Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 6.3e-275 950.3 526 100.0
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 6.3e-174 614.8 570 64.4
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 7.0e-165 584.7 543 66.3
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 7.2e-154 548.1 541 62.7
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.7e-142 510.4 529 59.9
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 4.9e-142 508.8 552 60.3
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 2.4e-141 506.5 528 60.0
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 9.2e-141 504.6 534 59.2
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 2.3e-139 500.0 552 59.6
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 3.0e-139 499.6 526 59.5
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 1.5e-138 497.3 533 57.0
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.8e-136 490.3 542 58.5
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 2.3e-136 490.0 517 58.4
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.2e-135 487.6 568 54.0
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.9e-133 480.3 535 57.8
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 4.1e-133 479.2 543 57.6
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.1e-132 476.9 546 56.4
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.7e-131 473.8 541 56.0
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 2.1e-129 466.8 520 55.4
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 2.8e-129 466.5 542 55.5
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 2.0e-127 460.3 537 55.7
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 4.4e-127 459.1 551 56.6
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.7e-126 457.2 531 56.5
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.4e-125 454.1 543 56.0
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 5.4e-125 452.2 520 56.3
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.2e-124 451.1 533 54.8
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 1.6e-124 450.7 537 55.1
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 4.6e-124 449.1 537 54.7
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.3e-123 447.6 534 54.1
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.7e-123 447.2 516 56.2
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.9e-122 443.7 504 54.6
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.9e-122 443.7 527 55.8
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.8e-121 439.9 525 55.8
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-119 434.5 525 53.0
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 9.9e-119 431.4 503 54.1
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 3.8e-118 429.5 537 53.8
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.9e-118 429.1 512 53.7
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.4e-117 427.6 544 53.1
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 1.9e-117 427.2 520 54.4
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.2e-117 426.4 507 56.8
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 3.2e-117 426.4 512 53.3
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.2e-116 424.5 534 50.9
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 2.1e-116 423.7 532 51.1
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.7e-116 423.3 512 52.1
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 3.5e-116 422.9 565 52.4
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.6e-116 422.5 539 51.8
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 7.8e-116 421.8 559 51.5
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 7.8e-116 421.8 512 52.9
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 2.3e-115 420.2 540 51.5
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 6.6e-115 418.7 537 51.6
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 3.3e-114 416.4 533 53.5
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 5.6e-114 415.6 529 51.2
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 9.6e-114 414.8 525 51.4
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 3.6e-113 412.9 540 53.3
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.1e-112 411.4 531 53.1
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 6.9e-112 408.7 534 50.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 4.4e-111 406.0 535 50.8
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 4.4e-111 406.0 525 50.7
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 5.8e-111 405.6 543 52.1
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 9.9e-111 404.8 535 48.2
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.3e-110 404.4 557 50.6
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 2.2e-110 403.7 533 50.3
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 3.8e-110 402.9 519 50.5
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 3.8e-110 402.9 514 50.4
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.9e-109 400.6 511 53.4
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 4.2e-109 399.4 538 50.0
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 4.2e-109 399.4 548 51.8
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 9.3e-109 398.3 537 49.7
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 9.3e-109 398.3 537 49.9
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.7e-107 394.0 543 50.3
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 6.6e-107 392.1 540 51.7
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.1e-106 391.3 529 50.9
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.9e-106 390.6 554 47.7
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.5e-106 390.2 529 50.5
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 4.3e-106 389.4 524 50.0
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 9.6e-106 388.3 514 49.4
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 1.6e-105 387.5 552 47.6
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 2.1e-105 387.1 533 48.8
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 2.1e-105 387.1 535 48.4
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 4.8e-105 386.0 510 49.0
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 4.8e-105 386.0 542 50.2
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 4.8e-105 386.0 530 53.0
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 1.1e-104 384.8 552 47.6
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 1.1e-104 384.8 493 51.3
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 1.4e-104 384.4 500 52.0
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 4.0e-104 382.9 552 47.1
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 4.0e-104 382.9 565 47.1
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 5.3e-104 382.5 538 50.0
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 6.9e-104 382.1 537 49.0
