Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 8.5e-94 347.1 182 100.0
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 5.9e-79 297.7 182 86.3
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 3.5e-71 271.9 176 81.2
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 2.8e-60 235.7 183 72.1
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 1.0e-59 233.8 183 70.5
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 1.4e-59 233.4 183 70.5
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.8e-59 233.0 182 73.1
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 2.6e-58 229.2 184 72.3
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 1.3e-57 226.9 183 68.9
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 8.3e-57 224.2 178 69.1
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 1.4e-56 223.4 189 69.3
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 7.0e-56 221.1 188 68.6
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 9.2e-56 220.7 177 68.9
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 2.0e-55 219.5 183 69.4
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 4.6e-55 218.4 178 68.5
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.1e-53 213.8 188 68.1
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 2.1e-52 209.5 178 65.7
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 1.0e-51 207.2 180 64.4
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 1.4e-51 206.8 126 80.2
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 2.3e-51 206.1 184 65.8
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 3.1e-51 205.7 178 65.7
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 3.1e-51 205.7 178 65.7
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 6.8e-51 204.5 230 56.1
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.2e-50 203.8 183 64.5
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 1.5e-50 203.4 186 63.4
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 1.5e-50 203.4 180 62.2
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 2.0e-50 203.0 187 63.1
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 3.4e-50 202.2 180 63.9
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 4.4e-50 201.8 180 63.9
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 4.4e-50 201.8 184 64.7
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 7.5e-50 201.1 179 61.5
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.3e-49 200.3 184 63.6
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 1.3e-49 200.3 184 63.6
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 3.7e-49 198.7 187 61.5
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 6.4e-49 198.0 183 62.3
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 8.3e-49 197.6 171 69.0
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.1e-48 197.2 184 63.0
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.4e-48 196.8 187 63.6
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 5.4e-48 194.9 180 61.1
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 9.2e-48 194.1 176 61.9
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.2e-47 193.7 183 60.7
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 2.0e-47 193.0 178 61.8
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 3.5e-47 192.2 199 59.8
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 1.0e-46 190.7 185 58.9
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.0e-46 190.7 184 60.3
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 1.3e-46 190.3 182 59.3
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 1.7e-46 189.9 191 62.3
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.3e-46 189.5 179 61.5
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 3.0e-46 189.1 185 60.0
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 3.0e-46 189.1 182 59.9
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.0e-46 189.1 182 62.1
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 3.9e-46 188.7 180 61.1
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 5.0e-46 188.3 191 62.3
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 6.6e-46 188.0 182 61.0
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 6.6e-46 188.0 184 59.8
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 1.1e-45 187.2 180 60.6
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 1.1e-45 187.2 180 60.0
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 1.1e-45 187.2 180 60.0
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 1.5e-45 186.8 180 61.7
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 2.5e-45 186.0 183 59.6
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 4.3e-45 185.3 180 60.6
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 7.3e-45 184.5 180 61.1
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-44 183.7 180 59.4
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 2.1e-44 183.0 177 61.0
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.8e-44 182.6 181 59.1
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 2.8e-44 182.6 187 57.2
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 3.6e-44 182.2 188 58.5
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 3.6e-44 182.2 188 60.1
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 4.7e-44 181.8 179 60.9
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 6.2e-44 181.4 184 57.6
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 8.1e-44 181.0 185 57.3
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 8.1e-44 181.0 182 59.9
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.4e-43 180.3 180 60.0
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.4e-43 180.3 180 60.0
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 1.8e-43 179.9 181 60.8
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 1.8e-43 179.9 174 62.1
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 2.3e-43 179.5 181 61.3
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 3.1e-43 179.1 183 58.5
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 3.1e-43 179.1 179 58.7
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.1e-43 179.1 179 58.7
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 4.0e-43 178.7 180 59.4
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 6.8e-43 177.9 186 56.5
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 8.9e-43 177.6 197 55.3
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 1.5e-42 176.8 184 57.1
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 1.5e-42 176.8 177 58.8
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 5.8e-42 174.9 181 60.2
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 7.5e-42 174.5 178 56.2
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 3.7e-41 172.2 179 58.7
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 6.4e-41 171.4 176 59.1
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 2.4e-40 169.5 118 75.4
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 2.4e-40 169.5 177 57.6
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 4.1e-40 168.7 202 53.5
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 4.1e-40 168.7 196 57.1
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 5.4e-40 168.3 196 56.1
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 7.1e-40 167.9 182 54.9
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 1.2e-39 167.2 181 56.9
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.5e-37 160.2 188 52.1
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 7.3e-37 157.9 192 49.5
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 4.7e-36 155.2 196 51.5
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 5.8e-34 148.3 108 68.5
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 1.3e-33 147.1 185 50.8
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 4.9e-33 145.2 127 60.6
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 3.2e-32 142.5 191 52.9
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 7.1e-32 141.4 132 63.6
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 1.2e-31 140.6 122 66.4
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 1.6e-31 140.2 186 50.0
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.5e-29 133.7 192 46.4
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 3.3e-29 132.5 184 47.3
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 5.6e-29 131.7 191 47.6
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 7.3e-29 131.3 92 76.1
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.4e-27 126.3 144 55.6
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 2.4e-27 126.3 186 49.5
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.2e-26 124.0 127 50.4
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 2.0e-26 123.2 249 40.6
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 9.9e-26 120.9 94 69.1
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 9.9e-26 120.9 134 51.5
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 1.3e-25 120.6 159 47.8
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 4.9e-25 118.6 125 56.0
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 6.4e-25 118.2 125 55.2
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 8.4e-25 117.9 93 69.9
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 1.4e-24 117.1 145 49.7
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 5.4e-24 115.2 89 74.2
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.1e-24 114.8 162 45.1
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 6.6e-22 108.2 97 64.9
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 4.9e-17 92.0 91 52.7
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 4.9e-17 92.0 123 50.4
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 1.3e-14 84.0 81 61.7
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 4.3e-13 79.0 81 56.8
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 4.3e-13 79.0 81 56.8
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 7.4e-13 78.2 89 48.3
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 5.3e-11 72.0 146 40.4
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 2.6e-10 69.7 101 43.6
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 3.4e-10 69.3 62 59.7
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 7.6e-10 68.2 93 44.1
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.6e-10 68.2 61 63.9
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 1.6e-07 60.5 91 41.8
SHI06070 Sapria himalayana HOM05D005654 ORTHO05D006438 6.7e-06 55.1 85 40.0


User provided reference genes

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