Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 3.5e-141 505.4 340 100.0
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 4.2e-86 322.4 333 74.2
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 2.8e-82 309.7 337 68.2
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 1.0e-79 301.2 361 70.4
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 2.5e-70 270.0 347 65.1
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 5.5e-70 268.9 336 62.2
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.9e-68 262.7 345 63.8
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 9.7e-67 258.1 334 52.4
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 2.2e-66 256.9 356 55.3
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 3.7e-66 256.1 346 56.6
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.1e-65 254.6 336 57.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 5.3e-65 252.3 357 61.1
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 6.9e-65 251.9 363 56.2
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.5e-64 250.8 356 62.1
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.9e-64 248.8 345 62.9
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.0e-63 248.1 357 55.7
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 1.0e-63 248.1 335 47.8
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.9e-63 246.5 374 53.7
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 2.9e-63 246.5 344 60.5
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 6.5e-63 245.4 333 55.0
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-62 244.6 342 59.9
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 5.5e-62 242.3 345 59.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 1.2e-61 241.1 334 57.5
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.6e-61 240.7 366 60.1
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 2.1e-61 240.4 352 60.8
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 2.7e-61 240.0 360 57.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.0e-60 238.0 385 58.2
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.4e-60 237.7 346 53.2
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.8e-60 237.3 332 47.6
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.9e-60 236.1 347 58.8
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.9e-60 236.1 347 58.8
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 5.1e-60 235.7 333 58.9
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 2.0e-59 233.8 366 55.2
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 2.6e-59 233.4 350 63.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.3e-59 233.0 340 57.9
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 9.7e-59 231.5 337 56.1
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 9.7e-59 231.5 332 46.4
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 2.2e-58 230.3 348 58.3
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 2.8e-58 229.9 372 54.6
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 1.1e-57 228.0 360 55.8
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.4e-57 227.6 336 44.9
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 2.4e-57 226.9 350 60.6
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 4.1e-57 226.1 369 57.5
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 1.5e-56 224.2 365 60.0
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 7.7e-56 221.9 334 56.3
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 7.7e-56 221.9 350 58.6
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 5.0e-55 219.2 375 57.3
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 6.5e-55 218.8 347 57.9
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 8.5e-55 218.4 375 56.0
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.1e-54 218.0 354 48.9
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 1.5e-54 217.6 354 47.5
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.5e-54 217.6 356 57.9
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 2.5e-54 216.9 337 48.7
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 2.5e-54 216.9 352 59.1
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 3.2e-54 216.5 349 50.4
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 4.2e-54 216.1 347 54.5
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 4.2e-54 216.1 368 56.2
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.2e-54 216.1 349 56.4
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.6e-53 214.2 341 53.1
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 2.1e-53 213.8 334 54.8
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 3.6e-53 213.0 334 55.1
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 3.6e-53 213.0 331 50.8
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.0e-52 211.5 347 57.9
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.4e-52 211.1 366 53.0
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.0e-52 209.9 333 50.8
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.0e-52 209.9 333 50.8
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 4.0e-52 209.5 353 56.7
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 5.2e-52 209.1 333 48.9
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 5.2e-52 209.1 366 53.3
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.8e-52 208.4 353 56.4
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.5e-51 207.6 345 55.4
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 2.6e-51 206.8 335 48.7
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 9.7e-51 204.9 382 52.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 1.1e-49 201.4 335 50.4
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.1e-49 201.4 388 54.1
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.4e-49 201.1 369 40.9
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.2e-48 198.0 338 53.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.2e-48 198.0 342 52.3
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 3.5e-48 196.4 168 62.5
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 3.5e-48 196.4 380 54.2
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.2e-47 193.7 334 56.9
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.5e-46 191.0 333 51.7
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 7.2e-46 188.7 388 42.8
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 7.2e-46 188.7 396 44.4
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 4.4e-43 179.5 288 54.2
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 7.5e-43 178.7 323 56.0
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.6e-40 171.0 345 52.2
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 4.5e-40 169.5 339 39.2
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 1.7e-39 167.5 354 46.0
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.7e-37 160.2 395 47.6
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 8.0e-37 158.7 151 62.3
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 3.0e-36 156.8 161 56.5
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 2.0e-35 154.1 270 55.2
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 7.5e-35 152.1 140 57.1
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 9.8e-35 151.8 198 48.5
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.1e-33 148.3 121 67.8
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 4.5e-32 142.9 286 56.3
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.5e-30 137.9 393 43.0
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 3.3e-30 136.7 116 56.9
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 7.2e-30 135.6 125 57.6
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 7.5e-27 125.6 273 49.1
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.8e-25 120.9 259 48.3
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 1.6e-24 117.9 184 37.5
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 2.7e-24 117.1 179 39.1
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.5e-22 111.3 403 30.5
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 7.3e-22 109.0 105 48.6
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 4.0e-20 103.2 167 40.7
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 5.2e-20 102.8 86 68.6
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 2.6e-19 100.5 152 43.4
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 4.4e-19 99.8 186 34.9
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 1.7e-18 97.8 99 48.5
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 3.7e-18 96.7 90 61.1
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.0e-15 88.6 92 55.4
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.3e-15 87.4 79 63.3
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.6e-14 82.8 122 38.5
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.2e-13 81.6 77 61.0
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.6e-13 80.1 85 56.5
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 6.2e-13 79.3 106 40.6
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.2e-13 79.3 106 40.6
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 6.2e-13 79.3 109 39.4
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 8.9e-12 75.5 106 39.6
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-11 75.1 81 45.7
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-11 73.6 75 49.3
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-10 71.2 102 39.2
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 2.2e-10 70.9 87 52.9
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 4.1e-09 66.6 68 48.5
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-08 65.1 41 65.9
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 3.5e-08 63.5 102 40.2
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-08 63.2 108 35.2
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-08 62.8 124 33.1
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-08 62.8 105 37.1
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 7.8e-08 62.4 98 37.8
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-07 62.0 102 38.2
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-07 60.5 108 35.2
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-07 60.5 102 37.3
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-07 60.5 88 39.8
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 8.6e-07 58.9 102 37.3
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 8.6e-07 58.9 105 36.2
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-06 57.8 118 32.2
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-06 57.0 108 34.3
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-06 57.0 102 35.3
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 4.3e-06 56.6 102 37.3
arahy.Tifrunner.gnm1.ann1.NAL5BM Arachis hypogaea HOM05D008215 ORTHO05D004366 9.5e-06 55.5 63 44.4


User provided reference genes

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