4_24543 Corchorus olitorius HOM05D004667 ORTHO05D005522 8.4e-08 60.5 31 83.9
Migut.D01834 Erythranthe guttata HOM05D000650 ORTHO05D000735 8.4e-08 60.5 35 80.0
Dinv19945 Davidia involucrata HOM05D000650 ORTHO05D000735 1.4e-07 59.7 31 83.9
Duzib084G1407 Durio zibethinus HOM05D000650 ORTHO05D000735 1.4e-07 59.7 43 62.8
HanXRQChr05g0132371 Helianthus annuus HOM05D000650 ORTHO05D000735 1.4e-07 59.7 40 62.5
Oeu060802.1 Olea europaea HOM05D000650 ORTHO05D000735 1.4e-07 59.7 41 68.3
SGA_v2.0_scaffold56G20025 Striga asiatica HOM05D000189 ORTHO05D000474 1.4e-07 59.7 35 77.1
Lsat_1_v5_gn_5_19381 Lactuca sativa HOM05D000189 ORTHO05D000474 1.9e-07 59.3 31 83.9
PSO017G1572 Papaver somniferum HOM05D000650 ORTHO05D000735 1.9e-07 59.3 31 80.6
PSO478G0327 Papaver somniferum HOM05D000650 ORTHO05D000735 1.9e-07 59.3 31 80.6
Peaxi162Scf00274g00835 Petunia axillaris HOM05D000650 ORTHO05D000735 1.9e-07 59.3 35 77.1
MSTRG.9634 Avicennia marina HOM05D000650 ORTHO05D000735 2.4e-07 58.9 35 71.4
CAN.G407.115 Capsicum annuum HOM05D000650 ORTHO05D000735 2.4e-07 58.9 35 74.3
Nitab4.5_0002257g0130 Nicotiana tabacum HOM05D000650 ORTHO05D000735 2.4e-07 58.9 35 74.3
Dinv38691 Davidia involucrata HOM05D000650 ORTHO05D000735 4.2e-07 58.2 31 80.6
ECA232G2817 Erigeron canadensis HOM05D000650 ORTHO05D000735 4.2e-07 58.2 31 80.6
HanXRQChr04g0103091 Helianthus annuus HOM05D000650 ORTHO05D000735 4.2e-07 58.2 33 72.7
Lj5A112T66 Lonicera japonica HOM05D000650 ORTHO05D000735 4.2e-07 58.2 31 80.6
Atru.chr9.2270 Acer truncatum HOM05D000650 ORTHO05D000735 5.4e-07 57.8 31 80.6
Atru.chr9.2276 Acer truncatum HOM05D000650 ORTHO05D000735 5.4e-07 57.8 31 80.6
Duzib068G0550 Durio zibethinus HOM05D000650 ORTHO05D000735 5.4e-07 57.8 35 71.4
Os06g0226600 Oryza sativa ssp. japonica HOM05D000650 ORTHO05D000735 5.4e-07 57.8 31 74.2
VMungo1309G2258 Vigna mungo HOM05D000650 ORTHO05D000735 5.4e-07 57.8 38 65.8
Duzib205G0931 Durio zibethinus HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
Gohir.A03G065700 Gossypium hirsutum HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
Gohir.D03G092200 Gossypium hirsutum HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
Gorai.003G095800 Gossypium raimondii HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
HanXRQChr09g0270741 Helianthus annuus HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
MBI05_g35459_MAGBIO Magnolia biondii HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 80.6
Phvul.009G188300 Phaseolus vulgaris HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
Thecc.03G084100 Theobroma cacao HOM05D000650 ORTHO05D000735 7.1e-07 57.4 31 77.4
Ciclev10022553m.g Citrus clementina HOM05D000650 ORTHO05D000735 9.3e-07 57.0 31 77.4
ECA246G5134 Erigeron canadensis HOM05D000189 ORTHO05D000474 9.3e-07 57.0 33 69.7
Medtr5g091800 Medicago truncatula HOM05D000650 ORTHO05D000735 9.3e-07 57.0 50 50.0
SalBow5G3841 Salvia bowleyana HOM05D000650 ORTHO05D000735 9.3e-07 57.0 34 76.5
SGA_v2.0_scaffold9G04904 Striga asiatica HOM05D000650 ORTHO05D000735 9.3e-07 57.0 36 63.9
THA.LOC104819441 Tarenaya hassleriana HOM05D000650 ORTHO05D000735 9.3e-07 57.0 31 74.2
GSVIVG01000808001 Vitis vinifera HOM05D000650 ORTHO05D000735 9.3e-07 57.0 36 61.1
Ah.01g003380 Amaranthus hybridus HOM05D000650 ORTHO05D000735 1.2e-06 56.6 36 63.9
EL10Ac9g22653 Beta vulgaris HOM05D000650 ORTHO05D000735 1.2e-06 56.6 36 63.9
CDE02G1990 Ceratophyllum demersum HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 80.6
CDE08G0215 Ceratophyllum demersum HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 80.6
AUR62014986 Chenopodium quinoa HOM05D000650 ORTHO05D000735 1.2e-06 56.6 36 63.9
AUR62029134 Chenopodium quinoa HOM05D000650 ORTHO05D000735 1.2e-06 56.6 36 63.9
