Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.3e-243 845.9 415 100.0
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 7.4e-186 654.1 402 77.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.3e-185 653.3 476 68.9
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 6.1e-164 581.3 411 69.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.0e-163 578.6 403 69.7
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.2e-159 567.0 399 67.9
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.7e-159 565.8 399 67.7
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.0e-158 563.9 403 65.5
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 4.2e-157 558.5 450 62.7
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 7.2e-157 557.8 411 64.5
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 6.1e-156 554.7 391 67.5
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 6.1e-156 554.7 431 65.4
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 6.8e-155 551.2 403 64.5
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 7.5e-154 547.7 398 65.6
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 3.7e-153 545.4 394 65.0
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 8.3e-153 544.3 411 63.5
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.8e-152 543.1 418 62.0
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 5.4e-152 541.6 418 62.4
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.2e-151 540.4 402 64.4
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 4.5e-151 538.5 410 62.4
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 7.7e-151 537.7 420 62.9
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.3e-150 537.0 398 62.8
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.2e-150 536.2 413 62.2
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.2e-150 536.2 398 65.3
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 3.8e-150 535.4 399 65.9
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.8e-150 535.4 411 63.5
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 8.5e-150 534.3 391 64.2
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 4.7e-148 528.5 410 61.5
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.4e-147 526.9 411 62.0
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.4e-147 526.9 399 63.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.3e-147 526.2 382 62.6
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.3e-147 526.2 414 61.8
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.8e-147 524.6 409 62.3
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 6.8e-147 524.6 399 63.9
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.2e-146 523.9 399 61.9
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.5e-146 523.5 382 63.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.0e-146 523.1 403 61.0
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 2.0e-146 523.1 417 60.2
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.0e-146 523.1 409 61.4
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.4e-146 522.3 431 59.2
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 7.5e-146 521.2 395 62.5
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.7e-145 520.0 401 60.8
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.7e-145 520.0 400 62.8
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.8e-145 519.2 397 62.0
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.3e-145 517.7 401 60.6
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.4e-144 516.9 435 58.4
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.4e-144 516.2 397 61.5
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 4.1e-144 515.4 401 60.1
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.1e-144 515.4 397 62.7
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 7.0e-144 514.6 386 60.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.2e-143 513.8 404 60.6
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 2.7e-143 512.7 456 56.6
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 4.5e-143 511.9 403 60.5
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.9e-143 511.5 401 63.1
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.0e-142 510.8 403 60.5
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.9e-142 509.2 384 63.3
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.8e-142 508.8 384 61.7
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.5e-141 506.9 404 60.1
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.9e-141 506.5 397 59.7
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.5e-141 506.1 416 58.4
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.3e-141 505.8 402 59.7
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 9.5e-141 504.2 412 59.0
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-140 503.8 396 59.6
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.2e-140 503.8 398 58.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.2e-140 503.8 439 57.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 4.7e-140 501.9 421 58.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 6.1e-140 501.5 358 65.1
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 8.9e-139 497.7 402 58.2
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.2e-138 497.3 400 59.0
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.0e-138 496.5 400 58.0
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.3e-137 493.8 371 61.7
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 3.5e-135 485.7 403 58.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.0e-131 474.2 413 57.6
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.4e-130 469.2 391 60.6
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.4e-130 468.8 425 55.5
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.7e-129 466.8 357 63.3
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 4.1e-128 462.2 351 63.0
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 2.3e-126 456.4 389 56.6
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.9e-125 453.4 451 51.7
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 8.9e-123 444.5 344 59.0
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.2e-121 439.9 400 55.0
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.2e-121 439.9 415 54.9
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.2e-116 421.8 340 60.6
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.4e-112 409.8 407 50.9
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 3.5e-111 406.0 359 54.0
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.3e-110 403.3 289 67.8
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 6.9e-107 391.7 368 53.8
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 9.9e-106 387.9 307 59.6
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.4e-104 384.0 426 48.8
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 4.6e-95 352.4 254 65.4
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 6.9e-91 338.6 212 79.7
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 4.6e-87 325.9 401 45.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 7.9e-87 325.1 208 70.2
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 2.5e-85 320.1 396 43.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 5.6e-85 318.9 252 61.1
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.1e-84 317.0 252 61.5
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.4e-83 314.3 352 45.2
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 4.2e-80 302.8 429 41.5
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.5e-79 299.7 402 40.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.5e-79 299.7 397 41.8
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.1e-71 273.9 229 59.8
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 9.4e-64 248.4 391 40.2
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 1.0e-62 245.0 178 62.4
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 2.0e-61 240.7 221 54.8
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-58 230.7 212 53.3
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 3.3e-53 213.4 202 50.5
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.2e-50 204.9 158 63.3
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 2.9e-49 200.3 138 67.4
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 2.3e-46 190.7 314 39.2
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 7.0e-43 179.1 294 40.5
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 7.5e-37 159.1 100 71.0
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 4.1e-35 153.3 117 55.6
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.0e-33 148.7 114 56.1
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 3.8e-33 146.7 112 58.9
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 6.8e-30 136.0 160 45.6
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.1e-24 118.6 103 55.3
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 6.8e-22 109.4 122 45.9
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 9.5e-16 89.0 87 52.9
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.4e-11 74.3 113 38.1
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 2.3e-06 57.8 41 63.4


User provided reference genes

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