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.0e-104 381.7 513 50.1
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 1.2e-103 381.3 517 48.2
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 2.0e-103 380.6 531 48.2
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 2.6e-103 380.2 517 47.8
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 4.5e-103 379.4 530 47.9
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 4.5e-103 379.4 530 47.9
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 9.9e-103 378.3 622 46.0
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.7e-102 377.5 537 49.0
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 2.2e-102 377.1 530 49.4
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 1.8e-99 367.5 525 46.1
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 1.9e-98 364.0 539 49.2
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 4.3e-98 362.8 503 49.7
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 7.4e-98 362.1 558 46.1
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 9.6e-98 361.7 503 48.9
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 1.3e-97 361.3 551 48.5
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 1.1e-96 358.2 422 56.2
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.1e-96 358.2 527 45.5
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 3.1e-96 356.7 495 48.9
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 4.0e-96 356.3 515 47.0
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.2e-95 354.8 370 59.2
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 3.4e-95 353.2 527 45.4
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 2.2e-94 350.5 379 53.6
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.9e-94 350.1 510 48.8
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 8.4e-94 348.6 371 60.4
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 8.4e-94 348.6 522 45.0
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 4.2e-93 346.3 530 45.8
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 1.6e-92 344.4 524 45.0
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 2.1e-92 344.0 533 46.3
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 6.0e-92 342.4 537 46.4
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 1.0e-91 341.7 379 56.5
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 1.8e-91 340.9 542 46.5
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.9e-90 337.4 520 47.7
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 1.3e-89 334.7 508 44.9
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 5.0e-86 322.8 532 45.3
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 8.4e-86 322.0 309 65.4
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 4.6e-84 316.2 540 42.6
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.3e-83 314.7 541 44.0
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 9.7e-82 308.5 442 50.2
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 1.1e-80 305.1 383 49.6
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 9.0e-80 302.0 530 41.1
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.9e-78 297.0 566 42.0
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 1.6e-76 291.2 536 42.7
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.0e-75 288.5 487 41.7
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 5.1e-75 286.2 396 44.7
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 3.3e-74 283.5 518 40.7
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 5.7e-74 282.7 496 41.7
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 2.9e-70 270.4 285 58.2
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 4.7e-68 263.1 387 45.7
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.0e-67 260.4 420 44.0
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.0e-59 235.3 257 61.1
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 4.1e-56 223.4 394 39.8
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 5.3e-56 223.0 395 38.7
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 8.5e-54 215.7 331 44.4
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 9.1e-48 195.7 389 35.5
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 2.2e-46 191.0 244 53.3
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.1e-45 188.7 444 35.6
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.2e-45 186.8 389 35.2
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.6e-44 184.9 389 35.2
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 3.0e-43 180.6 443 34.5
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.0e-39 167.9 475 32.6
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 8.9e-35 152.5 209 53.1
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.2e-34 152.1 314 36.9
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 2.0e-34 151.4 197 49.2
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 1.4e-32 145.2 516 28.9
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.4e-32 144.4 205 42.0
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 6.6e-30 136.3 307 32.6
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 8.6e-30 136.0 311 35.0
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.9e-29 134.8 278 37.8
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 5.8e-26 123.2 319 34.2
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 2.9e-25 120.9 167 43.7
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 1.1e-24 119.0 301 33.9
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 2.4e-24 117.9 196 38.3
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 1.6e-23 115.2 108 63.9
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.3e-22 112.1 131 48.1
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 3.9e-22 110.5 244 39.8
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.6e-22 109.8 126 53.2
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.6e-20 105.1 183 43.7
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.1e-20 104.8 128 47.7
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 1.8e-19 101.7 91 57.1
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 4.0e-19 100.5 209 43.1
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 2.5e-13 81.3 62 67.7
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 5.2e-11 73.6 84 53.6
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 2.0e-10 71.6 67 50.7
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.4e-10 70.9 94 44.7
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.9e-08 65.1 71 50.7
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 2.7e-07 61.2 152 31.6
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 1.7e-06 58.5 41 68.3
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 8.6e-06 56.2 418 21.3


User provided reference genes

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