HanXRQChr08g0236321 Helianthus annuus HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 74.2
Hma1.2p1_0104F.1_g050050 Hydrangea macrophylla HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 77.4
PSO063G5325 Papaver somniferum HOM05D000650 ORTHO05D000735 1.2e-06 56.6 33 72.7
PSO832G4594 Papaver somniferum HOM05D000650 ORTHO05D000735 1.2e-06 56.6 33 72.7
TAR629G1090 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 80.6
vmacro17556 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 1.2e-06 56.6 31 77.4
CSS0008091 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 74.2
Cpa.g.sc50.72 Carica papaya HOM05D000650 ORTHO05D000735 1.6e-06 56.2 36 61.1
FvH4_5g15180 Fragaria vesca HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 77.4
FAN08G2318 Fragaria x ananassa HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 77.4
Psat0s1339g0040 Pisum sativum HOM05D000650 ORTHO05D000735 1.6e-06 56.2 50 50.0
Rhsim08G0157100 Rhododendron simsii HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 77.4
Rhsim12G0157200 Rhododendron simsii HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 77.4
THA.LOC104813878 Tarenaya hassleriana HOM05D000650 ORTHO05D000735 1.6e-06 56.2 31 77.4
AL2G34400 Arabidopsis lyrata HOM05D000650 ORTHO05D000735 2.1e-06 55.8 31 77.4
AT1G74520 Arabidopsis thaliana HOM05D000650 ORTHO05D000735 2.1e-06 55.8 31 77.4
Carub.0002s2132 Capsella rubella HOM05D000650 ORTHO05D000735 2.1e-06 55.8 31 77.4
RcHm_v2.0_Chr7g0180981 Rosa chinensis HOM05D000650 ORTHO05D000735 2.1e-06 55.8 31 77.4
vmacro16555 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 2.1e-06 55.8 31 77.4
HPP92_016913 Vanilla planifolia HOM05D000650 ORTHO05D000735 2.1e-06 55.8 35 68.6
BraA02t06982Z Brassica rapa HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 77.4
DCAR_021527 Daucus carota HOM05D000650 ORTHO05D000735 2.7e-06 55.5 36 66.7
Thhalv10019224m.g Eutrema salsugineum HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 77.4
Glyma.04G171200 Glycine max HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Glyma.06G192700 Glycine max HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Gohir.A12G176400 Gossypium hirsutum HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Gohir.D12G179240 Gossypium hirsutum HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Gorai.008G192100 Gossypium raimondii HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Nn4g23125 Nelumbo nucifera HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 77.4
Hund02660 Selenicereus undatus HOM05D000650 ORTHO05D000735 2.7e-06 55.5 31 74.2
Atru.chr6.1473 Acer truncatum HOM05D000650 ORTHO05D000735 3.5e-06 55.1 36 55.6
Aa31LG4G4780 Aethionema arabicum HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 74.2
arahy.Tifrunner.gnm1.ann1.14KYNF Arachis hypogaea HOM05D000650 ORTHO05D000735 3.5e-06 55.1 58 48.3
arahy.Tifrunner.gnm1.ann1.L9WZHD Arachis hypogaea HOM05D000650 ORTHO05D000735 3.5e-06 55.1 58 48.3
CiPaw.12G014200 Carya illinoinensis HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 74.2
Hma1.2p1_0735F.1_g210465 Hydrangea macrophylla HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 77.4
Hma1.2p1_0735F.1_g210480 Hydrangea macrophylla HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 77.4
Lsat_1_v5_gn_4_108900 Lactuca sativa HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 77.4
Lj1g0010339 Lotus japonicus HOM05D000650 ORTHO05D000735 3.5e-06 55.1 35 65.7
Phvul.008G190500 Phaseolus vulgaris HOM05D000650 ORTHO05D000735 3.5e-06 55.1 50 52.0
TAR371G0018 Trochodendron aralioides HOM05D001645 ORTHO05D000735 3.5e-06 55.1 31 77.4
GSVIVG01008026001 Vitis vinifera HOM05D000650 ORTHO05D000735 3.5e-06 55.1 31 77.4
