Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02456 Erythranthe guttata HOM05D000084 ORTHO05D035100 8.3e-39 163.3 87 100.0
Oeu001979.1 Olea europaea HOM05D000084 ORTHO05D005850 5.6e-27 124.0 83 77.1
SalBow6G0339 Salvia bowleyana HOM05D000084 ORTHO05D005850 1.2e-26 122.9 83 78.3
Oeu028355.1 Olea europaea HOM05D000084 ORTHO05D005850 1.7e-23 112.5 85 71.8
Dinv16427 Davidia involucrata HOM05D000084 ORTHO05D005850 1.7e-20 102.4 88 62.5
Cc07_g16610 Coffea canephora HOM05D000084 ORTHO05D005850 5.1e-20 100.9 85 65.9
Dinv19456 Davidia involucrata HOM05D000084 ORTHO05D005850 8.6e-20 100.1 88 60.2
CSS0045988 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D005850 9.5e-19 96.7 89 57.3
HanXRQChr15g0489841 Helianthus annuus HOM05D000084 ORTHO05D005850 1.4e-17 92.8 65 66.2
Lj4A861T44 Lonicera japonica HOM05D000084 ORTHO05D005850 1.8e-17 92.4 82 58.5
DCAR_001385 Daucus carota HOM05D000084 ORTHO05D005850 5.2e-17 90.9 88 58.0
Sopen04g022840 Solanum pennellii HOM05D000084 ORTHO05D005850 4.4e-16 87.8 87 58.6
Manes.12G145300 Manihot esculenta HOM05D000084 ORTHO05D005850 4.3e-11 71.2 67 55.2
Atru.chr4.725 Acer truncatum HOM05D000084 ORTHO05D005850 5.6e-11 70.9 67 50.7
Potri.007G077600 Populus trichocarpa HOM05D000084 ORTHO05D005850 3.6e-10 68.2 84 52.4
COL.COLO4_03469 Corchorus olitorius HOM05D000084 ORTHO05D005850 6.2e-10 67.4 80 50.0
Medtr8g092290 Medicago truncatula HOM05D000084 ORTHO05D005850 6.2e-10 67.4 61 57.4
Ca_17675_v3 Cicer arietinum L. HOM05D000084 ORTHO05D005850 1.1e-09 66.6 61 57.4
Ciclev10027342m.g Citrus clementina HOM05D000084 ORTHO05D005850 2.4e-09 65.5 87 43.7
Psat7g049920 Pisum sativum HOM05D000084 ORTHO05D005850 3.1e-09 65.1 61 55.7
TPR.G2213 Trifolium pratense HOM05D000084 ORTHO05D005850 3.1e-09 65.1 61 55.7
Cpa.g.sc72.55 Carica papaya HOM05D001080 ORTHO05D005850 5.3e-09 64.3 61 52.5
CiPaw.03G131900 Carya illinoinensis HOM05D000084 ORTHO05D005850 1.5e-08 62.8 80 48.8
Gohir.A12G092300 Gossypium hirsutum HOM05D000084 ORTHO05D005850 4.4e-08 61.2 84 47.6
Thecc.01G116800 Theobroma cacao HOM05D000084 ORTHO05D005850 7.6e-08 60.5 61 52.5
Cfa002783 Carpinus fangiana HOM05D000084 ORTHO05D005850 9.9e-08 60.1 62 53.2
Duzib147G0950 Durio zibethinus HOM05D000084 ORTHO05D035100 9.9e-08 60.1 83 43.4
Gohir.D12G093300 Gossypium hirsutum HOM05D000084 ORTHO05D005850 9.9e-08 60.1 84 46.4
TWI31G0596 Tripterygium wilfordii HOM05D000084 ORTHO05D005850 1.7e-07 59.3 60 51.7
PGR102G1568 Punica granatum HOM05D000084 ORTHO05D005850 2.9e-07 58.5 64 46.9
TAR628G0942 Trochodendron aralioides HOM05D000084 ORTHO05D005850 2.9e-07 58.5 86 44.2
arahy.Tifrunner.gnm1.ann1.50DUHM Arachis hypogaea HOM05D000084 ORTHO05D005850 3.8e-07 58.2 66 50.0
arahy.Tifrunner.gnm1.ann1.GD0W4L Arachis hypogaea HOM05D000084 ORTHO05D005850 3.8e-07 58.2 66 50.0
Gorai.008G101200 Gossypium raimondii HOM05D000084 ORTHO05D005850 3.8e-07 58.2 84 46.4
Duzib187G1841 Durio zibethinus HOM05D000084 ORTHO05D005850 4.9e-07 57.8 80 45.0
Potri.005G086900 Populus trichocarpa HOM05D000084 ORTHO05D005850 8.4e-07 57.0 65 49.2
Lj4g0023923 Lotus japonicus HOM05D000084 ORTHO05D005850 1.1e-06 56.6 78 44.9
Duzib264G1256 Durio zibethinus HOM05D000084 ORTHO05D005850 2.4e-06 55.5 57 50.9


User provided reference genes

Program Settings