Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 0.0e+00 1280.0 651 100.0
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 2.9e-221 772.3 690 63.5
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 2.0e-217 759.6 687 61.0
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 1.3e-205 720.3 537 70.6
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.1e-191 674.1 676 57.0
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 1.5e-188 663.7 651 57.5
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 6.8e-186 654.8 637 55.9
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 2.0e-185 653.3 707 53.9
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 5.8e-185 651.7 684 53.2
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 8.3e-184 647.9 684 53.1
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.1e-183 647.5 689 54.7
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 1.4e-183 647.1 686 54.1
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 7.8e-182 641.3 602 58.3
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 1.9e-180 636.7 646 53.7
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.6e-179 633.6 612 57.2
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 3.6e-179 632.5 617 55.9
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 4.7e-179 632.1 619 56.2
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 4.7e-179 632.1 683 52.4
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 4.7e-179 632.1 611 54.7
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 6.2e-179 631.7 618 55.8
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 1.1e-178 630.9 634 54.7
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 2.3e-178 629.8 611 56.5
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 2.6e-177 626.3 615 54.3
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 4.4e-177 625.5 611 54.5
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 7.5e-177 624.8 616 55.4
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 2.2e-176 623.2 621 54.6
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 2.2e-176 623.2 683 51.8
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 2.9e-176 622.9 611 54.5
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 2.4e-175 619.8 621 54.1
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 3.2e-175 619.4 683 50.8
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 1.2e-174 617.5 694 52.0
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.6e-174 617.1 695 49.9
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 2.1e-174 616.7 654 52.0
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 3.5e-174 615.9 614 55.5
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 2.3e-173 613.2 617 53.2
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.0e-173 612.8 691 51.5
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.0e-173 612.8 691 51.5
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 6.6e-173 611.7 663 52.0
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.2e-171 607.4 699 51.4
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 3.6e-171 605.9 683 50.2
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.4e-170 604.0 622 53.5
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 1.8e-170 603.6 679 51.4
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 3.1e-170 602.8 685 49.3
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 5.2e-170 602.1 673 51.4
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 6.8e-170 601.7 623 53.3
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 6.8e-170 601.7 698 49.4
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 9.9e-169 597.8 674 51.3
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 8.4e-168 594.7 671 51.1
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 4.1e-167 592.4 654 52.3
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 5.4e-167 592.0 660 51.4
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 7.1e-167 591.7 633 52.0
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 1.2e-166 590.9 678 50.6
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 1.6e-166 590.5 621 53.1
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 4.6e-166 589.0 616 53.6
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 7.8e-166 588.2 623 52.8
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.0e-165 587.8 675 51.0
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 1.9e-164 583.6 676 49.1
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 7.3e-164 581.6 610 54.4
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 2.1e-163 580.1 614 52.4
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 4.7e-163 578.9 677 49.8
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.4e-162 577.4 681 50.1
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 1.8e-162 577.0 623 51.2
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.8e-162 577.0 708 48.0
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.8e-162 577.0 644 51.1
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.0e-161 573.5 610 52.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.4e-161 572.8 658 51.5
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 3.4e-161 572.8 610 52.1
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 7.6e-161 571.6 677 48.7
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.6e-161 571.6 700 48.6
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.3e-160 570.9 591 54.7
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.7e-160 570.5 608 51.5
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 2.9e-160 569.7 649 50.2
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 1.1e-159 567.8 609 51.4
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 1.2e-158 564.3 662 49.2
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.3e-157 560.8 591 52.5
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 3.0e-157 559.7 682 46.6
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 2.8e-155 553.1 627 51.0
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 4.0e-154 549.3 663 46.5
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.0e-153 547.0 662 48.6
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 5.8e-153 545.4 633 49.4
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 9.9e-153 544.7 621 49.4
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.3e-152 544.3 665 46.3
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.7e-152 543.9 666 46.7
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 4.6e-150 535.8 656 46.8
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 4.6e-150 535.8 632 48.6
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 3.0e-149 533.1 517 55.1
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 5.1e-149 532.3 666 46.1
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 5.1e-149 532.3 605 49.9
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 6.7e-149 531.9 645 47.0
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 1.9e-148 530.4 639 47.4
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.5e-148 530.0 642 46.6
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 9.6e-148 528.1 522 53.4
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.1e-147 526.9 584 49.7
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 1.4e-146 524.2 567 52.2
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 2.4e-146 523.5 612 48.2
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 5.3e-146 522.3 642 46.7
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 5.3e-146 522.3 511 53.6
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 9.0e-146 521.5 511 53.8
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 1.2e-145 521.2 640 46.9
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 1.2e-145 521.2 647 46.7
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.5e-145 519.2 676 45.3
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.7e-144 517.3 678 46.2
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 2.9e-144 516.5 511 53.0
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 4.9e-144 515.8 614 47.9
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 4.9e-144 515.8 647 46.1
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.9e-143 513.8 614 47.7
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 5.5e-143 512.3 547 52.7
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 1.6e-142 510.8 540 51.7
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.3e-141 507.7 605 48.4
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.8e-141 507.3 631 45.3
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 8.2e-139 498.4 641 45.2
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 5.3e-138 495.7 455 59.1
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 5.8e-137 492.3 610 46.9
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.8e-133 480.7 644 44.6
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 9.7e-132 474.9 643 44.5
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 2.2e-128 463.8 522 48.3
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 2.5e-124 450.3 587 44.0
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 7.9e-118 428.7 641 39.9
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 2.0e-108 397.5 636 39.9
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 2.1e-102 377.5 639 37.2
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 7.5e-100 369.0 646 36.8
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 9.1e-98 362.1 617 40.4
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 3.6e-94 350.1 408 50.5
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 1.6e-86 324.7 593 36.3
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 6.8e-85 319.3 478 38.3
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 5.7e-84 316.2 416 42.8
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 1.7e-83 314.7 258 58.1
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 6.3e-83 312.8 643 34.1
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 8.3e-83 312.4 667 33.0
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 1.1e-79 302.0 233 62.7
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.7e-75 288.1 304 52.3
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 4.7e-70 270.0 220 60.5
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 8.6e-56 222.6 244 54.1
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 4.3e-47 193.7 123 72.4
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 1.2e-20 105.9 584 23.1
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 4.6e-09 67.4 141 36.9
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 4.8e-06 57.4 124 30.6


User provided reference genes

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