Actinidia37638 Actinidia chinensis HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 74.2
arahy.Tifrunner.gnm1.ann1.BQY73P Arachis hypogaea HOM05D000650 ORTHO05D000735 4.6e-06 54.7 32 71.9
A05p03210 Brassica napus HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
C04p03860 Brassica napus HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
BolC4t22022H Brassica oleracea HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
BraA05t19311Z Brassica rapa HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
CSS0007852 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 71.0
CSS0010126 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 71.0
Duzib147G1118 Durio zibethinus HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
Thhalv10017357m.g Eutrema salsugineum HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
Manes.14G077000 Manihot esculenta HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 74.2
Sp5g29700 Schrenkiella parvula HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 74.2
Thecc.01G160000 Theobroma cacao HOM05D000650 ORTHO05D000735 4.6e-06 54.7 36 61.1
TWI60G1427 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 4.6e-06 54.7 31 74.2
arahy.Tifrunner.gnm1.ann1.FZY3XY Arachis hypogaea HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
BcaB05g24858 Brassica carinata HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
BcaC03g15512 Brassica carinata HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
BcaC08g46885 Brassica carinata HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
A02p19430 Brassica napus HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
C02p31950 Brassica napus HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 6.0e-06 54.3 31 74.2
BolC2t09229H Brassica oleracea HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
CANSAT80G1082 Cannabis sativa HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
DCAR_009792 Daucus carota HOM05D000650 ORTHO05D000735 6.0e-06 54.3 36 58.3
DCAR_016538 Daucus carota HOM05D000650 ORTHO05D000735 6.0e-06 54.3 39 61.5
SalBow8G3109 Salvia bowleyana HOM05D000650 ORTHO05D000735 6.0e-06 54.3 36 61.1
Sc12g0006270 Simmondsia chinensis HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
TWI81G0650 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 74.2
VMungo0647G0535 Vigna mungo HOM05D000650 ORTHO05D000735 6.0e-06 54.3 50 50.0
Zm00001eb279570 Zea mays HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 71.0
Zm00001eb372500 Zea mays HOM05D000650 ORTHO05D000735 6.0e-06 54.3 31 71.0
Aqoxy3G00681 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 7.8e-06 53.9 31 74.2
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 7.8e-06 53.9 31 74.2
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 7.8e-06 53.9 31 74.2
A04p32400 Brassica napus HOM05D000115 ORTHO05D005317 7.8e-06 53.9 36 58.3
BolC4t28492H Brassica oleracea HOM05D000650 ORTHO05D000735 7.8e-06 53.9 36 58.3
BraA04t18693Z Brassica rapa HOM05D000115 ORTHO05D005317 7.8e-06 53.9 36 58.3
CARHR067800 Cardamine hirsuta HOM05D000650 ORTHO05D000735 7.8e-06 53.9 31 77.4
Cpa.g.sc1474.1 Carica papaya HOM05D000650 ORTHO05D000735 7.8e-06 53.9 49 53.1
Haze_07342 Corylus avellana HOM05D000650 ORTHO05D000735 7.8e-06 53.9 32 71.9
Glyma.14G027000 Glycine max HOM05D000650 ORTHO05D000735 7.8e-06 53.9 42 52.4
HanXRQChr10g0278191 Helianthus annuus HOM05D000650 ORTHO05D000735 7.8e-06 53.9 31 71.0
HanXRQChr16g0502881 Helianthus annuus HOM05D000650 ORTHO05D000735 7.8e-06 53.9 31 74.2
Lalb_Chr04g0248681 Lupinus albus HOM05D000650 ORTHO05D000735 7.8e-06 53.9 52 48.1
TPR.G12628 Trifolium pratense HOM05D000650 ORTHO05D000735 7.8e-06 53.9 52 46.2


User provided reference genes

Program Settings