Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 0.0e+00 1424.8 749 100.0
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 1.4e-248 863.2 862 61.5
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 2.2e-220 769.6 796 59.2
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 7.3e-208 728.0 793 56.0
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.5e-168 597.4 839 49.8
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 5.8e-165 585.5 802 46.0
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 2.9e-164 583.2 771 48.0
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 3.8e-164 582.8 790 48.4
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 8.4e-164 581.6 843 50.4
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.4e-163 580.9 561 59.4
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 1.9e-163 580.5 824 46.7
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 1.5e-160 570.9 793 45.9
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 4.8e-159 565.8 887 43.1
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 1.1e-158 564.7 856 45.9
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.5e-157 559.3 806 45.8
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 9.3e-155 551.6 776 46.9
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 2.3e-153 547.0 633 53.4
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.4e-150 537.0 945 41.5
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.1e-150 536.2 778 46.3
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.5e-149 534.3 796 45.2
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.4e-149 533.1 823 45.1
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 5.9e-149 532.3 791 45.0
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 7.7e-149 531.9 923 41.4
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.7e-148 530.8 778 46.5
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 6.5e-148 528.9 680 49.9
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 3.2e-147 526.6 680 49.6
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 7.2e-147 525.4 465 60.2
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 1.6e-146 524.2 478 60.0
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.7e-146 523.5 675 49.3
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 4.6e-146 522.7 917 40.8
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 4.6e-146 522.7 899 41.9
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 4.6e-146 522.7 892 41.6
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 2.3e-145 520.4 791 44.4
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 3.0e-145 520.0 810 43.0
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 3.0e-145 520.0 724 46.0
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 6.7e-145 518.8 914 39.9
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 6.7e-145 518.8 789 45.8
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 6.7e-145 518.8 477 58.7
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 6.7e-145 518.8 606 52.5
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 1.1e-144 518.1 994 39.3
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 2.0e-144 517.3 475 60.2
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 2.5e-144 516.9 693 48.1
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 2.5e-144 516.9 793 45.9
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.3e-143 514.6 521 56.4
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 1.7e-143 514.2 765 45.5
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 2.2e-143 513.8 871 41.7
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 6.3e-143 512.3 694 47.4
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 8.2e-143 511.9 628 50.6
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.1e-142 511.5 781 44.0
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 1.4e-142 511.1 837 43.1
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 4.5e-141 506.1 504 55.8
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 7.7e-141 505.4 696 46.7
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.7e-140 504.2 533 54.4
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 1.7e-140 504.2 512 54.7
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 2.2e-140 503.8 518 56.2
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 2.9e-140 503.4 505 55.8
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 5.0e-140 502.7 487 56.9
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 8.5e-140 501.9 623 51.2
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 3.6e-138 496.5 443 58.7
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 5.7e-136 489.2 701 47.8
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 2.2e-135 487.3 973 38.6
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 3.7e-135 486.5 837 41.6
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 4.8e-135 486.1 777 42.7
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 8.2e-135 485.3 781 43.9
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 7.0e-134 482.3 770 44.3
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.0e-133 480.7 945 38.1
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 2.2e-132 477.2 891 39.2
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 2.9e-132 476.9 756 44.2
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 3.8e-132 476.5 772 44.6
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 1.5e-131 474.6 437 60.6
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 3.6e-130 469.9 464 56.5
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 4.7e-130 469.5 789 42.2
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.0e-129 468.4 769 44.0
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 1.4e-129 468.0 700 45.0
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 5.2e-129 466.1 767 43.0
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 6.7e-129 465.7 679 43.4
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 9.7e-128 461.8 710 44.8
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 9.7e-128 461.8 859 40.0
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 1.7e-127 461.1 750 42.5
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.1e-126 458.4 808 40.2
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 5.3e-126 456.1 749 43.1
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 9.1e-126 455.3 765 42.0
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 2.0e-125 454.1 994 36.2
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 2.2e-124 450.7 743 46.0
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.2e-122 444.9 393 60.8
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 1.4e-121 441.4 749 45.9
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 3.0e-121 440.3 750 46.0
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 2.6e-120 437.2 753 41.8
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 4.4e-120 436.4 742 44.5
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 4.4e-120 436.4 473 52.2
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 1.7e-116 424.5 445 52.4
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 5.0e-116 422.9 766 43.1
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 8.5e-116 422.2 777 44.3
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 3.2e-115 420.2 619 44.7
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 4.2e-115 419.9 786 42.7
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 3.4e-112 410.2 714 41.6
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 1.9e-107 394.4 767 40.9
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 1.6e-106 391.3 796 39.4
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 2.8e-106 390.6 411 52.1
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 4.6e-101 373.2 391 55.0
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 2.4e-94 350.9 228 74.1
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 5.0e-92 343.2 783 36.3
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.7e-77 294.3 472 39.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 1.6e-66 258.5 412 42.5
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 5.4e-62 243.4 299 49.8
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 3.3e-43 181.0 322 45.0
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 1.1e-38 166.0 208 41.8
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.0e-36 159.5 184 47.8
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 3.2e-30 137.9 110 62.7
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 3.0e-28 131.3 82 72.0
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.6e-21 107.8 81 60.5
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 5.0e-15 87.4 84 57.1
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 2.5e-14 85.1 157 39.5
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 1.2e-08 66.2 132 34.1
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 1.3e-07 62.8 66 53.0


User provided reference genes

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