Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 1.3e-88 329.7 167 100.0
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 1.3e-32 143.7 148 49.3
Migut.I00087 Erythranthe guttata HOM05D062370 ORTHO05D001819 2.4e-18 96.3 92 51.1
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 7.7e-17 91.3 148 36.5
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.7e-16 90.1 148 36.5
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.1e-15 87.4 148 35.8
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 5.5e-15 85.1 139 34.5
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 9.4e-15 84.3 149 34.9
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 2.1e-14 83.2 148 33.1
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.1e-14 81.6 148 33.8
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 3.0e-13 79.3 167 30.5
Nitab4.5_0002228g0040 Nicotiana tabacum HOM05D011410 ORTHO05D013015 3.0e-13 79.3 142 36.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 5.2e-13 78.6 147 33.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 6.7e-13 78.2 132 34.1
CAN.G111.34 Capsicum annuum HOM05D011410 ORTHO05D013015 8.8e-13 77.8 145 32.4
Migut.G01351 Erythranthe guttata HOM05D022792 ORTHO05D001819 8.8e-13 77.8 142 33.1
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 8.8e-13 77.8 148 33.8
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.5e-12 77.0 149 34.2
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 3.3e-12 75.9 149 31.5
Peaxi162Scf00089g01410 Petunia axillaris HOM05D011410 ORTHO05D013015 3.3e-12 75.9 145 33.8
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.4e-12 75.5 148 32.4
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.5e-12 74.7 158 31.6
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.3e-11 73.9 147 32.7
Aqoxy3G03791 Aquilegia oxysepala HOM05D023066 ORTHO05D001819 1.7e-11 73.6 138 30.4
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 2.2e-11 73.2 149 31.5
Migut.I00331 Erythranthe guttata HOM05D022792 ORTHO05D001819 4.8e-11 72.0 118 36.4
Sopen01g041270 Solanum pennellii HOM05D011410 ORTHO05D013015 4.8e-11 72.0 147 35.4
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 6.3e-11 71.6 146 31.5
Solyc01g097660.2 Solanum lycopersicum HOM05D011410 ORTHO05D013015 6.3e-11 71.6 146 33.6
Rhsim04G0235800 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.1e-10 70.9 153 30.1
Rhsim04G0238300 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.1e-10 70.9 153 30.1
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 4.1e-10 68.9 149 32.2
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 5.3e-10 68.6 146 31.5
CAN.G111.37 Capsicum annuum HOM05D011410 ORTHO05D013015 5.3e-10 68.6 148 32.4
Nitab4.5_0000360g0070 Nicotiana tabacum HOM05D011410 ORTHO05D013015 9.1e-10 67.8 110 39.1
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 1.2e-09 67.4 137 30.7
PSO144G0022 Papaver somniferum HOM05D023066 ORTHO05D037272 2.0e-09 66.6 144 29.2
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 2.0e-09 66.6 146 29.5
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 2.7e-09 66.2 148 30.4
CAN.G111.36 Capsicum annuum HOM05D011410 ORTHO05D013015 3.5e-09 65.9 145 30.3
Ciclev10010801m.g Citrus clementina HOM05D009438 ORTHO05D001819 3.5e-09 65.9 146 31.5
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 3.5e-09 65.9 154 30.5
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 4.5e-09 65.5 144 29.2
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 5.9e-09 65.1 136 30.9
Rhsim07G0137900 Rhododendron simsii HOM05D009438 ORTHO05D010870 7.7e-09 64.7 145 28.3
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.0e-08 64.3 147 29.9
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.0e-08 64.3 147 29.9
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.0e-08 64.3 147 29.9
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.0e-08 64.3 122 28.7
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 1.0e-08 64.3 139 30.9
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-08 63.2 150 29.3
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.9e-08 62.8 128 30.5
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-08 62.8 146 28.8
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-08 62.4 150 29.3
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-08 62.0 150 28.7
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-08 61.6 150 30.7
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-08 61.6 150 30.7
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 6.5e-08 61.6 149 27.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.5e-08 61.6 149 29.5
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 8.5e-08 61.2 150 26.0
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.2 128 28.9
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.2 128 28.9
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.5e-08 61.2 128 28.9
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 8.5e-08 61.2 149 27.5
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 8.5e-08 61.2 112 33.0
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 8.5e-08 61.2 112 33.0
Rhsim07G0138100 Rhododendron simsii HOM05D009438 ORTHO05D010870 8.5e-08 61.2 149 27.5
CAN.G363.37 Capsicum annuum HOM05D009438 ORTHO05D010870 1.1e-07 60.8 144 25.0
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.1e-07 60.8 151 29.8
Rhsim04G0243800 Rhododendron simsii HOM05D031363 ORTHO05D013015 1.1e-07 60.8 146 30.1
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-07 60.5 147 29.3
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-07 60.5 147 28.6
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 1.5e-07 60.5 145 31.7
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-07 60.1 150 30.0
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-07 60.1 147 29.3
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-07 60.1 150 29.3
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-07 60.1 128 28.9
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-07 60.1 128 28.9
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-07 60.1 128 28.9
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-07 60.1 128 28.9
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-07 60.1 128 28.9
Rhsim04G0243500 Rhododendron simsii HOM05D031363 ORTHO05D037310 1.9e-07 60.1 146 30.1
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 1.9e-07 60.1 149 29.5
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.5e-07 59.7 128 28.9
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 3.2e-07 59.3 159 31.4
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-07 58.9 147 29.3
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-07 58.9 147 29.3
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-07 58.9 150 29.3
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 5.5e-07 58.5 145 29.7
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 5.5e-07 58.5 113 34.5
Thecc.04G309600 Theobroma cacao HOM05D008191 ORTHO05D010044 5.5e-07 58.5 142 29.6
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.2e-07 58.2 147 29.3
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 7.2e-07 58.2 149 30.2
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 2.1e-06 56.6 141 28.4
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.7e-06 56.2 120 27.5
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.6e-06 55.8 146 26.0
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 3.6e-06 55.8 149 29.5
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 4.7e-06 55.5 121 29.8
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-06 55.1 150 28.7
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 8.0e-06 54.7 156 27.6
MBI04_g11519_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D005233 8.0e-06 54.7 149 27.5


User provided reference genes

Program Settings