Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.2e-180 636.3 320 100.0
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 7.1e-136 487.6 324 78.1
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.0e-130 469.5 299 79.6
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.9e-125 453.0 322 74.5
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 4.9e-121 438.3 324 70.4
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 1.1e-120 437.2 318 71.7
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 7.1e-120 434.5 316 71.8
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 2.7e-119 432.6 315 71.1
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 1.9e-117 426.4 317 70.7
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.3e-117 425.6 280 77.1
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.6e-116 423.3 292 72.6
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 2.1e-116 422.9 316 69.6
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 3.6e-116 422.2 318 69.2
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 6.2e-116 421.4 272 76.8
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 8.1e-116 421.0 319 70.5
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.4e-115 420.2 317 68.8
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 1.4e-115 420.2 315 69.5
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 3.1e-115 419.1 320 68.1
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 5.3e-115 418.3 319 68.3
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 5.3e-115 418.3 272 76.1
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 6.9e-115 417.9 325 68.9
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 9.0e-115 417.5 280 75.4
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 9.0e-115 417.5 317 69.7
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 2.6e-114 416.0 239 84.1
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 5.8e-114 414.8 321 67.9
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 5.8e-114 414.8 319 67.7
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 5.8e-114 414.8 312 67.9
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 5.8e-114 414.8 315 68.3
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 9.9e-114 414.1 315 69.5
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 1.7e-113 413.3 316 69.6
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.7e-113 413.3 307 69.1
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.2e-113 412.9 267 77.2
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 4.9e-113 411.8 313 69.3
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 6.4e-113 411.4 306 70.6
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 8.4e-113 411.0 239 83.3
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.1e-112 410.6 308 69.2
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 1.9e-112 409.8 322 66.5
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 7.1e-112 407.9 243 80.7
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 9.3e-112 407.5 314 67.5
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.2e-111 407.1 241 81.3
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 4.6e-111 405.2 283 70.7
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 6.0e-111 404.8 246 78.0
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 6.0e-111 404.8 265 76.2
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 7.9e-111 404.4 246 78.0
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 7.9e-111 404.4 246 77.6
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 1.0e-110 404.1 309 66.7
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.3e-110 403.7 246 78.0
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.3e-110 403.7 246 78.0
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.3e-110 403.7 246 78.0
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 3.9e-110 402.1 238 81.1
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 3.9e-110 402.1 294 69.7
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 6.7e-110 401.4 278 70.9
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 6.7e-110 401.4 291 69.4
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 6.7e-110 401.4 246 78.9
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 6.7e-110 401.4 319 66.1
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 6.7e-110 401.4 319 66.1
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 8.7e-110 401.0 238 79.8
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 8.7e-110 401.0 320 64.7
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 1.5e-109 400.2 243 79.0
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 3.3e-109 399.1 307 68.1
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 4.3e-109 398.7 238 79.4
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 4.3e-109 398.7 309 67.0
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 4.3e-109 398.7 283 72.4
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 4.3e-109 398.7 240 80.8
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 5.6e-109 398.3 285 70.9
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 1.3e-108 397.1 230 83.0
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 8.1e-108 394.4 282 69.1
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 1.1e-107 394.0 282 69.9
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 1.4e-107 393.7 320 66.6
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 3.1e-107 392.5 281 68.7
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 4.0e-107 392.1 230 81.7
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 5.8e-106 388.3 227 83.7
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 7.6e-106 387.9 269 73.6
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 1.3e-105 387.1 227 82.8
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.7e-105 386.7 285 66.7
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 3.8e-105 385.6 286 69.6
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 4.9e-105 385.2 238 79.0
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.4e-104 383.6 230 81.3
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.3e-102 377.1 239 77.8
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 6.7e-102 374.8 236 75.8
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 8.7e-102 374.4 308 64.6
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 1.9e-101 373.2 240 74.2
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 2.1e-100 369.8 271 69.4
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 2.4e-99 366.3 273 71.1
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 3.4e-98 362.5 272 71.3
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 1.7e-97 360.1 283 66.4
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 5.0e-97 358.6 239 70.7
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 9.3e-96 354.4 319 59.2
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 2.7e-95 352.8 310 61.6
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 2.3e-94 349.7 234 73.5
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 2.2e-92 343.2 254 66.9
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 8.5e-89 331.3 241 68.5
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 7.9e-87 324.7 241 68.5
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 1.1e-85 320.9 259 62.2
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 2.6e-82 309.7 209 75.6
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.8e-78 297.0 254 60.2
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 3.0e-78 296.2 249 64.7
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 4.5e-74 282.3 193 73.1
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 1.3e-73 280.8 182 75.3
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 7.2e-72 275.0 221 67.0
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.7e-65 253.8 312 49.7
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 1.3e-57 227.6 201 63.2
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 3.8e-57 226.1 233 51.9
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 2.5e-56 223.4 208 59.6
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 7.8e-50 201.8 119 84.0
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.5e-48 197.6 113 81.4
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.2e-47 194.5 115 78.3
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 3.5e-42 176.4 106 80.2
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 1.7e-41 174.1 233 44.2
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 1.9e-32 144.1 221 41.6
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.4e-30 137.9 77 83.1
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 1.9e-19 100.9 210 34.8
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 7.8e-18 95.5 211 34.6
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 8.1e-15 85.5 63 68.3
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 3.3e-08 63.5 43 69.8
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 1.6e-07 61.2 205 29.8
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 6.2e-07 59.3 33 69.7


User provided reference genes

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